RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 RGS22Q8NE09 1264 aa5.65□□□□□ -1.5
BRCA2-203ENST00000528762 ZNF417Q8TAU3 575 aa5.65□□□□□ -1.5
BRCA2-203ENST00000528762 SCG3Q8WXD2 468 aaKnown RBP5.65□□□□□ -1.5
BRCA2-203ENST00000528762 BHMTQ93088 406 aa5.65□□□□□ -1.5
BRCA2-203ENST00000528762 SUSD3Q96L08 255 aa5.65□□□□□ -1.5
BRCA2-203ENST00000528762 ZNF587Q96SQ5 575 aaPredicted RBP5.65□□□□□ -1.5
BRCA2-203ENST00000528762 VRTNQ9H8Y1 702 aa5.65□□□□□ -1.5
BRCA2-203ENST00000528762 AVENQ9NQS1 362 aaPredicted RBP5.65□□□□□ -1.5
BRCA2-203ENST00000528762 CHMP3Q9Y3E7 222 aa5.65□□□□□ -1.5
BRCA2-203ENST00000528762 STARD13Q9Y3M8 1113 aa5.65□□□□□ -1.5
BRCA2-203ENST00000528762 PIK3R2O00459 728 aa5.64□□□□□ -1.51
BRCA2-203ENST00000528762 DKK1O94907 266 aa5.64□□□□□ -1.51
BRCA2-203ENST00000528762 ATG7O95352 703 aa5.64□□□□□ -1.51
BRCA2-203ENST00000528762 ALAS2P22557 587 aa5.64□□□□□ -1.51
BRCA2-203ENST00000528762 ADH7P40394 386 aa5.64□□□□□ -1.51
BRCA2-203ENST00000528762 TYRO3Q06418 890 aa5.64□□□□□ -1.51
BRCA2-203ENST00000528762 LAMC2Q13753 1193 aa5.64□□□□□ -1.51
BRCA2-203ENST00000528762 ALDH16A1Q8IZ83 802 aa5.64□□□□□ -1.51
BRCA2-203ENST00000528762 LARGE2Q8N3Y3 721 aa5.64□□□□□ -1.51
BRCA2-203ENST00000528762 RBM19Q9Y4C8 960 aaKnown RBP5.64□□□□□ -1.51
BRCA2-203ENST00000528762 TMCO4Q5TGY1 634 aa5.63□□□□□ -1.51
BRCA2-203ENST00000528762 ALYREFQ86V81 257 aaKnown RBP5.63□□□□□ -1.51
BRCA2-203ENST00000528762 SIX5Q8N196 739 aa5.63□□□□□ -1.51
BRCA2-203ENST00000528762 MDFIQ99750 246 aa5.63□□□□□ -1.51
BRCA2-203ENST00000528762 HINFPQ9BQA5 517 aa5.63□□□□□ -1.51
BRCA2-203ENST00000528762 MAFBQ9Y5Q3 323 aaPredicted RBP5.63□□□□□ -1.51
BRCA2-203ENST00000528762 SIN3BO75182 1162 aa5.62□□□□□ -1.51
BRCA2-203ENST00000528762 ITGB7P26010 798 aa5.62□□□□□ -1.51
BRCA2-203ENST00000528762 KCNA1Q09470 495 aa5.62□□□□□ -1.51
BRCA2-203ENST00000528762 CRTC2Q53ET0 693 aaPredicted RBP5.62□□□□□ -1.51
BRCA2-203ENST00000528762 SEMA6BQ9H3T3 888 aa5.62□□□□□ -1.51
BRCA2-203ENST00000528762 KCNH4Q9UQ05 1017 aa5.62□□□□□ -1.51
BRCA2-203ENST00000528762 ATAD2Q6PL18 1390 aa5.62□□□□□ -1.51
BRCA2-203ENST00000528762 CARNS1A5YM72 827 aa5.61□□□□□ -1.51
BRCA2-203ENST00000528762 SEC13P55735 322 aa5.61□□□□□ -1.51
BRCA2-203ENST00000528762 DPYDQ12882 1025 aa5.61□□□□□ -1.51
BRCA2-203ENST00000528762 COL9A3Q14050 684 aaPredicted RBP5.61□□□□□ -1.51
BRCA2-203ENST00000528762 GRIK4Q16099 956 aa5.61□□□□□ -1.51
BRCA2-203ENST00000528762 KANK4Q5T7N3 995 aaPredicted RBP5.61□□□□□ -1.51
BRCA2-203ENST00000528762 C1orf53Q5VUE5 145 aa5.61□□□□□ -1.51
BRCA2-203ENST00000528762 BTLAQ7Z6A9 289 aa5.61□□□□□ -1.51
BRCA2-203ENST00000528762 MICALL1Q8N3F8 863 aa5.61□□□□□ -1.51
BRCA2-203ENST00000528762 NUDT8Q8WV74 236 aa5.61□□□□□ -1.51
BRCA2-203ENST00000528762 UBE2OQ9C0C9 1292 aaKnown RBP5.61□□□□□ -1.51
BRCA2-203ENST00000528762 ADARB2-AS1A8MUL3 147 aa5.6□□□□□ -1.51
BRCA2-203ENST00000528762 SPATA31C1P0DKV0 1188 aa5.6□□□□□ -1.51
BRCA2-203ENST00000528762 GATA4P43694 442 aa5.6□□□□□ -1.51
BRCA2-203ENST00000528762 HIRAP54198 1017 aaPredicted RBP5.6□□□□□ -1.51
BRCA2-203ENST00000528762 LARP1Q6PKG0 1096 aaKnown RBP5.6□□□□□ -1.51
BRCA2-203ENST00000528762 TNFRSF25Q93038 417 aa5.6□□□□□ -1.51
BRCA2-203ENST00000528762 C2orf49Q9BVC5 232 aaPredicted RBP5.6□□□□□ -1.51
BRCA2-203ENST00000528762 KLK14Q9P0G3 267 aa5.6□□□□□ -1.51
BRCA2-203ENST00000528762 ANKIB1Q9P2G1 1089 aa5.6□□□□□ -1.51
BRCA2-203ENST00000528762 TMEM88BA6NKF7 163 aa5.59□□□□□ -1.51
BRCA2-203ENST00000528762 M0R2N6 131 aa5.59□□□□□ -1.51
BRCA2-203ENST00000528762 PRRT3Q5FWE3 981 aa5.59□□□□□ -1.51
BRCA2-203ENST00000528762 POTEAQ6S8J7 498 aa5.59□□□□□ -1.51
BRCA2-203ENST00000528762 KRT25Q7Z3Z0 450 aa5.59□□□□□ -1.51
BRCA2-203ENST00000528762 Q8N3U1 123 aa5.59□□□□□ -1.51
BRCA2-203ENST00000528762 BCS1LQ9Y276 419 aa5.59□□□□□ -1.51
BRCA2-203ENST00000528762 GPC6Q9Y625 555 aaPredicted RBP5.59□□□□□ -1.51
BRCA2-203ENST00000528762 APBA3O96018 575 aa5.58□□□□□ -1.52
BRCA2-203ENST00000528762 NID1P14543 1247 aa5.58□□□□□ -1.52
BRCA2-203ENST00000528762 NFKB1P19838 968 aa5.58□□□□□ -1.52
BRCA2-203ENST00000528762 MFAP1P55081 439 aaKnown RBP5.58□□□□□ -1.52
BRCA2-203ENST00000528762 PTK7Q13308 1070 aa5.58□□□□□ -1.52
BRCA2-203ENST00000528762 NEUROD1Q13562 356 aa5.58□□□□□ -1.52
BRCA2-203ENST00000528762 ELOAQ14241 798 aaKnown RBP5.58□□□□□ -1.52
BRCA2-203ENST00000528762 JPH1Q9HDC5 661 aaPredicted RBP5.58□□□□□ -1.52
BRCA2-203ENST00000528762 TPSG1Q9NRR2 321 aa5.58□□□□□ -1.52
BRCA2-203ENST00000528762 SLC6A14Q9UN76 642 aa5.58□□□□□ -1.52
BRCA2-203ENST00000528762 USP20Q9Y2K6 914 aa5.58□□□□□ -1.52
BRCA2-203ENST00000528762 USP17L15C9J2P7 530 aa5.57□□□□□ -1.52
BRCA2-203ENST00000528762 USP17L10C9JJH3 530 aa5.57□□□□□ -1.52
BRCA2-203ENST00000528762 USP17L13C9JLJ4 530 aa5.57□□□□□ -1.52
BRCA2-203ENST00000528762 USP17L12C9JPN9 530 aa5.57□□□□□ -1.52
BRCA2-203ENST00000528762 USP17L11C9JVI0 530 aa5.57□□□□□ -1.52
BRCA2-203ENST00000528762 USP17L21D6R901 530 aa5.57□□□□□ -1.52
BRCA2-203ENST00000528762 USP17L18D6R9N7 530 aa5.57□□□□□ -1.52
BRCA2-203ENST00000528762 USP17L22D6RA61 530 aa5.57□□□□□ -1.52
BRCA2-203ENST00000528762 USP17L17D6RBQ6 530 aa5.57□□□□□ -1.52
BRCA2-203ENST00000528762 USP17L19D6RCP7 530 aa5.57□□□□□ -1.52
BRCA2-203ENST00000528762 USP17L20D6RJB6 530 aa5.57□□□□□ -1.52
BRCA2-203ENST00000528762 GRNP28799 593 aaKnown RBP5.57□□□□□ -1.52
BRCA2-203ENST00000528762 KCNQ4P56696 695 aa5.57□□□□□ -1.52
BRCA2-203ENST00000528762 MLLT1Q03111 559 aaPredicted RBP5.57□□□□□ -1.52
BRCA2-203ENST00000528762 USP17L24Q0WX57 530 aa5.57□□□□□ -1.52
BRCA2-203ENST00000528762 TRIM28Q13263 835 aaKnown RBP5.57□□□□□ -1.52
BRCA2-203ENST00000528762 TRAPPC3LQ5T215 181 aa5.57□□□□□ -1.52
BRCA2-203ENST00000528762 C20orf204Q6ZNR8 217 aa5.57□□□□□ -1.52
BRCA2-203ENST00000528762 PNMA5Q96PV4 448 aa5.57□□□□□ -1.52
BRCA2-203ENST00000528762 DNAJB12Q9NXW2 375 aaKnown RBP5.57□□□□□ -1.52
BRCA2-203ENST00000528762 NAGPAQ9UK23 515 aa5.57□□□□□ -1.52
BRCA2-203ENST00000528762 LILRB5O75023 590 aa5.56□□□□□ -1.52
BRCA2-203ENST00000528762 DGKZQ13574 1117 aa5.56□□□□□ -1.52
BRCA2-203ENST00000528762 PSAPL1Q6NUJ1 521 aa5.56□□□□□ -1.52
BRCA2-203ENST00000528762 SHISA2Q6UWI4 295 aa5.56□□□□□ -1.52
BRCA2-203ENST00000528762 ANKMY2Q8IV38 441 aa5.56□□□□□ -1.52
BRCA2-203ENST00000528762 MTMR7Q9Y216 660 aa5.56□□□□□ -1.52
BRCA2-203ENST00000528762 SPDYE3A6NKU9 549 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms