RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 KIF6Q6ZMV9 814 aa9.48□□□□□ -0.89
SOX6-211ENST00000528429 CERS3Q8IU89 383 aa9.48□□□□□ -0.89
SOX6-211ENST00000528429 SIL1Q9H173 461 aa9.48□□□□□ -0.89
SOX6-211ENST00000528429 ZBTB1Q9Y2K1 713 aa9.48□□□□□ -0.89
SOX6-211ENST00000528429 UBR2Q8IWV8 1755 aa9.47□□□□□ -0.89
SOX6-211ENST00000528429 ATP6V1AP38606 617 aa9.47□□□□□ -0.89
SOX6-211ENST00000528429 EPHA10Q5JZY3 1008 aa9.47□□□□□ -0.89
SOX6-211ENST00000528429 NUTM1Q86Y26 1132 aa9.47□□□□□ -0.89
SOX6-211ENST00000528429 CHMP3Q9Y3E7 222 aa9.47□□□□□ -0.89
SOX6-211ENST00000528429 N4BP2Q86UW6 1770 aaPredicted RBP9.47□□□□□ -0.89
SOX6-211ENST00000528429 PAPPAQ13219 1627 aa9.47□□□□□ -0.89
SOX6-211ENST00000528429 LAMB4A4D0S4 1761 aa9.47□□□□□ -0.89
SOX6-211ENST00000528429 AFF2P51816 1311 aa9.47□□□□□ -0.89
SOX6-211ENST00000528429 NWD2Q9ULI1 1742 aa9.47□□□□□ -0.89
SOX6-211ENST00000528429 CYP19A1P11511 503 aaPredicted RBP9.47□□□□□ -0.89
SOX6-211ENST00000528429 NBR1Q14596 966 aa9.47□□□□□ -0.89
SOX6-211ENST00000528429 KLHDC4Q8TBB5 520 aa9.47□□□□□ -0.89
SOX6-211ENST00000528429 RHPN1Q8TCX5 695 aa9.47□□□□□ -0.89
SOX6-211ENST00000528429 CWC25Q9NXE8 425 aaPredicted RBP9.47□□□□□ -0.89
SOX6-211ENST00000528429 NOP58Q9Y2X3 529 aaKnown RBP9.47□□□□□ -0.89
SOX6-211ENST00000528429 ITGB4P16144 1822 aa9.46□□□□□ -0.89
SOX6-211ENST00000528429 UTYO14607 1347 aa9.46□□□□□ -0.89
SOX6-211ENST00000528429 CLSTN1O94985 981 aa9.46□□□□□ -0.89
SOX6-211ENST00000528429 MX1P20591 662 aa9.46□□□□□ -0.89
SOX6-211ENST00000528429 PDE1AP54750 535 aa9.46□□□□□ -0.89
SOX6-211ENST00000528429 MTX1Q13505 466 aa9.46□□□□□ -0.89
SOX6-211ENST00000528429 KIF1BPQ96EK5 621 aa9.46□□□□□ -0.89
SOX6-211ENST00000528429 LOC102724428A0A0B4J2F2 783 aa9.46□□□□□ -0.9
SOX6-211ENST00000528429 RAB11FIP3O75154 756 aa9.46□□□□□ -0.9
SOX6-211ENST00000528429 SIK1P57059 783 aa9.46□□□□□ -0.9
SOX6-211ENST00000528429 HSP90AB4PQ58FF6 505 aa9.46□□□□□ -0.9
SOX6-211ENST00000528429 TBC1D9Q6ZT07 1266 aa9.46□□□□□ -0.9
SOX6-211ENST00000528429 TBC1D2BQ9UPU7 963 aa9.46□□□□□ -0.9
SOX6-211ENST00000528429 DOT1LQ8TEK3 1739 aa9.46□□□□□ -0.9
SOX6-211ENST00000528429 GPTP24298 496 aa9.45□□□□□ -0.9
SOX6-211ENST00000528429 SLC4A3P48751 1232 aa9.45□□□□□ -0.9
SOX6-211ENST00000528429 KCNQ4P56696 695 aa9.45□□□□□ -0.9
SOX6-211ENST00000528429 WNK3Q9BYP7 1800 aa9.45□□□□□ -0.9
SOX6-211ENST00000528429 PALLDQ8WX93 1383 aa9.45□□□□□ -0.9
SOX6-211ENST00000528429 PATL2C9JE40 543 aaKnown RBP9.45□□□□□ -0.9
SOX6-211ENST00000528429 CDC45O75419 566 aa9.45□□□□□ -0.9
SOX6-211ENST00000528429 SDSP20132 328 aa9.45□□□□□ -0.9
SOX6-211ENST00000528429 PTF1AQ7RTS3 328 aa9.45□□□□□ -0.9
SOX6-211ENST00000528429 PSMD1Q99460 953 aa9.45□□□□□ -0.9
SOX6-211ENST00000528429 TRIM6-TRIM34B2RNG4 842 aa9.44□□□□□ -0.9
SOX6-211ENST00000528429 G3BP1Q13283 466 aaKnown RBP eCLIP9.44□□□□□ -0.9
SOX6-211ENST00000528429 LMBR1LQ6UX01 489 aa9.44□□□□□ -0.9
SOX6-211ENST00000528429 DDRGK1Q96HY6 314 aa9.44□□□□□ -0.9
SOX6-211ENST00000528429 GJD4Q96KN9 370 aaPredicted RBP9.44□□□□□ -0.9
SOX6-211ENST00000528429 PLCD4Q9BRC7 762 aa9.44□□□□□ -0.9
SOX6-211ENST00000528429 PRDM4Q9UKN5 801 aa9.44□□□□□ -0.9
SOX6-211ENST00000528429 CRKLP46109 303 aaKnown RBP9.44□□□□□ -0.9
SOX6-211ENST00000528429 TCIRG1Q13488 830 aa9.44□□□□□ -0.9
SOX6-211ENST00000528429 ITPK1Q13572 414 aa9.44□□□□□ -0.9
SOX6-211ENST00000528429 HLFQ16534 295 aa9.44□□□□□ -0.9
SOX6-211ENST00000528429 DZIP3Q86Y13 1208 aaKnown RBP9.44□□□□□ -0.9
SOX6-211ENST00000528429 CLASRPQ8N2M8 674 aaKnown RBP9.44□□□□□ -0.9
SOX6-211ENST00000528429 CCDC191Q8NCU4 936 aa9.44□□□□□ -0.9
SOX6-211ENST00000528429 TBC1D32Q96NH3 1257 aa9.44□□□□□ -0.9
SOX6-211ENST00000528429 C22orf23Q9BZE7 217 aa9.44□□□□□ -0.9
SOX6-211ENST00000528429 MAP3K15Q6ZN16 1313 aa9.43□□□□□ -0.9
SOX6-211ENST00000528429 RILPL2Q969X0 211 aa9.43□□□□□ -0.9
SOX6-211ENST00000528429 ARFGEF2Q9Y6D5 1785 aa9.43□□□□□ -0.9
SOX6-211ENST00000528429 MAP4K4O95819 1239 aaPredicted RBP9.43□□□□□ -0.9
SOX6-211ENST00000528429 SMARCC1Q92922 1105 aaPredicted RBP9.43□□□□□ -0.9
SOX6-211ENST00000528429 FAM89AQ96GI7 184 aa9.43□□□□□ -0.9
SOX6-211ENST00000528429 CCDC85AQ96PX6 553 aaPredicted RBP9.43□□□□□ -0.9
SOX6-211ENST00000528429 CCDC87Q9NVE4 849 aa9.43□□□□□ -0.9
SOX6-211ENST00000528429 H7C1W4 665 aa9.42□□□□□ -0.9
SOX6-211ENST00000528429 CASP7P55210 303 aa9.42□□□□□ -0.9
SOX6-211ENST00000528429 AACSQ86V21 672 aa9.42□□□□□ -0.9
SOX6-211ENST00000528429 ERC1Q8IUD2 1116 aa9.42□□□□□ -0.9
SOX6-211ENST00000528429 SALL3Q9BXA9 1300 aa9.42□□□□□ -0.9
SOX6-211ENST00000528429 FAM177BA6PVY3 158 aa9.42□□□□□ -0.9
SOX6-211ENST00000528429 IFIT2P09913 472 aaKnown RBP9.42□□□□□ -0.9
SOX6-211ENST00000528429 IL6STP40189 918 aaPredicted RBP9.42□□□□□ -0.9
SOX6-211ENST00000528429 CASC1Q6TDU7 716 aa9.42□□□□□ -0.9
SOX6-211ENST00000528429 GIGYF2Q6Y7W6 1299 aaKnown RBP9.42□□□□□ -0.9
SOX6-211ENST00000528429 ZNF830Q96NB3 372 aaPredicted RBP9.42□□□□□ -0.9
SOX6-211ENST00000528429 ISCA1Q9BUE6 129 aa9.42□□□□□ -0.9
SOX6-211ENST00000528429 OSBPL3Q9H4L5 887 aa9.42□□□□□ -0.9
SOX6-211ENST00000528429 TRPC5Q9UL62 973 aaPredicted RBP9.42□□□□□ -0.9
SOX6-211ENST00000528429 SASH1O94885 1247 aa9.41□□□□□ -0.9
SOX6-211ENST00000528429 HSP90AA2PQ14568 343 aaPredicted RBP9.41□□□□□ -0.9
SOX6-211ENST00000528429 INTS5Q6P9B9 1019 aaKnown RBP9.41□□□□□ -0.9
SOX6-211ENST00000528429 SYNE4Q8N205 404 aa9.41□□□□□ -0.9
SOX6-211ENST00000528429 QTRT2Q9H974 415 aaKnown RBP9.41□□□□□ -0.9
SOX6-211ENST00000528429 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.41□□□□□ -0.9
SOX6-211ENST00000528429 EP400Q96L91 3159 aa9.41□□□□□ -0.9
SOX6-211ENST00000528429 FOXO4P98177 505 aa9.41□□□□□ -0.9
SOX6-211ENST00000528429 RABL6Q3YEC7 729 aaPredicted RBP9.41□□□□□ -0.9
SOX6-211ENST00000528429 SEPT12Q8IYM1 358 aa9.41□□□□□ -0.9
SOX6-211ENST00000528429 CCDC8Q9H0W5 538 aaPredicted RBP9.41□□□□□ -0.9
SOX6-211ENST00000528429 AFDNP55196 1824 aaKnown RBP9.41□□□□□ -0.9
SOX6-211ENST00000528429 FAM193AP78312 1265 aa9.4□□□□□ -0.9
SOX6-211ENST00000528429 PTPN12Q05209 780 aaKnown RBP9.4□□□□□ -0.9
SOX6-211ENST00000528429 GRIPAP1Q4V328 841 aa9.4□□□□□ -0.9
SOX6-211ENST00000528429 STAP2Q9UGK3 403 aa9.4□□□□□ -0.9
SOX6-211ENST00000528429 EIF5P55010 431 aaKnown RBP9.4□□□□□ -0.9
SOX6-211ENST00000528429 HSP90AB3PQ58FF7 597 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms