RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 RTN1Q16799 776 aa8.85□□□□□ -0.99
CSDE1-212ENST00000529046 TMEM151AQ8N4L1 468 aa8.85□□□□□ -0.99
CSDE1-212ENST00000529046 DCAF1Q9Y4B6 1507 aa8.85□□□□□ -0.99
CSDE1-212ENST00000529046 PCBP4P57723 403 aaKnown RBP8.84□□□□□ -0.99
CSDE1-212ENST00000529046 TYRO3Q06418 890 aa8.84□□□□□ -0.99
CSDE1-212ENST00000529046 SFSWAPQ12872 951 aaKnown RBP8.84□□□□□ -0.99
CSDE1-212ENST00000529046 OCLNQ16625 522 aa8.84□□□□□ -0.99
CSDE1-212ENST00000529046 VTI1AQ96AJ9 217 aa8.84□□□□□ -0.99
CSDE1-212ENST00000529046 RRAGCQ9HB90 399 aa8.84□□□□□ -0.99
CSDE1-212ENST00000529046 FCHSD1Q86WN1 690 aa8.83□□□□□ -1
CSDE1-212ENST00000529046 KLF15Q9UIH9 416 aa8.83□□□□□ -1
CSDE1-212ENST00000529046 GRIN2CQ14957 1233 aa8.82□□□□□ -1
CSDE1-212ENST00000529046 BTLAQ7Z6A9 289 aa8.82□□□□□ -1
CSDE1-212ENST00000529046 KCNQ4P56696 695 aa8.81□□□□□ -1
CSDE1-212ENST00000529046 SNRPNP63162 240 aaKnown RBP8.81□□□□□ -1
CSDE1-212ENST00000529046 IER5Q5VY09 327 aa8.81□□□□□ -1
CSDE1-212ENST00000529046 SYT9Q86SS6 491 aa8.81□□□□□ -1
CSDE1-212ENST00000529046 BTBD6Q96KE9 485 aa8.81□□□□□ -1
CSDE1-212ENST00000529046 SLC30A3Q99726 388 aa8.81□□□□□ -1
CSDE1-212ENST00000529046 MKL2Q9ULH7 1088 aa8.81□□□□□ -1
CSDE1-212ENST00000529046 KCNH4Q9UQ05 1017 aa8.81□□□□□ -1
CSDE1-212ENST00000529046 TGFBR3LH3BV60 316 aa8.8□□□□□ -1
CSDE1-212ENST00000529046 SSFA2P28290 1259 aa8.8□□□□□ -1
CSDE1-212ENST00000529046 SPEM2Q0P670 501 aa8.8□□□□□ -1
CSDE1-212ENST00000529046 NEUROD1Q13562 356 aa8.8□□□□□ -1
CSDE1-212ENST00000529046 PHLDB3Q6NSJ2 640 aa8.8□□□□□ -1
CSDE1-212ENST00000529046 QTRT2Q9H974 415 aaKnown RBP8.8□□□□□ -1
CSDE1-212ENST00000529046 BICRAQ9NZM4 1560 aa8.79□□□□□ -1
CSDE1-212ENST00000529046 ZCCHC6Q5VYS8 1495 aaKnown RBP8.79□□□□□ -1
CSDE1-212ENST00000529046 SHROOM4Q9ULL8 1493 aa8.79□□□□□ -1
CSDE1-212ENST00000529046 PRMT3O60678 531 aa8.79□□□□□ -1
CSDE1-212ENST00000529046 CHSY3Q70JA7 882 aa8.79□□□□□ -1
CSDE1-212ENST00000529046 PRIMPOLQ96LW4 560 aa8.79□□□□□ -1
CSDE1-212ENST00000529046 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.79□□□□□ -11e-6■■■■■ 139.3
CSDE1-212ENST00000529046 KLK14Q9P0G3 267 aa8.79□□□□□ -1
CSDE1-212ENST00000529046 UNC13AQ9UPW8 1703 aa8.78□□□□□ -1
CSDE1-212ENST00000529046 CARNS1A5YM72 827 aa8.78□□□□□ -1
CSDE1-212ENST00000529046 SIN3BO75182 1162 aa8.78□□□□□ -1
CSDE1-212ENST00000529046 FKBP5Q13451 457 aaPredicted RBP8.78□□□□□ -1
CSDE1-212ENST00000529046 DGKZQ13574 1117 aa8.78□□□□□ -1
CSDE1-212ENST00000529046 RAB44Q7Z6P3 723 aaPredicted RBP8.78□□□□□ -1
CSDE1-212ENST00000529046 KCTD17Q8N5Z5 321 aa8.78□□□□□ -1
CSDE1-212ENST00000529046 BCS1LQ9Y276 419 aa8.78□□□□□ -1
CSDE1-212ENST00000529046 ELOA3CA0A087WX78 387 aaPredicted RBP8.77□□□□□ -1.01
CSDE1-212ENST00000529046 ELOA3DA6NLF2 546 aaPredicted RBP8.77□□□□□ -1.01
CSDE1-212ENST00000529046 HOXB4P17483 251 aaPredicted RBP8.77□□□□□ -1.01
CSDE1-212ENST00000529046 ELOA3BQ3SY89 546 aa8.77□□□□□ -1.01
CSDE1-212ENST00000529046 ELOA3Q8NG57 546 aa8.77□□□□□ -1.01
CSDE1-212ENST00000529046 MYO19Q96H55 970 aa8.77□□□□□ -1.01
CSDE1-212ENST00000529046 CXXC1Q9P0U4 656 aaPredicted RBP8.77□□□□□ -1.01
CSDE1-212ENST00000529046 PIK3R2O00459 728 aa8.76□□□□□ -1.01
CSDE1-212ENST00000529046 BRD1O95696 1058 aa8.76□□□□□ -1.01
CSDE1-212ENST00000529046 EPB42P16452 691 aa8.76□□□□□ -1.01
CSDE1-212ENST00000529046 ALAS2P22557 587 aa8.76□□□□□ -1.01
CSDE1-212ENST00000529046 DGKGP49619 791 aa8.76□□□□□ -1.01
CSDE1-212ENST00000529046 COL26A1Q96A83 441 aa8.76□□□□□ -1.01
CSDE1-212ENST00000529046 DMGDHQ9UI17 866 aaKnown RBP8.76□□□□□ -1.01
CSDE1-212ENST00000529046 C11orf91Q3C1V1 193 aa8.75□□□□□ -1.01
CSDE1-212ENST00000529046 LINC00114Q6XXX2 140 aa8.75□□□□□ -1.01
CSDE1-212ENST00000529046 TNFRSF25Q93038 417 aa8.75□□□□□ -1.01
CSDE1-212ENST00000529046 BHMTQ93088 406 aa8.75□□□□□ -1.01
CSDE1-212ENST00000529046 ADARB2-AS1A8MUL3 147 aa8.74□□□□□ -1.01
CSDE1-212ENST00000529046 GNB5O14775 395 aa8.74□□□□□ -1.01
CSDE1-212ENST00000529046 PDIA4P13667 645 aaKnown RBP8.74□□□□□ -1.01
CSDE1-212ENST00000529046 ATP2B4P23634 1241 aa8.74□□□□□ -1.01
CSDE1-212ENST00000529046 IDH3AP50213 366 aa8.74□□□□□ -1.01
CSDE1-212ENST00000529046 DCAF5Q96JK2 942 aa8.74□□□□□ -1.01
CSDE1-212ENST00000529046 MDFIQ99750 246 aa8.74□□□□□ -1.01
CSDE1-212ENST00000529046 ARSDP51689 593 aa8.73□□□□□ -1.01
CSDE1-212ENST00000529046 B4GALNT3Q6L9W6 998 aa8.73□□□□□ -1.01
CSDE1-212ENST00000529046 EFCC1Q9HA90 598 aa8.73□□□□□ -1.01
CSDE1-212ENST00000529046 LRFN2Q9ULH4 789 aa8.73□□□□□ -1.01
CSDE1-212ENST00000529046 MICAL2O94851 1124 aa8.72□□□□□ -1.01
CSDE1-212ENST00000529046 INPP5BP32019 993 aa8.72□□□□□ -1.01
CSDE1-212ENST00000529046 ADH7P40394 386 aa8.72□□□□□ -1.01
CSDE1-212ENST00000529046 COX20Q5RI15 118 aa8.72□□□□□ -1.01
CSDE1-212ENST00000529046 IFT43Q96FT9 208 aa8.72□□□□□ -1.01
CSDE1-212ENST00000529046 PNMA5Q96PV4 448 aa8.72□□□□□ -1.01
CSDE1-212ENST00000529046 MKNK1Q9BUB5 465 aa8.72□□□□□ -1.01
CSDE1-212ENST00000529046 CCINQ13939 588 aa8.71□□□□□ -1.02
CSDE1-212ENST00000529046 GPAT2Q6NUI2 795 aa8.71□□□□□ -1.02
CSDE1-212ENST00000529046 ALYREFQ86V81 257 aaKnown RBP8.71□□□□□ -1.02
CSDE1-212ENST00000529046 TXNDC2Q86VQ3 553 aa8.71□□□□□ -1.02
CSDE1-212ENST00000529046 GSX2Q9BZM3 304 aa8.71□□□□□ -1.02
CSDE1-212ENST00000529046 SUV39H2Q9H5I1 410 aa8.71□□□□□ -1.02
CSDE1-212ENST00000529046 NOP53Q9NZM5 478 aaKnown RBP8.71□□□□□ -1.02
CSDE1-212ENST00000529046 GNEQ9Y223 722 aaKnown RBP8.71□□□□□ -1.02
CSDE1-212ENST00000529046 COL8A1P27658 744 aa8.7□□□□□ -1.02
CSDE1-212ENST00000529046 TBC1D8BQ0IIM8 1120 aa8.7□□□□□ -1.02
CSDE1-212ENST00000529046 C16orf46Q6P387 395 aa8.7□□□□□ -1.02
CSDE1-212ENST00000529046 UBE2OQ9C0C9 1292 aaKnown RBP8.7□□□□□ -1.02
CSDE1-212ENST00000529046 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.7□□□□□ -1.02
CSDE1-212ENST00000529046 PTCD1O75127 700 aaKnown RBP8.69□□□□□ -1.02
CSDE1-212ENST00000529046 NFKB1P19838 968 aa8.69□□□□□ -1.02
CSDE1-212ENST00000529046 GRNP28799 593 aaKnown RBP8.69□□□□□ -1.02
CSDE1-212ENST00000529046 KCNA1Q09470 495 aa8.69□□□□□ -1.02
CSDE1-212ENST00000529046 PLA2G4EQ3MJ16 856 aa8.69□□□□□ -1.02
CSDE1-212ENST00000529046 TREML1Q86YW5 311 aa8.69□□□□□ -1.02
CSDE1-212ENST00000529046 IGFLR1Q9H665 355 aa8.69□□□□□ -1.02
CSDE1-212ENST00000529046 IGHA1P01876 353 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms