RNA–Protein interactions for RNA: ENST00000529505.1

SMIM19-208, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 920 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-208ENST00000529505 SPINK5Q9NQ38 1064 aaPredicted RBP27.07■■□□□ 1.92
SMIM19-208ENST00000529505 NIP7Q9Y221 180 aaKnown RBP eCLIP27.07■■□□□ 1.92
SMIM19-208ENST00000529505 KLRG2A4D1S0 409 aaPredicted RBP27.06■■□□□ 1.92
SMIM19-208ENST00000529505 FSTL1Q12841 308 aa27.06■■□□□ 1.92
SMIM19-208ENST00000529505 PRPF40BQ6NWY9 871 aaKnown RBP27.06■■□□□ 1.92
SMIM19-208ENST00000529505 TPTE2Q6XPS3 522 aa27.05■■□□□ 1.92
SMIM19-208ENST00000529505 ZBTB3Q9H5J0 574 aa27.05■■□□□ 1.92
SMIM19-208ENST00000529505 ZNF219Q9P2Y4 722 aaPredicted RBP27.05■■□□□ 1.92
SMIM19-208ENST00000529505 WDR90Q96KV7 1748 aa27.04■■□□□ 1.92
SMIM19-208ENST00000529505 ZNF34Q8IZ26 560 aa27.04■■□□□ 1.92
SMIM19-208ENST00000529505 NUP98P52948 1817 aa27.04■■□□□ 1.92
SMIM19-208ENST00000529505 AIMP1Q12904 312 aaKnown RBP27.03■■□□□ 1.92
SMIM19-208ENST00000529505 HSP90AB3PQ58FF7 597 aa27.03■■□□□ 1.92
SMIM19-208ENST00000529505 ANKRD13DQ6ZTN6 518 aa27.03■■□□□ 1.92
SMIM19-208ENST00000529505 E9PSI1 815 aa27.02■■□□□ 1.92
SMIM19-208ENST00000529505 VAMP4O75379 141 aa27.02■■□□□ 1.92
SMIM19-208ENST00000529505 SOGA3Q5TF21 947 aa27.02■■□□□ 1.92
SMIM19-208ENST00000529505 PLBD2Q8NHP8 589 aa27.02■■□□□ 1.92
SMIM19-208ENST00000529505 C7orf43Q8WVR3 580 aa27.02■■□□□ 1.92
SMIM19-208ENST00000529505 TAOK3Q9H2K8 898 aa27.02■■□□□ 1.92
SMIM19-208ENST00000529505 NPR1P16066 1061 aa27.01■■□□□ 1.91
SMIM19-208ENST00000529505 EXOSC9Q06265 439 aaKnown RBP27.01■■□□□ 1.91
SMIM19-208ENST00000529505 DNAJC5GQ8N7S2 189 aa27.01■■□□□ 1.91
SMIM19-208ENST00000529505 STK31Q9BXU1 1019 aa27■■□□□ 1.91
SMIM19-208ENST00000529505 NYXQ9GZU5 481 aa27■■□□□ 1.91
SMIM19-208ENST00000529505 VEGFAP15692 232 aaPredicted RBP26.99■■□□□ 1.91
SMIM19-208ENST00000529505 TCIRG1Q13488 830 aa26.99■■□□□ 1.91
SMIM19-208ENST00000529505 ERFEQ4G0M1 354 aa26.99■■□□□ 1.91
SMIM19-208ENST00000529505 PARP10Q53GL7 1025 aa26.99■■□□□ 1.91
SMIM19-208ENST00000529505 SLFN5Q08AF3 891 aa26.98■■□□□ 1.91
SMIM19-208ENST00000529505 FAM177BA6PVY3 158 aa26.97■■□□□ 1.91
SMIM19-208ENST00000529505 SMC1BQ8NDV3 1235 aa26.97■■□□□ 1.91
SMIM19-208ENST00000529505 ABCC12Q96J65 1359 aa26.97■■□□□ 1.91
SMIM19-208ENST00000529505 IBTKQ9P2D0 1353 aaPredicted RBP26.97■■□□□ 1.91
SMIM19-208ENST00000529505 POTECB2RU33 542 aa26.96■■□□□ 1.91
SMIM19-208ENST00000529505 PHAXQ9H814 394 aaKnown RBP26.96■■□□□ 1.91
SMIM19-208ENST00000529505 SLC4A2P04920 1241 aa26.95■■□□□ 1.9
SMIM19-208ENST00000529505 GPTP24298 496 aa26.95■■□□□ 1.9
SMIM19-208ENST00000529505 CCDC93Q567U6 631 aa26.95■■□□□ 1.9
SMIM19-208ENST00000529505 SUSD4Q5VX71 490 aa26.95■■□□□ 1.9
SMIM19-208ENST00000529505 DPY19L2Q6NUT2 758 aa26.95■■□□□ 1.9
SMIM19-208ENST00000529505 PPP1R42Q7Z4L9 355 aa26.95■■□□□ 1.9
SMIM19-208ENST00000529505 TRMT2AQ8IZ69 625 aaKnown RBP26.95■■□□□ 1.9
SMIM19-208ENST00000529505 RIC1Q4ADV7 1423 aa26.95■■□□□ 1.9
SMIM19-208ENST00000529505 UBN2Q6ZU65 1347 aa26.94■■□□□ 1.9
SMIM19-208ENST00000529505 DDX58O95786 925 aaKnown RBP26.94■■□□□ 1.9
SMIM19-208ENST00000529505 GTF2E1P29083 439 aaPredicted RBP26.94■■□□□ 1.9
SMIM19-208ENST00000529505 TRIM28Q13263 835 aaKnown RBP26.94■■□□□ 1.9
SMIM19-208ENST00000529505 CRY2Q49AN0 593 aa26.94■■□□□ 1.9
SMIM19-208ENST00000529505 RIC3Q7Z5B4 369 aa26.92■■□□□ 1.9
SMIM19-208ENST00000529505 UTP14AQ9BVJ6 771 aaKnown RBP26.92■■□□□ 1.9
SMIM19-208ENST00000529505 RNF123Q5XPI4 1314 aa26.91■■□□□ 1.9
SMIM19-208ENST00000529505 SNED1Q8TER0 1413 aa26.91■■□□□ 1.9
SMIM19-208ENST00000529505 HTRA3P83110 453 aa26.91■■□□□ 1.9
SMIM19-208ENST00000529505 NLRP10Q86W26 655 aa26.91■■□□□ 1.9
SMIM19-208ENST00000529505 NUTM1Q86Y26 1132 aa26.91■■□□□ 1.9
SMIM19-208ENST00000529505 ISCA1Q9BUE6 129 aa26.91■■□□□ 1.9
SMIM19-208ENST00000529505 NTSR2O95665 410 aa26.9■■□□□ 1.9
SMIM19-208ENST00000529505 ALDH1B1P30837 517 aa26.9■■□□□ 1.9
SMIM19-208ENST00000529505 FKBP4Q02790 459 aaKnown RBP eCLIP26.9■■□□□ 1.9
SMIM19-208ENST00000529505 SLC10A5Q5PT55 438 aa26.9■■□□□ 1.9
SMIM19-208ENST00000529505 CDCA7LQ96GN5 454 aa26.9■■□□□ 1.9
SMIM19-208ENST00000529505 OLFM4Q6UX06 510 aa26.89■■□□□ 1.9
SMIM19-208ENST00000529505 KSR2Q6VAB6 950 aa26.89■■□□□ 1.9
SMIM19-208ENST00000529505 TCERG1O14776 1098 aaKnown RBP26.88■■□□□ 1.89
SMIM19-208ENST00000529505 ZNF428Q96B54 188 aa26.88■■□□□ 1.89
SMIM19-208ENST00000529505 DDNO94850 711 aaPredicted RBP26.87■■□□□ 1.89
SMIM19-208ENST00000529505 RTKN2Q8IZC4 609 aa26.87■■□□□ 1.89
SMIM19-208ENST00000529505 KLRG1Q96E93 195 aa26.87■■□□□ 1.89
SMIM19-208ENST00000529505 G2E3Q7L622 706 aa26.86■■□□□ 1.89
SMIM19-208ENST00000529505 METTL22Q9BUU2 404 aaPredicted RBP26.86■■□□□ 1.89
SMIM19-208ENST00000529505 ZNF277Q9NRM2 450 aaPredicted RBP26.86■■□□□ 1.89
SMIM19-208ENST00000529505 PI4KAP2A4QPH2 592 aa26.85■■□□□ 1.89
SMIM19-208ENST00000529505 HOXA10P31260 410 aaPredicted RBP26.85■■□□□ 1.89
SMIM19-208ENST00000529505 FLIIQ13045 1269 aa26.85■■□□□ 1.89
SMIM19-208ENST00000529505 PI4KAP1Q8N8J0 262 aa26.85■■□□□ 1.89
SMIM19-208ENST00000529505 ANKRD36CQ5JPF3 1778 aa26.84■■□□□ 1.89
SMIM19-208ENST00000529505 CT47B1P0C2W7 299 aaPredicted RBP26.84■■□□□ 1.89
SMIM19-208ENST00000529505 L3MBTL3Q96JM7 780 aaPredicted RBP26.84■■□□□ 1.89
SMIM19-208ENST00000529505 TRMT112Q9UI30 125 aaKnown RBP26.84■■□□□ 1.89
SMIM19-208ENST00000529505 MAP3K2Q9Y2U5 619 aa26.84■■□□□ 1.89
SMIM19-208ENST00000529505 SCN4AP35499 1836 aa26.83■■□□□ 1.89
SMIM19-208ENST00000529505 ATP5J2-PTCD1G3V325 749 aa26.83■■□□□ 1.89
SMIM19-208ENST00000529505 HNRNPUQ00839 825 aaKnown RBP eCLIP26.83■■□□□ 1.89
SMIM19-208ENST00000529505 JMYQ8N9B5 988 aa26.83■■□□□ 1.89
SMIM19-208ENST00000529505 CCDC191Q8NCU4 936 aa26.83■■□□□ 1.89
SMIM19-208ENST00000529505 SH3TC1Q8TE82 1336 aa26.83■■□□□ 1.89
SMIM19-208ENST00000529505 CACNA1FO60840 1977 aa26.82■■□□□ 1.88
SMIM19-208ENST00000529505 NLRP3Q96P20 1036 aa26.82■■□□□ 1.88
SMIM19-208ENST00000529505 CC2D2BQ6DHV5 1058 aa26.81■■□□□ 1.88
SMIM19-208ENST00000529505 RPGRQ92834 1020 aaKnown RBP26.81■■□□□ 1.88
SMIM19-208ENST00000529505 PSMD1Q99460 953 aa26.81■■□□□ 1.88
SMIM19-208ENST00000529505 MYD88Q99836 296 aa26.81■■□□□ 1.88
SMIM19-208ENST00000529505 IARSP41252 1262 aaKnown RBP26.8■■□□□ 1.88
SMIM19-208ENST00000529505 IFFO2Q5TF58 517 aa26.8■■□□□ 1.88
SMIM19-208ENST00000529505 SYNE4Q8N205 404 aa26.8■■□□□ 1.88
SMIM19-208ENST00000529505 CRAMP1Q96RY5 1269 aa26.8■■□□□ 1.88
SMIM19-208ENST00000529505 ZNF541Q9H0D2 1346 aa26.8■■□□□ 1.88
SMIM19-208ENST00000529505 NEXNQ0ZGT2 675 aa26.79■■□□□ 1.88
SMIM19-208ENST00000529505 FKBP5Q13451 457 aaPredicted RBP26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms