RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 ALDH1L1O75891 902 aa15.37■□□□□ 0.05
TRAF3IP2-211ENST00000528599 TRIM28Q13263 835 aaKnown RBP15.37■□□□□ 0.05
TRAF3IP2-211ENST00000528599 UBN2Q6ZU65 1347 aa15.37■□□□□ 0.05
TRAF3IP2-211ENST00000528599 NLRP10Q86W26 655 aa15.36■□□□□ 0.05
TRAF3IP2-211ENST00000528599 NIP7Q9Y221 180 aaKnown RBP eCLIP15.36■□□□□ 0.05
TRAF3IP2-211ENST00000528599 GCKRQ14397 625 aa15.35■□□□□ 0.05
TRAF3IP2-211ENST00000528599 BICDL1Q6ZP65 573 aa15.35■□□□□ 0.05
TRAF3IP2-211ENST00000528599 NFIXQ14938 502 aa15.35■□□□□ 0.05
TRAF3IP2-211ENST00000528599 CCDC191Q8NCU4 936 aa15.35■□□□□ 0.05
TRAF3IP2-211ENST00000528599 USP44Q9H0E7 712 aa15.35■□□□□ 0.05
TRAF3IP2-211ENST00000528599 CWC25Q9NXE8 425 aaPredicted RBP15.35■□□□□ 0.05
TRAF3IP2-211ENST00000528599 AFDNP55196 1824 aaKnown RBP15.34■□□□□ 0.05
TRAF3IP2-211ENST00000528599 ZBTB7BO15156 539 aaPredicted RBP15.34■□□□□ 0.05
TRAF3IP2-211ENST00000528599 TM4SF1P30408 202 aa15.34■□□□□ 0.05
TRAF3IP2-211ENST00000528599 SUSD4Q5VX71 490 aa15.34■□□□□ 0.05
TRAF3IP2-211ENST00000528599 NLGN1Q8N2Q7 840 aa15.34■□□□□ 0.05
TRAF3IP2-211ENST00000528599 EXOC6Q8TAG9 804 aa15.34■□□□□ 0.05
TRAF3IP2-211ENST00000528599 MEIS3Q99687 375 aa15.34■□□□□ 0.05
TRAF3IP2-211ENST00000528599 IBTKQ9P2D0 1353 aaPredicted RBP15.33■□□□□ 0.04
TRAF3IP2-211ENST00000528599 JARID2Q92833 1246 aaPredicted RBP15.33■□□□□ 0.04
TRAF3IP2-211ENST00000528599 SETDB2Q96T68 719 aa15.33■□□□□ 0.04
TRAF3IP2-211ENST00000528599 DDX19BQ9UMR2 479 aa15.33■□□□□ 0.04
TRAF3IP2-211ENST00000528599 FAM177BA6PVY3 158 aa15.32■□□□□ 0.04
TRAF3IP2-211ENST00000528599 NBPF7P0C2Y1 421 aaPredicted RBP15.32■□□□□ 0.04
TRAF3IP2-211ENST00000528599 PARP10Q53GL7 1025 aa15.32■□□□□ 0.04
TRAF3IP2-211ENST00000528599 H7C1W4 665 aa15.32■□□□□ 0.04
TRAF3IP2-211ENST00000528599 GRM8O00222 908 aa15.32■□□□□ 0.04
TRAF3IP2-211ENST00000528599 MMP10P09238 476 aa15.32■□□□□ 0.04
TRAF3IP2-211ENST00000528599 DDR1Q08345 913 aa15.32■□□□□ 0.04
TRAF3IP2-211ENST00000528599 SYNE4Q8N205 404 aa15.32■□□□□ 0.04
TRAF3IP2-211ENST00000528599 FHDC1Q9C0D6 1143 aaPredicted RBP15.32■□□□□ 0.04
TRAF3IP2-211ENST00000528599 C9orf78Q9NZ63 289 aaPredicted RBP15.32■□□□□ 0.04
TRAF3IP2-211ENST00000528599 UTYO14607 1347 aa15.31■□□□□ 0.04
TRAF3IP2-211ENST00000528599 NTSR2O95665 410 aa15.31■□□□□ 0.04
TRAF3IP2-211ENST00000528599 NEFLP07196 543 aa15.31■□□□□ 0.04
TRAF3IP2-211ENST00000528599 CASP7P55210 303 aa15.31■□□□□ 0.04
TRAF3IP2-211ENST00000528599 RTL5Q5HYW3 569 aaPredicted RBP15.31■□□□□ 0.04
TRAF3IP2-211ENST00000528599 UBE3BQ7Z3V4 1068 aa15.31■□□□□ 0.04
TRAF3IP2-211ENST00000528599 PPP1R1BQ9UD71 204 aaPredicted RBP15.31■□□□□ 0.04
TRAF3IP2-211ENST00000528599 TRMT112Q9UI30 125 aaKnown RBP15.31■□□□□ 0.04
TRAF3IP2-211ENST00000528599 CARMIL3Q8ND23 1372 aa15.3■□□□□ 0.04
TRAF3IP2-211ENST00000528599 PCCAP05165 728 aaPredicted RBP15.3■□□□□ 0.04
TRAF3IP2-211ENST00000528599 POLD1P28340 1107 aa15.3■□□□□ 0.04
TRAF3IP2-211ENST00000528599 PPP1R42Q7Z4L9 355 aa15.3■□□□□ 0.04
TRAF3IP2-211ENST00000528599 ZBTB38Q8NAP3 1195 aaPredicted RBP15.3■□□□□ 0.04
TRAF3IP2-211ENST00000528599 FAM89AQ96GI7 184 aa15.3■□□□□ 0.04
TRAF3IP2-211ENST00000528599 UTP14AQ9BVJ6 771 aaKnown RBP15.3■□□□□ 0.04
TRAF3IP2-211ENST00000528599 ZBTB40Q9NUA8 1239 aa15.3■□□□□ 0.04
TRAF3IP2-211ENST00000528599 POLRMTO00411 1230 aaKnown RBP15.29■□□□□ 0.04
TRAF3IP2-211ENST00000528599 SERPINB2P05120 415 aa15.28■□□□□ 0.04
TRAF3IP2-211ENST00000528599 GNAI3P08754 354 aa15.28■□□□□ 0.04
TRAF3IP2-211ENST00000528599 UBTFL1P0CB47 393 aaPredicted RBP15.28■□□□□ 0.04
TRAF3IP2-211ENST00000528599 NBPF5PQ86XG9 351 aaPredicted RBP15.28■□□□□ 0.04
TRAF3IP2-211ENST00000528599 NUTM1Q86Y26 1132 aa15.28■□□□□ 0.04
TRAF3IP2-211ENST00000528599 SYT17Q9BSW7 474 aa15.28■□□□□ 0.04
TRAF3IP2-211ENST00000528599 KAZALD1Q96I82 304 aa15.28■□□□□ 0.04
TRAF3IP2-211ENST00000528599 C1orf115Q9H7X2 142 aa15.28■□□□□ 0.04
TRAF3IP2-211ENST00000528599 SH3TC1Q8TE82 1336 aa15.27■□□□□ 0.04
TRAF3IP2-211ENST00000528599 ERFEQ4G0M1 354 aa15.27■□□□□ 0.03
TRAF3IP2-211ENST00000528599 TPTE2Q6XPS3 522 aa15.27■□□□□ 0.03
TRAF3IP2-211ENST00000528599 CCDC24Q8N4L8 307 aa15.27■□□□□ 0.03
TRAF3IP2-211ENST00000528599 NLGN2Q8NFZ4 835 aa15.27■□□□□ 0.03
TRAF3IP2-211ENST00000528599 SUCLG2Q96I99 432 aa15.27■□□□□ 0.03
TRAF3IP2-211ENST00000528599 NYXQ9GZU5 481 aa15.27■□□□□ 0.03
TRAF3IP2-211ENST00000528599 NRXN2Q9P2S2 1712 aa15.27■□□□□ 0.03
TRAF3IP2-211ENST00000528599 LRRFIP2Q9Y608 721 aaKnown RBP15.27■□□□□ 0.03
TRAF3IP2-211ENST00000528599 KIF13BQ9NQT8 1826 aa15.27■□□□□ 0.03
TRAF3IP2-211ENST00000528599 CDHR2Q9BYE9 1310 aa15.26■□□□□ 0.03
TRAF3IP2-211ENST00000528599 KIAA1551Q9HCM1 1747 aa15.26■□□□□ 0.03
TRAF3IP2-211ENST00000528599 EPHA10Q5JZY3 1008 aa15.26■□□□□ 0.03
TRAF3IP2-211ENST00000528599 PRR5LQ6MZQ0 368 aa15.26■□□□□ 0.03
TRAF3IP2-211ENST00000528599 CHMP4BQ9H444 224 aaKnown RBP15.26■□□□□ 0.03
TRAF3IP2-211ENST00000528599 PARP3Q9Y6F1 533 aa15.26■□□□□ 0.03
TRAF3IP2-211ENST00000528599 IRS4O14654 1257 aaPredicted RBP15.25■□□□□ 0.03
TRAF3IP2-211ENST00000528599 GNAI2P04899 355 aa15.25■□□□□ 0.03
TRAF3IP2-211ENST00000528599 HCLS1P14317 486 aaPredicted RBP15.25■□□□□ 0.03
TRAF3IP2-211ENST00000528599 KLHL34Q8N239 644 aa15.25■□□□□ 0.03
TRAF3IP2-211ENST00000528599 CNBD1Q8NA66 436 aa15.25■□□□□ 0.03
TRAF3IP2-211ENST00000528599 ABCC12Q96J65 1359 aa15.25■□□□□ 0.03
TRAF3IP2-211ENST00000528599 GTF2E1P29083 439 aaPredicted RBP15.25■□□□□ 0.03
TRAF3IP2-211ENST00000528599 SLC10A5Q5PT55 438 aa15.25■□□□□ 0.03
TRAF3IP2-211ENST00000528599 ERICH6BQ5W0A0 696 aa15.25■□□□□ 0.03
TRAF3IP2-211ENST00000528599 C10orf71Q711Q0 1435 aa15.24■□□□□ 0.03
TRAF3IP2-211ENST00000528599 FOXO4P98177 505 aa15.24■□□□□ 0.03
TRAF3IP2-211ENST00000528599 PLA2G12BQ9BX93 195 aa15.24■□□□□ 0.03
TRAF3IP2-211ENST00000528599 BICC1Q9H694 974 aaKnown RBP15.24■□□□□ 0.03
TRAF3IP2-211ENST00000528599 PCDHB15Q9Y5E8 787 aa15.24■□□□□ 0.03
TRAF3IP2-211ENST00000528599 NPHP1O15259 732 aa15.23■□□□□ 0.03
TRAF3IP2-211ENST00000528599 AAMPQ13685 434 aa15.23■□□□□ 0.03
TRAF3IP2-211ENST00000528599 ANKRD44Q8N8A2 993 aa15.23■□□□□ 0.03
TRAF3IP2-211ENST00000528599 DDX60Q8IY21 1712 aaKnown RBP15.23■□□□□ 0.03
TRAF3IP2-211ENST00000528599 PDE8AO60658 829 aa15.22■□□□□ 0.03
TRAF3IP2-211ENST00000528599 C3orf67Q6ZVT6 689 aa15.22■□□□□ 0.03
TRAF3IP2-211ENST00000528599 HDAC5Q9UQL6 1122 aa15.22■□□□□ 0.03
TRAF3IP2-211ENST00000528599 RABL6Q3YEC7 729 aaPredicted RBP15.22■□□□□ 0.03
TRAF3IP2-211ENST00000528599 LAMB2P55268 1798 aa15.21■□□□□ 0.03
TRAF3IP2-211ENST00000528599 CTSWP56202 376 aa15.21■□□□□ 0.03
TRAF3IP2-211ENST00000528599 ST5P78524 1137 aa15.21■□□□□ 0.03
TRAF3IP2-211ENST00000528599 CEP85Q6P2H3 762 aa15.21■□□□□ 0.03
TRAF3IP2-211ENST00000528599 LMBR1LQ6UX01 489 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms