RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 PROSER3Q2NL68 480 aa18.47■□□□□ 0.55
CAPN1-212ENST00000527887 PSMD1Q99460 953 aa18.47■□□□□ 0.55
CAPN1-212ENST00000527887 CHMP4AQ9BY43 222 aa18.47■□□□□ 0.55
CAPN1-212ENST00000527887 FER1L6Q2WGJ9 1857 aa18.47■□□□□ 0.55
CAPN1-212ENST00000527887 POTECB2RU33 542 aa18.46■□□□□ 0.55
CAPN1-212ENST00000527887 TCIRG1Q13488 830 aa18.46■□□□□ 0.55
CAPN1-212ENST00000527887 HDGFL1Q5TGJ6 251 aa18.46■□□□□ 0.55
CAPN1-212ENST00000527887 XAGE3Q8WTP9 111 aa18.46■□□□□ 0.55
CAPN1-212ENST00000527887 DBF4Q9UBU7 674 aaPredicted RBP18.46■□□□□ 0.55
CAPN1-212ENST00000527887 ARFGEF2Q9Y6D5 1785 aa18.45■□□□□ 0.54
CAPN1-212ENST00000527887 APAF1O14727 1248 aa18.45■□□□□ 0.54
CAPN1-212ENST00000527887 ANXA1P04083 346 aa18.45■□□□□ 0.54
CAPN1-212ENST00000527887 ZNF853P0CG23 659 aa18.45■□□□□ 0.54
CAPN1-212ENST00000527887 AIMP1Q12904 312 aaKnown RBP18.45■□□□□ 0.54
CAPN1-212ENST00000527887 DNAJC5GQ8N7S2 189 aa18.45■□□□□ 0.54
CAPN1-212ENST00000527887 IFT57Q9NWB7 429 aa18.45■□□□□ 0.54
CAPN1-212ENST00000527887 IQCA1LA6NCM1 817 aa18.44■□□□□ 0.54
CAPN1-212ENST00000527887 GNAI1P63096 354 aa18.44■□□□□ 0.54
CAPN1-212ENST00000527887 SYNE4Q8N205 404 aa18.44■□□□□ 0.54
CAPN1-212ENST00000527887 NECTIN2Q92692 538 aa18.44■□□□□ 0.54
CAPN1-212ENST00000527887 TMX4Q9H1E5 349 aaPredicted RBP18.44■□□□□ 0.54
CAPN1-212ENST00000527887 HYPKQ9NX55 129 aa18.44■□□□□ 0.54
CAPN1-212ENST00000527887 DDNO94850 711 aaPredicted RBP18.43■□□□□ 0.54
CAPN1-212ENST00000527887 IARSP41252 1262 aaKnown RBP18.43■□□□□ 0.54
CAPN1-212ENST00000527887 KRT24Q2M2I5 525 aa18.43■□□□□ 0.54
CAPN1-212ENST00000527887 NLRP10Q86W26 655 aa18.43■□□□□ 0.54
CAPN1-212ENST00000527887 PLBD2Q8NHP8 589 aa18.43■□□□□ 0.54
CAPN1-212ENST00000527887 L3MBTL3Q96JM7 780 aaPredicted RBP18.43■□□□□ 0.54
CAPN1-212ENST00000527887 ZNF277Q9NRM2 450 aaPredicted RBP18.43■□□□□ 0.54
CAPN1-212ENST00000527887 MBIPQ9NS73 344 aa18.43■□□□□ 0.54
CAPN1-212ENST00000527887 CHPF2Q9P2E5 772 aa18.43■□□□□ 0.54
CAPN1-212ENST00000527887 NUP98P52948 1817 aa18.43■□□□□ 0.54
CAPN1-212ENST00000527887 DUSP27Q5VZP5 1158 aa18.42■□□□□ 0.54
CAPN1-212ENST00000527887 ANKRD13DQ6ZTN6 518 aa18.42■□□□□ 0.54
CAPN1-212ENST00000527887 JDP2Q8WYK2 163 aa18.42■□□□□ 0.54
CAPN1-212ENST00000527887 VPS33BQ9H267 617 aa18.42■□□□□ 0.54
CAPN1-212ENST00000527887 WDR90Q96KV7 1748 aa18.42■□□□□ 0.54
CAPN1-212ENST00000527887 TIAM2Q8IVF5 1701 aa18.41■□□□□ 0.54
CAPN1-212ENST00000527887 FZD9O00144 591 aa18.41■□□□□ 0.54
CAPN1-212ENST00000527887 TRMT112Q9UI30 125 aaKnown RBP18.41■□□□□ 0.54
CAPN1-212ENST00000527887 SH3TC1Q8TE82 1336 aa18.41■□□□□ 0.54
CAPN1-212ENST00000527887 PPEF1O14829 653 aaPredicted RBP18.4■□□□□ 0.54
CAPN1-212ENST00000527887 BBOX1O75936 387 aa18.4■□□□□ 0.54
CAPN1-212ENST00000527887 OLFM4Q6UX06 510 aa18.4■□□□□ 0.54
CAPN1-212ENST00000527887 DICER1Q9UPY3 1922 aaKnown RBP18.4■□□□□ 0.54
CAPN1-212ENST00000527887 SNED1Q8TER0 1413 aa18.4■□□□□ 0.54
CAPN1-212ENST00000527887 TRIM28Q13263 835 aaKnown RBP18.39■□□□□ 0.53
CAPN1-212ENST00000527887 NCBP3Q53F19 620 aaKnown RBP18.39■□□□□ 0.53
CAPN1-212ENST00000527887 ATP6V0A2Q9Y487 856 aa18.39■□□□□ 0.53
CAPN1-212ENST00000527887 CCDC88AQ3V6T2 1871 aa18.38■□□□□ 0.53
CAPN1-212ENST00000527887 CHADLQ6NUI6 762 aa18.38■□□□□ 0.53
CAPN1-212ENST00000527887 GPC2Q8N158 579 aa18.38■□□□□ 0.53
CAPN1-212ENST00000527887 KLRG1Q96E93 195 aa18.38■□□□□ 0.53
CAPN1-212ENST00000527887 ISCA1Q9BUE6 129 aa18.38■□□□□ 0.53
CAPN1-212ENST00000527887 CCDC27Q2M243 656 aa18.37■□□□□ 0.53
CAPN1-212ENST00000527887 C3orf67Q6ZVT6 689 aa18.37■□□□□ 0.53
CAPN1-212ENST00000527887 DDX46Q7L014 1031 aaKnown RBP18.37■□□□□ 0.53
CAPN1-212ENST00000527887 TMC4Q7Z404 712 aa18.37■□□□□ 0.53
CAPN1-212ENST00000527887 SUPT20HQ8NEM7 779 aa18.37■□□□□ 0.53
CAPN1-212ENST00000527887 TAF1DQ9H5J8 278 aaPredicted RBP18.37■□□□□ 0.53
CAPN1-212ENST00000527887 HCLS1P14317 486 aaPredicted RBP18.36■□□□□ 0.53
CAPN1-212ENST00000527887 EIF6P56537 245 aaKnown RBP18.36■□□□□ 0.53
CAPN1-212ENST00000527887 LDHDQ86WU2 507 aa18.36■□□□□ 0.53
CAPN1-212ENST00000527887 SP8Q8IXZ3 490 aa18.36■□□□□ 0.53
CAPN1-212ENST00000527887 ABCC4O15439 1325 aa18.35■□□□□ 0.53
CAPN1-212ENST00000527887 HSP90B1P14625 803 aaKnown RBP18.35■□□□□ 0.53
CAPN1-212ENST00000527887 GOLGA2Q08379 1002 aa18.35■□□□□ 0.53
CAPN1-212ENST00000527887 PNMA8AQ86V59 439 aaPredicted RBP18.35■□□□□ 0.53
CAPN1-212ENST00000527887 LARGE2Q8N3Y3 721 aa18.35■□□□□ 0.53
CAPN1-212ENST00000527887 JMYQ8N9B5 988 aa18.35■□□□□ 0.53
CAPN1-212ENST00000527887 HACL1Q9UJ83 578 aa18.35■□□□□ 0.53
CAPN1-212ENST00000527887 ZNF541Q9H0D2 1346 aa18.34■□□□□ 0.53
CAPN1-212ENST00000527887 ANP32CO43423 234 aa18.34■□□□□ 0.53
CAPN1-212ENST00000527887 GRAPQ13588 217 aa18.34■□□□□ 0.53
CAPN1-212ENST00000527887 CCDC30Q5VVM6 783 aa18.34■□□□□ 0.53
CAPN1-212ENST00000527887 RIC3Q7Z5B4 369 aa18.34■□□□□ 0.53
CAPN1-212ENST00000527887 GRAPLQ8TC17 118 aaPredicted RBP18.34■□□□□ 0.53
CAPN1-212ENST00000527887 RTFDC1Q9BY42 306 aaPredicted RBP18.34■□□□□ 0.53
CAPN1-212ENST00000527887 CACNA1SQ13698 1873 aa18.34■□□□□ 0.53
CAPN1-212ENST00000527887 SF3B3Q15393 1217 aaKnown RBP18.33■□□□□ 0.52
CAPN1-212ENST00000527887 TCERG1O14776 1098 aaKnown RBP18.32■□□□□ 0.52
CAPN1-212ENST00000527887 DDX58O95786 925 aaKnown RBP18.32■□□□□ 0.52
CAPN1-212ENST00000527887 EPHX2P34913 555 aa18.32■□□□□ 0.52
CAPN1-212ENST00000527887 HTRA3P83110 453 aa18.32■□□□□ 0.52
CAPN1-212ENST00000527887 NIM1KQ8IY84 436 aa18.32■□□□□ 0.52
CAPN1-212ENST00000527887 IL16Q14005 1332 aa18.31■□□□□ 0.52
CAPN1-212ENST00000527887 ATP5J2-PTCD1G3V325 749 aa18.31■□□□□ 0.52
CAPN1-212ENST00000527887 ELL2O00472 640 aaPredicted RBP18.31■□□□□ 0.52
CAPN1-212ENST00000527887 PPIP5K2O43314 1243 aa18.31■□□□□ 0.52
CAPN1-212ENST00000527887 DPP8Q6V1X1 898 aaPredicted RBP18.31■□□□□ 0.52
CAPN1-212ENST00000527887 MPNDQ8N594 471 aa18.31■□□□□ 0.52
CAPN1-212ENST00000527887 C8orf58Q8NAV2 365 aa18.31■□□□□ 0.52
CAPN1-212ENST00000527887 FAM89AQ96GI7 184 aa18.31■□□□□ 0.52
CAPN1-212ENST00000527887 CREBZFQ9NS37 354 aa18.31■□□□□ 0.52
CAPN1-212ENST00000527887 LMOD1P29536 600 aaPredicted RBP18.3■□□□□ 0.52
CAPN1-212ENST00000527887 CCDC184Q52MB2 194 aa18.3■□□□□ 0.52
CAPN1-212ENST00000527887 WWC1Q8IX03 1113 aa18.3■□□□□ 0.52
CAPN1-212ENST00000527887 ZBTB38Q8NAP3 1195 aaPredicted RBP18.3■□□□□ 0.52
CAPN1-212ENST00000527887 CCDC191Q8NCU4 936 aa18.3■□□□□ 0.52
CAPN1-212ENST00000527887 SCN4AP35499 1836 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms