RNA–Protein interactions for RNA: ENST00000529539.5

CHID1-216, Transcript of chitinase domain containing 1, humanhuman

TSL 2

Gene CHID1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-216ENST00000529539 RTKN2Q8IZC4 609 aa27.7■■■□□ 2.02
CHID1-216ENST00000529539 XAGE3Q8WTP9 111 aa27.7■■■□□ 2.02
CHID1-216ENST00000529539 NCBP3Q53F19 620 aaKnown RBP27.69■■■□□ 2.02
CHID1-216ENST00000529539 C16orf71Q8IYS4 520 aaPredicted RBP27.69■■■□□ 2.02
CHID1-216ENST00000529539 NECTIN2Q92692 538 aa27.69■■■□□ 2.02
CHID1-216ENST00000529539 CHPF2Q9P2E5 772 aa27.69■■■□□ 2.02
CHID1-216ENST00000529539 SLC10A5Q5PT55 438 aa27.68■■■□□ 2.02
CHID1-216ENST00000529539 DUSP27Q5VZP5 1158 aa27.68■■■□□ 2.02
CHID1-216ENST00000529539 DPY19L2Q6NUT2 758 aa27.68■■■□□ 2.02
CHID1-216ENST00000529539 UTP14AQ9BVJ6 771 aaKnown RBP27.68■■■□□ 2.02
CHID1-216ENST00000529539 CHMP4AQ9BY43 222 aa27.68■■■□□ 2.02
CHID1-216ENST00000529539 ANKRD36CQ5JPF3 1778 aa27.68■■■□□ 2.02
CHID1-216ENST00000529539 ANP32CO43423 234 aa27.67■■■□□ 2.02
CHID1-216ENST00000529539 TCIRG1Q13488 830 aa27.67■■■□□ 2.02
CHID1-216ENST00000529539 CCDC27Q2M243 656 aa27.67■■■□□ 2.02
CHID1-216ENST00000529539 CC2D2BQ6DHV5 1058 aa27.67■■■□□ 2.02
CHID1-216ENST00000529539 RRAGCQ9HB90 399 aa27.67■■■□□ 2.02
CHID1-216ENST00000529539 HYPKQ9NX55 129 aa27.67■■■□□ 2.02
CHID1-216ENST00000529539 FKBP4Q02790 459 aaKnown RBP eCLIP27.66■■■□□ 2.02
CHID1-216ENST00000529539 AIMP1Q12904 312 aaKnown RBP27.66■■■□□ 2.02
CHID1-216ENST00000529539 GRIPAP1Q4V328 841 aa27.66■■■□□ 2.02
CHID1-216ENST00000529539 CCDC184Q52MB2 194 aa27.66■■■□□ 2.02
CHID1-216ENST00000529539 RPGRQ92834 1020 aaKnown RBP27.66■■■□□ 2.02
CHID1-216ENST00000529539 CRAMP1Q96RY5 1269 aa27.66■■■□□ 2.02
CHID1-216ENST00000529539 VEGFAP15692 232 aaPredicted RBP27.65■■■□□ 2.02
CHID1-216ENST00000529539 FSTL1Q12841 308 aa27.65■■■□□ 2.02
CHID1-216ENST00000529539 PLBD2Q8NHP8 589 aa27.65■■■□□ 2.02
CHID1-216ENST00000529539 NLRP3Q96P20 1036 aa27.65■■■□□ 2.02
CHID1-216ENST00000529539 NLRP10Q86W26 655 aa27.64■■■□□ 2.02
CHID1-216ENST00000529539 RBM17Q96I25 401 aaKnown RBP27.64■■■□□ 2.02
CHID1-216ENST00000529539 ANKRD13DQ6ZTN6 518 aa27.63■■■□□ 2.01
CHID1-216ENST00000529539 WDR90Q96KV7 1748 aa27.62■■■□□ 2.01
CHID1-216ENST00000529539 SNED1Q8TER0 1413 aa27.61■■■□□ 2.01
CHID1-216ENST00000529539 PSMD1Q99460 953 aa27.61■■■□□ 2.01
CHID1-216ENST00000529539 MRS2Q9HD23 443 aa27.61■■■□□ 2.01
CHID1-216ENST00000529539 APLP1P51693 650 aa27.6■■■□□ 2.01
CHID1-216ENST00000529539 TRMT112Q9UI30 125 aaKnown RBP27.58■■■□□ 2.01
CHID1-216ENST00000529539 SH3TC1Q8TE82 1336 aa27.58■■■□□ 2.01
CHID1-216ENST00000529539 TRIM28Q13263 835 aaKnown RBP27.57■■■□□ 2
CHID1-216ENST00000529539 SMC1BQ8NDV3 1235 aa27.57■■■□□ 2
CHID1-216ENST00000529539 ISCA1Q9BUE6 129 aa27.57■■■□□ 2
CHID1-216ENST00000529539 IL16Q14005 1332 aa27.57■■■□□ 2
CHID1-216ENST00000529539 OLFM4Q6UX06 510 aa27.56■■■□□ 2
CHID1-216ENST00000529539 C3orf67Q6ZVT6 689 aa27.56■■■□□ 2
CHID1-216ENST00000529539 WWC1Q8IX03 1113 aa27.56■■■□□ 2
CHID1-216ENST00000529539 POTECB2RU33 542 aa27.55■■■□□ 2
CHID1-216ENST00000529539 SYNE4Q8N205 404 aa27.55■■■□□ 2
CHID1-216ENST00000529539 C8orf58Q8NAV2 365 aa27.55■■■□□ 2
CHID1-216ENST00000529539 ZNF277Q9NRM2 450 aaPredicted RBP27.55■■■□□ 2
CHID1-216ENST00000529539 PPEF1O14829 653 aaPredicted RBP27.54■■■□□ 2
CHID1-216ENST00000529539 IARSP41252 1262 aaKnown RBP27.54■■■□□ 2
CHID1-216ENST00000529539 CCDC30Q5VVM6 783 aa27.54■■■□□ 2
CHID1-216ENST00000529539 BBOX1O75936 387 aa27.53■■■□□ 2
CHID1-216ENST00000529539 GOLGA2Q08379 1002 aa27.53■■■□□ 2
CHID1-216ENST00000529539 L3MBTL3Q96JM7 780 aaPredicted RBP27.53■■■□□ 2
CHID1-216ENST00000529539 TMX4Q9H1E5 349 aaPredicted RBP27.53■■■□□ 2
CHID1-216ENST00000529539 ELL2O00472 640 aaPredicted RBP27.52■■■□□ 2
CHID1-216ENST00000529539 ATP6V0A2Q9Y487 856 aa27.52■■■□□ 2
CHID1-216ENST00000529539 DDNO94850 711 aaPredicted RBP27.51■■□□□ 1.99
CHID1-216ENST00000529539 VPS33BQ9H267 617 aa27.51■■□□□ 1.99
CHID1-216ENST00000529539 LAMB2P55268 1798 aa27.5■■□□□ 1.99
CHID1-216ENST00000529539 ABCC4O15439 1325 aa27.5■■□□□ 1.99
CHID1-216ENST00000529539 IQCA1LA6NCM1 817 aa27.5■■□□□ 1.99
CHID1-216ENST00000529539 FZD9O00144 591 aa27.5■■□□□ 1.99
CHID1-216ENST00000529539 HCLS1P14317 486 aaPredicted RBP27.5■■□□□ 1.99
CHID1-216ENST00000529539 RIC3Q7Z5B4 369 aa27.5■■□□□ 1.99
CHID1-216ENST00000529539 DDX46Q7L014 1031 aaKnown RBP27.49■■□□□ 1.99
CHID1-216ENST00000529539 TMC4Q7Z404 712 aa27.49■■□□□ 1.99
CHID1-216ENST00000529539 JDP2Q8WYK2 163 aa27.49■■□□□ 1.99
CHID1-216ENST00000529539 PHAXQ9H814 394 aaKnown RBP27.49■■□□□ 1.99
CHID1-216ENST00000529539 DDX58O95786 925 aaKnown RBP27.48■■□□□ 1.99
CHID1-216ENST00000529539 SCN4AP35499 1836 aa27.48■■□□□ 1.99
CHID1-216ENST00000529539 ATP5J2-PTCD1G3V325 749 aa27.47■■□□□ 1.99
CHID1-216ENST00000529539 HSP90B1P14625 803 aaKnown RBP27.47■■□□□ 1.99
CHID1-216ENST00000529539 SF3B3Q15393 1217 aaKnown RBP27.47■■□□□ 1.99
CHID1-216ENST00000529539 WDR63Q8IWG1 891 aa27.47■■□□□ 1.99
CHID1-216ENST00000529539 SP8Q8IXZ3 490 aa27.47■■□□□ 1.99
CHID1-216ENST00000529539 TSPYL6Q8N831 410 aa27.47■■□□□ 1.99
CHID1-216ENST00000529539 GRAPQ13588 217 aa27.46■■□□□ 1.99
CHID1-216ENST00000529539 GRAPLQ8TC17 118 aaPredicted RBP27.46■■□□□ 1.99
CHID1-216ENST00000529539 TSR2Q969E8 191 aaKnown RBP27.46■■□□□ 1.99
CHID1-216ENST00000529539 DDX60Q8IY21 1712 aaKnown RBP27.45■■□□□ 1.99
CHID1-216ENST00000529539 CCDC191Q8NCU4 936 aa27.45■■□□□ 1.98
CHID1-216ENST00000529539 SUPT20HQ8NEM7 779 aa27.45■■□□□ 1.98
CHID1-216ENST00000529539 FAM89AQ96GI7 184 aa27.45■■□□□ 1.98
CHID1-216ENST00000529539 RTFDC1Q9BY42 306 aaPredicted RBP27.45■■□□□ 1.98
CHID1-216ENST00000529539 ZNF541Q9H0D2 1346 aa27.44■■□□□ 1.98
CHID1-216ENST00000529539 GPC2Q8N158 579 aa27.44■■□□□ 1.98
CHID1-216ENST00000529539 DNAJC5GQ8N7S2 189 aa27.44■■□□□ 1.98
CHID1-216ENST00000529539 ZBTB38Q8NAP3 1195 aaPredicted RBP27.44■■□□□ 1.98
CHID1-216ENST00000529539 STK31Q9BXU1 1019 aa27.44■■□□□ 1.98
CHID1-216ENST00000529539 TWISTNBQ3B726 338 aaPredicted RBP27.43■■□□□ 1.98
CHID1-216ENST00000529539 LARGE2Q8N3Y3 721 aa27.42■■□□□ 1.98
CHID1-216ENST00000529539 METTL22Q9BUU2 404 aaPredicted RBP27.42■■□□□ 1.98
CHID1-216ENST00000529539 IRS4O14654 1257 aaPredicted RBP27.41■■□□□ 1.98
CHID1-216ENST00000529539 TCERG1O14776 1098 aaKnown RBP27.41■■□□□ 1.98
CHID1-216ENST00000529539 EIF6P56537 245 aaKnown RBP27.41■■□□□ 1.98
CHID1-216ENST00000529539 TAF1DQ9H5J8 278 aaPredicted RBP27.41■■□□□ 1.98
CHID1-216ENST00000529539 CHADLQ6NUI6 762 aa27.4■■□□□ 1.98
CHID1-216ENST00000529539 MYD88Q99836 296 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms