RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 TCIRG1Q13488 830 aa20.08■□□□□ 0.81
CAPN1-213ENST00000527897 CCDC27Q2M243 656 aa20.08■□□□□ 0.81
CAPN1-213ENST00000527897 SOGA3Q5TF21 947 aa20.08■□□□□ 0.81
CAPN1-213ENST00000527897 ANKRD13DQ6ZTN6 518 aa20.08■□□□□ 0.81
CAPN1-213ENST00000527897 TAOK3Q9H2K8 898 aa20.08■□□□□ 0.81
CAPN1-213ENST00000527897 TIAM2Q8IVF5 1701 aa20.07■□□□□ 0.8
CAPN1-213ENST00000527897 CCDC93Q567U6 631 aa20.07■□□□□ 0.8
CAPN1-213ENST00000527897 OLFM4Q6UX06 510 aa20.07■□□□□ 0.8
CAPN1-213ENST00000527897 NLRP10Q86W26 655 aa20.07■□□□□ 0.8
CAPN1-213ENST00000527897 TSPYL6Q8N831 410 aa20.07■□□□□ 0.8
CAPN1-213ENST00000527897 PLBD2Q8NHP8 589 aa20.07■□□□□ 0.8
CAPN1-213ENST00000527897 TRMT112Q9UI30 125 aaKnown RBP20.07■□□□□ 0.8
CAPN1-213ENST00000527897 KDM2BQ8NHM5 1336 aa20.06■□□□□ 0.8
CAPN1-213ENST00000527897 KIF3CO14782 793 aa20.06■□□□□ 0.8
CAPN1-213ENST00000527897 NLRP3Q96P20 1036 aa20.06■□□□□ 0.8
CAPN1-213ENST00000527897 PHAXQ9H814 394 aaKnown RBP20.06■□□□□ 0.8
CAPN1-213ENST00000527897 ATP5J2-PTCD1G3V325 749 aa20.05■□□□□ 0.8
CAPN1-213ENST00000527897 TCERG1O14776 1098 aaKnown RBP20.05■□□□□ 0.8
CAPN1-213ENST00000527897 GOLGA2Q08379 1002 aa20.05■□□□□ 0.8
CAPN1-213ENST00000527897 CRY2Q49AN0 593 aa20.05■□□□□ 0.8
CAPN1-213ENST00000527897 CCDC30Q5VVM6 783 aa20.05■□□□□ 0.8
CAPN1-213ENST00000527897 C3orf67Q6ZVT6 689 aa20.05■□□□□ 0.8
CAPN1-213ENST00000527897 RIC3Q7Z5B4 369 aa20.05■□□□□ 0.8
CAPN1-213ENST00000527897 HCLS1P14317 486 aaPredicted RBP20.04■□□□□ 0.8
CAPN1-213ENST00000527897 SYNE4Q8N205 404 aa20.04■□□□□ 0.8
CAPN1-213ENST00000527897 C7orf43Q8WVR3 580 aa20.04■□□□□ 0.8
CAPN1-213ENST00000527897 RBM17Q96I25 401 aaKnown RBP20.04■□□□□ 0.8
CAPN1-213ENST00000527897 RIC1Q4ADV7 1423 aa20.03■□□□□ 0.8
CAPN1-213ENST00000527897 RTL5Q5HYW3 569 aaPredicted RBP20.03■□□□□ 0.8
CAPN1-213ENST00000527897 C16orf71Q8IYS4 520 aaPredicted RBP20.03■□□□□ 0.8
CAPN1-213ENST00000527897 RRAGCQ9HB90 399 aa20.03■□□□□ 0.8
CAPN1-213ENST00000527897 SH3TC1Q8TE82 1336 aa20.02■□□□□ 0.8
CAPN1-213ENST00000527897 DICER1Q9UPY3 1922 aaKnown RBP20.02■□□□□ 0.8
CAPN1-213ENST00000527897 CHMP4AQ9BY43 222 aa20.02■□□□□ 0.8
CAPN1-213ENST00000527897 IL16Q14005 1332 aa20.02■□□□□ 0.79
CAPN1-213ENST00000527897 LTBP3Q9NS15 1303 aa20.02■□□□□ 0.79
CAPN1-213ENST00000527897 ZC3H4Q9UPT8 1303 aaKnown RBP20.02■□□□□ 0.79
CAPN1-213ENST00000527897 TWISTNBQ3B726 338 aaPredicted RBP20.01■□□□□ 0.79
CAPN1-213ENST00000527897 STK31Q9BXU1 1019 aa20.01■□□□□ 0.79
CAPN1-213ENST00000527897 ZNF277Q9NRM2 450 aaPredicted RBP20.01■□□□□ 0.79
CAPN1-213ENST00000527897 RNF123Q5XPI4 1314 aa20.01■□□□□ 0.79
CAPN1-213ENST00000527897 GLTPD2A6NH11 291 aa20■□□□□ 0.79
CAPN1-213ENST00000527897 PPEF1O14829 653 aaPredicted RBP20■□□□□ 0.79
CAPN1-213ENST00000527897 HOXA10P31260 410 aaPredicted RBP20■□□□□ 0.79
CAPN1-213ENST00000527897 FKBP4Q02790 459 aaKnown RBP eCLIP20■□□□□ 0.79
CAPN1-213ENST00000527897 SLC10A5Q5PT55 438 aa20■□□□□ 0.79
CAPN1-213ENST00000527897 RTKN2Q8IZC4 609 aa20■□□□□ 0.79
CAPN1-213ENST00000527897 FAM89AQ96GI7 184 aa20■□□□□ 0.79
CAPN1-213ENST00000527897 MYD88Q99836 296 aa20■□□□□ 0.79
CAPN1-213ENST00000527897 ISCA1Q9BUE6 129 aa20■□□□□ 0.79
CAPN1-213ENST00000527897 LAMB2P55268 1798 aa20■□□□□ 0.79
CAPN1-213ENST00000527897 FANCIQ9NVI1 1328 aa20■□□□□ 0.79
CAPN1-213ENST00000527897 DDX58O95786 925 aaKnown RBP19.99■□□□□ 0.79
CAPN1-213ENST00000527897 NCBP3Q53F19 620 aaKnown RBP19.99■□□□□ 0.79
CAPN1-213ENST00000527897 DPY19L2Q6NUT2 758 aa19.99■□□□□ 0.79
CAPN1-213ENST00000527897 WDR63Q8IWG1 891 aa19.99■□□□□ 0.79
CAPN1-213ENST00000527897 CRAMP1Q96RY5 1269 aa19.99■□□□□ 0.79
CAPN1-213ENST00000527897 TOMM70O94826 608 aa19.98■□□□□ 0.79
CAPN1-213ENST00000527897 SLC51AQ86UW1 340 aa19.98■□□□□ 0.79
CAPN1-213ENST00000527897 ABCC4O15439 1325 aa19.98■□□□□ 0.79
CAPN1-213ENST00000527897 TMX4Q9H1E5 349 aaPredicted RBP19.97■□□□□ 0.79
CAPN1-213ENST00000527897 DDX46Q7L014 1031 aaKnown RBP19.96■□□□□ 0.79
CAPN1-213ENST00000527897 DDX60Q8IY21 1712 aaKnown RBP19.96■□□□□ 0.79
CAPN1-213ENST00000527897 TAF1P21675 1872 aa19.95■□□□□ 0.78
CAPN1-213ENST00000527897 SLC4A2P04920 1241 aa19.95■□□□□ 0.78
CAPN1-213ENST00000527897 EXOSC9Q06265 439 aaKnown RBP19.95■□□□□ 0.78
CAPN1-213ENST00000527897 CC2D2BQ6DHV5 1058 aa19.95■□□□□ 0.78
CAPN1-213ENST00000527897 MAP3K2Q9Y2U5 619 aa19.95■□□□□ 0.78
CAPN1-213ENST00000527897 DDNO94850 711 aaPredicted RBP19.94■□□□□ 0.78
CAPN1-213ENST00000527897 VEGFAP15692 232 aaPredicted RBP19.94■□□□□ 0.78
CAPN1-213ENST00000527897 IARSP41252 1262 aaKnown RBP19.94■□□□□ 0.78
CAPN1-213ENST00000527897 SPINK5Q9NQ38 1064 aaPredicted RBP19.94■□□□□ 0.78
CAPN1-213ENST00000527897 CEP350Q5VT06 3117 aa19.94■□□□□ 0.78
CAPN1-213ENST00000527897 PI4KAP2A4QPH2 592 aa19.93■□□□□ 0.78
CAPN1-213ENST00000527897 IRS4O14654 1257 aaPredicted RBP19.93■□□□□ 0.78
CAPN1-213ENST00000527897 TRIM28Q13263 835 aaKnown RBP19.93■□□□□ 0.78
CAPN1-213ENST00000527897 G2E3Q7L622 706 aa19.93■□□□□ 0.78
CAPN1-213ENST00000527897 PI4KAP1Q8N8J0 262 aa19.93■□□□□ 0.78
CAPN1-213ENST00000527897 JARID2Q92833 1246 aaPredicted RBP19.93■□□□□ 0.78
CAPN1-213ENST00000527897 METTL22Q9BUU2 404 aaPredicted RBP19.93■□□□□ 0.78
CAPN1-213ENST00000527897 MYH16Q9H6N6 1097 aa19.93■□□□□ 0.78
CAPN1-213ENST00000527897 HSPA6P17066 643 aa19.92■□□□□ 0.78
CAPN1-213ENST00000527897 KSR2Q6VAB6 950 aa19.92■□□□□ 0.78
CAPN1-213ENST00000527897 RBM46Q8TBY0 533 aaKnown RBP19.92■□□□□ 0.78
CAPN1-213ENST00000527897 PSMD1Q99460 953 aa19.92■□□□□ 0.78
CAPN1-213ENST00000527897 CWC25Q9NXE8 425 aaPredicted RBP19.92■□□□□ 0.78
CAPN1-213ENST00000527897 ATP6V0A2Q9Y487 856 aa19.92■□□□□ 0.78
CAPN1-213ENST00000527897 GRAPQ13588 217 aa19.91■□□□□ 0.78
CAPN1-213ENST00000527897 ZBTB38Q8NAP3 1195 aaPredicted RBP19.91■□□□□ 0.78
CAPN1-213ENST00000527897 CCDC191Q8NCU4 936 aa19.91■□□□□ 0.78
CAPN1-213ENST00000527897 GRAPLQ8TC17 118 aaPredicted RBP19.91■□□□□ 0.78
CAPN1-213ENST00000527897 JDP2Q8WYK2 163 aa19.91■□□□□ 0.78
CAPN1-213ENST00000527897 VAMP4O75379 141 aa19.9■□□□□ 0.78
CAPN1-213ENST00000527897 BBOX1O75936 387 aa19.9■□□□□ 0.78
CAPN1-213ENST00000527897 NEXNQ0ZGT2 675 aa19.9■□□□□ 0.78
CAPN1-213ENST00000527897 GRIPAP1Q4V328 841 aa19.9■□□□□ 0.78
CAPN1-213ENST00000527897 LARGE2Q8N3Y3 721 aa19.9■□□□□ 0.78
CAPN1-213ENST00000527897 ZNF541Q9H0D2 1346 aa19.9■□□□□ 0.78
CAPN1-213ENST00000527897 SNED1Q8TER0 1413 aa19.9■□□□□ 0.78
CAPN1-213ENST00000527897 FLIIQ13045 1269 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms