RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	TNRC6C	Q9HCJ0	1690 aa	Known RBP	15.2	■□□□□ 0.02
PSMC3-205	ENST00000528362	PHAX	Q9H814	394 aa	Known RBP	15.2	■□□□□ 0.02
PSMC3-205	ENST00000528362	RNF123	Q5XPI4	1314 aa		15.19	■□□□□ 0.02
PSMC3-205	ENST00000528362	FANCI	Q9NVI1	1328 aa		15.19	■□□□□ 0.02
PSMC3-205	ENST00000528362	SOGA3	Q5TF21	947 aa		15.19	■□□□□ 0.02
PSMC3-205	ENST00000528362	CCDC30	Q5VVM6	783 aa		15.19	■□□□□ 0.02
PSMC3-205	ENST00000528362	OLFM4	Q6UX06	510 aa		15.19	■□□□□ 0.02
PSMC3-205	ENST00000528362	WDR63	Q8IWG1	891 aa		15.19	■□□□□ 0.02
PSMC3-205	ENST00000528362	ISCA1	Q9BUE6	129 aa		15.19	■□□□□ 0.02
PSMC3-205	ENST00000528362	LTBP3	Q9NS15	1303 aa		15.18	■□□□□ 0.02
PSMC3-205	ENST00000528362	KIF3C	O14782	793 aa		15.18	■□□□□ 0.02
PSMC3-205	ENST00000528362	HOXA10	P31260	410 aa	Predicted RBP	15.18	■□□□□ 0.02
PSMC3-205	ENST00000528362	CCDC93	Q567U6	631 aa		15.18	■□□□□ 0.02
PSMC3-205	ENST00000528362	SLC10A5	Q5PT55	438 aa		15.18	■□□□□ 0.02
PSMC3-205	ENST00000528362	SYNE4	Q8N205	404 aa		15.18	■□□□□ 0.02
PSMC3-205	ENST00000528362	ZNF428	Q96B54	188 aa		15.18	■□□□□ 0.02
PSMC3-205	ENST00000528362	TAOK3	Q9H2K8	898 aa		15.18	■□□□□ 0.02
PSMC3-205	ENST00000528362	ZC3H4	Q9UPT8	1303 aa	Known RBP	15.17	■□□□□ 0.02
PSMC3-205	ENST00000528362	ATP5J2-PTCD1	G3V325	749 aa		15.17	■□□□□ 0.02
PSMC3-205	ENST00000528362	HCLS1	P14317	486 aa	Predicted RBP	15.17	■□□□□ 0.02
PSMC3-205	ENST00000528362	ALDH1B1	P30837	517 aa		15.17	■□□□□ 0.02
PSMC3-205	ENST00000528362	GOLGA2	Q08379	1002 aa		15.17	■□□□□ 0.02
PSMC3-205	ENST00000528362	TWISTNB	Q3B726	338 aa	Predicted RBP	15.17	■□□□□ 0.02
PSMC3-205	ENST00000528362	RPGR	Q92834	1020 aa	Known RBP	15.17	■□□□□ 0.02
PSMC3-205	ENST00000528362	NMRK2	Q9NPI5	230 aa		15.17	■□□□□ 0.02
PSMC3-205	ENST00000528362	SPINK5	Q9NQ38	1064 aa	Predicted RBP	15.17	■□□□□ 0.02
PSMC3-205	ENST00000528362	TRMT112	Q9UI30	125 aa	Known RBP	15.17	■□□□□ 0.02
PSMC3-205	ENST00000528362	NUP98	P52948	1817 aa		15.17	■□□□□ 0.02
PSMC3-205	ENST00000528362	TCERG1	O14776	1098 aa	Known RBP	15.16	■□□□□ 0.02
PSMC3-205	ENST00000528362	RIC3	Q7Z5B4	369 aa		15.16	■□□□□ 0.02
PSMC3-205	ENST00000528362	SLC51A	Q86UW1	340 aa		15.16	■□□□□ 0.02
PSMC3-205	ENST00000528362	NLRP3	Q96P20	1036 aa		15.16	■□□□□ 0.02
PSMC3-205	ENST00000528362	CHMP4A	Q9BY43	222 aa		15.16	■□□□□ 0.02
PSMC3-205	ENST00000528362	SH3TC1	Q8TE82	1336 aa		15.16	■□□□□ 0.02
PSMC3-205	ENST00000528362	SLX4	Q8IY92	1834 aa		15.15	■□□□□ 0.02
PSMC3-205	ENST00000528362	TRIM28	Q13263	835 aa	Known RBP	15.15	■□□□□ 0.02
PSMC3-205	ENST00000528362	RBM17	Q96I25	401 aa	Known RBP	15.15	■□□□□ 0.02
PSMC3-205	ENST00000528362	CRAMP1	Q96RY5	1269 aa		15.15	■□□□□ 0.02
PSMC3-205	ENST00000528362	SNED1	Q8TER0	1413 aa		15.15	■□□□□ 0.02
PSMC3-205	ENST00000528362	ZNF521	Q96K83	1311 aa		15.15	■□□□□ 0.02
PSMC3-205	ENST00000528362	FKBP4	Q02790	459 aa	Known RBP eCLIP	15.14	■□□□□ 0.01
PSMC3-205	ENST00000528362	RTKN2	Q8IZC4	609 aa		15.14	■□□□□ 0.01
PSMC3-205	ENST00000528362	FAM89A	Q96GI7	184 aa		15.14	■□□□□ 0.01
PSMC3-205	ENST00000528362	STK31	Q9BXU1	1019 aa		15.14	■□□□□ 0.01
PSMC3-205	ENST00000528362	KDM2B	Q8NHM5	1336 aa		15.14	■□□□□ 0.01
PSMC3-205	ENST00000528362	EXOSC9	Q06265	439 aa	Known RBP	15.13	■□□□□ 0.01
PSMC3-205	ENST00000528362	MYD88	Q99836	296 aa		15.13	■□□□□ 0.01
PSMC3-205	ENST00000528362	ZNF277	Q9NRM2	450 aa	Predicted RBP	15.13	■□□□□ 0.01
PSMC3-205	ENST00000528362	ABCC4	O15439	1325 aa		15.13	■□□□□ 0.01
PSMC3-205	ENST00000528362	GLTPD2	A6NH11	291 aa		15.12	■□□□□ 0.01
PSMC3-205	ENST00000528362	PPEF1	O14829	653 aa	Predicted RBP	15.12	■□□□□ 0.01
PSMC3-205	ENST00000528362	VAMP4	O75379	141 aa		15.12	■□□□□ 0.01
PSMC3-205	ENST00000528362	DDX58	O95786	925 aa	Known RBP	15.12	■□□□□ 0.01
PSMC3-205	ENST00000528362	G2E3	Q7L622	706 aa		15.12	■□□□□ 0.01
PSMC3-205	ENST00000528362	METTL22	Q9BUU2	404 aa	Predicted RBP	15.12	■□□□□ 0.01
PSMC3-205	ENST00000528362	PI4KAP2	A4QPH2	592 aa		15.11	■□□□□ 0.01
PSMC3-205	ENST00000528362	SLC4A2	P04920	1241 aa		15.11	■□□□□ 0.01
PSMC3-205	ENST00000528362	RTL5	Q5HYW3	569 aa	Predicted RBP	15.11	■□□□□ 0.01
PSMC3-205	ENST00000528362	CC2D2B	Q6DHV5	1058 aa		15.11	■□□□□ 0.01
PSMC3-205	ENST00000528362	KSR2	Q6VAB6	950 aa		15.11	■□□□□ 0.01
PSMC3-205	ENST00000528362	PI4KAP1	Q8N8J0	262 aa		15.11	■□□□□ 0.01
PSMC3-205	ENST00000528362	MYH16	Q9H6N6	1097 aa		15.11	■□□□□ 0.01
PSMC3-205	ENST00000528362	MAP3K2	Q9Y2U5	619 aa		15.11	■□□□□ 0.01
PSMC3-205	ENST00000528362	ARFGEF2	Q9Y6D5	1785 aa		15.11	■□□□□ 0.01
PSMC3-205	ENST00000528362	CCER2	I3L3R5	266 aa		15.1	■□□□□ 0.01
PSMC3-205	ENST00000528362	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	15.1	■□□□□ 0.01
PSMC3-205	ENST00000528362	CCDC191	Q8NCU4	936 aa		15.1	■□□□□ 0.01
PSMC3-205	ENST00000528362	PSMD1	Q99460	953 aa		15.1	■□□□□ 0.01
PSMC3-205	ENST00000528362	RRAGC	Q9HB90	399 aa		15.1	■□□□□ 0.01
PSMC3-205	ENST00000528362	ANKRD36C	Q5JPF3	1778 aa		15.09	■□□□□ 0.01
PSMC3-205	ENST00000528362	IRS4	O14654	1257 aa	Predicted RBP	15.09	■□□□□ 0.01
PSMC3-205	ENST00000528362	IGKV5-2	P06315	115 aa		15.09	■□□□□ 0.01
PSMC3-205	ENST00000528362	FLII	Q13045	1269 aa		15.09	■□□□□ 0.01
PSMC3-205	ENST00000528362	GRAP	Q13588	217 aa		15.09	■□□□□ 0.01
PSMC3-205	ENST00000528362	SF3B3	Q15393	1217 aa	Known RBP	15.09	■□□□□ 0.01
PSMC3-205	ENST00000528362	GRAPL	Q8TC17	118 aa	Predicted RBP	15.09	■□□□□ 0.01
PSMC3-205	ENST00000528362	CWC25	Q9NXE8	425 aa	Predicted RBP	15.09	■□□□□ 0.01
PSMC3-205	ENST00000528362	ATP6V0A2	Q9Y487	856 aa		15.09	■□□□□ 0.01
PSMC3-205	ENST00000528362	SBF1	O95248	1867 aa		15.08	■□□□□ 0.01
PSMC3-205	ENST00000528362	FER1L6	Q2WGJ9	1857 aa		15.08	■□□□□ 0.01
PSMC3-205	ENST00000528362	TOMM70	O94826	608 aa		15.08	■□□□□ 0
PSMC3-205	ENST00000528362	PCCA	P05165	728 aa	Predicted RBP	15.08	■□□□□ 0
PSMC3-205	ENST00000528362	IARS	P41252	1262 aa	Known RBP	15.08	■□□□□ 0
PSMC3-205	ENST00000528362	DDX46	Q7L014	1031 aa	Known RBP	15.08	■□□□□ 0
PSMC3-205	ENST00000528362	BBOX1	O75936	387 aa		15.07	■□□□□ 0
PSMC3-205	ENST00000528362	GRIPAP1	Q4V328	841 aa		15.07	■□□□□ 0
PSMC3-205	ENST00000528362	JARID2	Q92833	1246 aa	Predicted RBP	15.07	■□□□□ 0
PSMC3-205	ENST00000528362	POTEC	B2RU33	542 aa		15.06	■□□□□ 0
PSMC3-205	ENST00000528362	DDN	O94850	711 aa	Predicted RBP	15.06	■□□□□ 0
PSMC3-205	ENST00000528362	HSPA6	P17066	643 aa		15.06	■□□□□ 0
PSMC3-205	ENST00000528362	CWF19L2	Q2TBE0	894 aa	Known RBP	15.06	■□□□□ 0
PSMC3-205	ENST00000528362	DPY19L2	Q6NUT2	758 aa		15.06	■□□□□ 0
PSMC3-205	ENST00000528362	ZNF541	Q9H0D2	1346 aa		15.06	■□□□□ 0
PSMC3-205	ENST00000528362	TIAM2	Q8IVF5	1701 aa		15.06	■□□□□ 0
PSMC3-205	ENST00000528362	NEURL1B	A8MQ27	555 aa		15.05	■□□□□ -0
PSMC3-205	ENST00000528362	VEGFA	P15692	232 aa	Predicted RBP	15.05	■□□□□ -0
PSMC3-205	ENST00000528362	NEXN	Q0ZGT2	675 aa		15.05	■□□□□ -0
PSMC3-205	ENST00000528362	FKBP5	Q13451	457 aa	Predicted RBP	15.05	■□□□□ -0
PSMC3-205	ENST00000528362	SP8	Q8IXZ3	490 aa		15.05	■□□□□ -0
PSMC3-205	ENST00000528362	C16orf71	Q8IYS4	520 aa	Predicted RBP	15.05	■□□□□ -0

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms