RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 PPP1R42Q7Z4L9 355 aa16.97■□□□□ 0.31
SSH3-206ENST00000529224 DBF4Q9UBU7 674 aaPredicted RBP16.97■□□□□ 0.31
SSH3-206ENST00000529224 RIC1Q4ADV7 1423 aa16.96■□□□□ 0.31
SSH3-206ENST00000529224 WDR90Q96KV7 1748 aa16.96■□□□□ 0.31
SSH3-206ENST00000529224 SOGA3Q5TF21 947 aa16.96■□□□□ 0.31
SSH3-206ENST00000529224 SUSD4Q5VX71 490 aa16.96■□□□□ 0.31
SSH3-206ENST00000529224 NUTM1Q86Y26 1132 aa16.96■□□□□ 0.31
SSH3-206ENST00000529224 ABCC12Q96J65 1359 aa16.96■□□□□ 0.31
SSH3-206ENST00000529224 ERFEQ4G0M1 354 aa16.95■□□□□ 0.3
SSH3-206ENST00000529224 NCBP3Q53F19 620 aaKnown RBP16.95■□□□□ 0.3
SSH3-206ENST00000529224 HYPKQ9NX55 129 aa16.95■□□□□ 0.3
SSH3-206ENST00000529224 LTBP3Q9NS15 1303 aa16.95■□□□□ 0.3
SSH3-206ENST00000529224 LAMB2P55268 1798 aa16.94■□□□□ 0.3
SSH3-206ENST00000529224 NTSR2O95665 410 aa16.94■□□□□ 0.3
SSH3-206ENST00000529224 FSTL1Q12841 308 aa16.94■□□□□ 0.3
SSH3-206ENST00000529224 WWC1Q8IX03 1113 aa16.94■□□□□ 0.3
SSH3-206ENST00000529224 C7orf43Q8WVR3 580 aa16.94■□□□□ 0.3
SSH3-206ENST00000529224 CHMP4AQ9BY43 222 aa16.94■□□□□ 0.3
SSH3-206ENST00000529224 ALDH1B1P30837 517 aa16.93■□□□□ 0.3
SSH3-206ENST00000529224 CRY2Q49AN0 593 aa16.93■□□□□ 0.3
SSH3-206ENST00000529224 PLBD2Q8NHP8 589 aa16.93■□□□□ 0.3
SSH3-206ENST00000529224 UTP14AQ9BVJ6 771 aaKnown RBP16.93■□□□□ 0.3
SSH3-206ENST00000529224 TAOK3Q9H2K8 898 aa16.93■□□□□ 0.3
SSH3-206ENST00000529224 RNF123Q5XPI4 1314 aa16.93■□□□□ 0.3
SSH3-206ENST00000529224 POTECB2RU33 542 aa16.92■□□□□ 0.3
SSH3-206ENST00000529224 VEGFAP15692 232 aaPredicted RBP16.92■□□□□ 0.3
SSH3-206ENST00000529224 TCIRG1Q13488 830 aa16.92■□□□□ 0.3
SSH3-206ENST00000529224 OLFM4Q6UX06 510 aa16.92■□□□□ 0.3
SSH3-206ENST00000529224 ANKRD13DQ6ZTN6 518 aa16.92■□□□□ 0.3
SSH3-206ENST00000529224 IL16Q14005 1332 aa16.92■□□□□ 0.3
SSH3-206ENST00000529224 ELL2O00472 640 aaPredicted RBP16.91■□□□□ 0.3
SSH3-206ENST00000529224 CCDC93Q567U6 631 aa16.91■□□□□ 0.3
SSH3-206ENST00000529224 C8orf58Q8NAV2 365 aa16.91■□□□□ 0.3
SSH3-206ENST00000529224 RPGRQ92834 1020 aaKnown RBP16.91■□□□□ 0.3
SSH3-206ENST00000529224 CCDC30Q5VVM6 783 aa16.9■□□□□ 0.3
SSH3-206ENST00000529224 NLRP10Q86W26 655 aa16.9■□□□□ 0.3
SSH3-206ENST00000529224 SMC1BQ8NDV3 1235 aa16.9■□□□□ 0.3
SSH3-206ENST00000529224 HOXA10P31260 410 aaPredicted RBP16.89■□□□□ 0.29
SSH3-206ENST00000529224 SLC10A5Q5PT55 438 aa16.89■□□□□ 0.29
SSH3-206ENST00000529224 TSR2Q969E8 191 aaKnown RBP16.89■□□□□ 0.29
SSH3-206ENST00000529224 KLRG1Q96E93 195 aa16.89■□□□□ 0.29
SSH3-206ENST00000529224 NLRP3Q96P20 1036 aa16.89■□□□□ 0.29
SSH3-206ENST00000529224 DDX60Q8IY21 1712 aaKnown RBP16.89■□□□□ 0.29
SSH3-206ENST00000529224 TAF1P21675 1872 aa16.88■□□□□ 0.29
SSH3-206ENST00000529224 GOLGA2Q08379 1002 aa16.88■□□□□ 0.29
SSH3-206ENST00000529224 DPY19L2Q6NUT2 758 aa16.88■□□□□ 0.29
SSH3-206ENST00000529224 RTKN2Q8IZC4 609 aa16.88■□□□□ 0.29
SSH3-206ENST00000529224 FAM9BQ8IZU0 186 aa16.88■□□□□ 0.29
SSH3-206ENST00000529224 RBM17Q96I25 401 aaKnown RBP16.88■□□□□ 0.29
SSH3-206ENST00000529224 CRAMP1Q96RY5 1269 aa16.88■□□□□ 0.29
SSH3-206ENST00000529224 SNED1Q8TER0 1413 aa16.87■□□□□ 0.29
SSH3-206ENST00000529224 DDNO94850 711 aaPredicted RBP16.87■□□□□ 0.29
SSH3-206ENST00000529224 WDR63Q8IWG1 891 aa16.87■□□□□ 0.29
SSH3-206ENST00000529224 TSPYL6Q8N831 410 aa16.87■□□□□ 0.29
SSH3-206ENST00000529224 ISCA1Q9BUE6 129 aa16.87■□□□□ 0.29
SSH3-206ENST00000529224 TRMT112Q9UI30 125 aaKnown RBP16.87■□□□□ 0.29
SSH3-206ENST00000529224 SH3TC1Q8TE82 1336 aa16.87■□□□□ 0.29
SSH3-206ENST00000529224 FKBP4Q02790 459 aaKnown RBP eCLIP16.86■□□□□ 0.29
SSH3-206ENST00000529224 CC2D2BQ6DHV5 1058 aa16.86■□□□□ 0.29
SSH3-206ENST00000529224 RIC3Q7Z5B4 369 aa16.86■□□□□ 0.29
SSH3-206ENST00000529224 ZNF277Q9NRM2 450 aaPredicted RBP16.86■□□□□ 0.29
SSH3-206ENST00000529224 SALL2Q9Y467 1007 aaPredicted RBP16.86■□□□□ 0.29
SSH3-206ENST00000529224 PCNTO95613 3336 aa16.85■□□□□ 0.29
SSH3-206ENST00000529224 TRIM28Q13263 835 aaKnown RBP16.85■□□□□ 0.29
SSH3-206ENST00000529224 C3orf67Q6ZVT6 689 aa16.85■□□□□ 0.29
SSH3-206ENST00000529224 SLC51AQ86UW1 340 aa16.85■□□□□ 0.29
SSH3-206ENST00000529224 PHAXQ9H814 394 aaKnown RBP16.85■□□□□ 0.29
SSH3-206ENST00000529224 MYH3P11055 1940 aa16.84■□□□□ 0.29
SSH3-206ENST00000529224 ATP5J2-PTCD1G3V325 749 aa16.84■□□□□ 0.29
SSH3-206ENST00000529224 DDX58O95786 925 aaKnown RBP16.84■□□□□ 0.29
SSH3-206ENST00000529224 HCLS1P14317 486 aaPredicted RBP16.84■□□□□ 0.29
SSH3-206ENST00000529224 TWISTNBQ3B726 338 aaPredicted RBP16.84■□□□□ 0.29
SSH3-206ENST00000529224 GRIPAP1Q4V328 841 aa16.84■□□□□ 0.29
SSH3-206ENST00000529224 STK31Q9BXU1 1019 aa16.84■□□□□ 0.29
SSH3-206ENST00000529224 PPEF1O14829 653 aaPredicted RBP16.83■□□□□ 0.28
SSH3-206ENST00000529224 POTEIP0CG38 1075 aa16.83■□□□□ 0.28
SSH3-206ENST00000529224 POTEJP0CG39 1038 aa16.83■□□□□ 0.28
SSH3-206ENST00000529224 SYNE4Q8N205 404 aa16.83■□□□□ 0.28
SSH3-206ENST00000529224 JMYQ8N9B5 988 aa16.83■□□□□ 0.28
SSH3-206ENST00000529224 ZNF541Q9H0D2 1346 aa16.83■□□□□ 0.28
SSH3-206ENST00000529224 FANCIQ9NVI1 1328 aa16.83■□□□□ 0.28
SSH3-206ENST00000529224 COL4A5P29400 1685 aa16.82■□□□□ 0.28
SSH3-206ENST00000529224 PSMD1Q99460 953 aa16.82■□□□□ 0.28
SSH3-206ENST00000529224 TMX4Q9H1E5 349 aaPredicted RBP16.82■□□□□ 0.28
SSH3-206ENST00000529224 SCN4AP35499 1836 aa16.82■□□□□ 0.28
SSH3-206ENST00000529224 ABCC4O15439 1325 aa16.81■□□□□ 0.28
SSH3-206ENST00000529224 COL13A1Q5TAT6 717 aaPredicted RBP16.81■□□□□ 0.28
SSH3-206ENST00000529224 DDX46Q7L014 1031 aaKnown RBP16.81■□□□□ 0.28
SSH3-206ENST00000529224 FAM89AQ96GI7 184 aa16.81■□□□□ 0.28
SSH3-206ENST00000529224 L3MBTL3Q96JM7 780 aaPredicted RBP16.81■□□□□ 0.28
SSH3-206ENST00000529224 BBOX1O75936 387 aa16.8■□□□□ 0.28
SSH3-206ENST00000529224 IARSP41252 1262 aaKnown RBP16.8■□□□□ 0.28
SSH3-206ENST00000529224 CCDC191Q8NCU4 936 aa16.8■□□□□ 0.28
SSH3-206ENST00000529224 ZNF428Q96B54 188 aa16.8■□□□□ 0.28
SSH3-206ENST00000529224 MYD88Q99836 296 aa16.8■□□□□ 0.28
SSH3-206ENST00000529224 METTL22Q9BUU2 404 aaPredicted RBP16.8■□□□□ 0.28
SSH3-206ENST00000529224 TCERG1O14776 1098 aaKnown RBP16.79■□□□□ 0.28
SSH3-206ENST00000529224 HSP90B1P14625 803 aaKnown RBP16.79■□□□□ 0.28
SSH3-206ENST00000529224 ZBTB38Q8NAP3 1195 aaPredicted RBP16.79■□□□□ 0.28
SSH3-206ENST00000529224 MYH16Q9H6N6 1097 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms