RNA–Protein interactions for RNA: ENST00000527698.1

LRRK1-206, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-206ENST00000527698 BRIP1Q9BX63 1249 aa29.6■■■□□ 2.33
LRRK1-206ENST00000527698 MAP3K2Q9Y2U5 619 aa29.6■■■□□ 2.33
LRRK1-206ENST00000527698 PTPRCP08575 1304 aa29.6■■■□□ 2.33
LRRK1-206ENST00000527698 KIF3CO14782 793 aa29.59■■■□□ 2.33
LRRK1-206ENST00000527698 GPTP24298 496 aa29.59■■■□□ 2.33
LRRK1-206ENST00000527698 MRPL50Q8N5N7 158 aaKnown RBP29.59■■■□□ 2.33
LRRK1-206ENST00000527698 ISCA1Q9BUE6 129 aa29.59■■■□□ 2.33
LRRK1-206ENST00000527698 PDE6BP35913 854 aa29.58■■■□□ 2.33
LRRK1-206ENST00000527698 PRR5LQ6MZQ0 368 aa29.58■■■□□ 2.33
LRRK1-206ENST00000527698 UTP14AQ9BVJ6 771 aaKnown RBP29.58■■■□□ 2.33
LRRK1-206ENST00000527698 SMC4Q9NTJ3 1288 aa29.58■■■□□ 2.33
LRRK1-206ENST00000527698 DPEP1P16444 411 aa29.57■■■□□ 2.32
LRRK1-206ENST00000527698 NLRP10Q86W26 655 aa29.57■■■□□ 2.32
LRRK1-206ENST00000527698 CCDC191Q8NCU4 936 aa29.57■■■□□ 2.32
LRRK1-206ENST00000527698 UBN2Q6ZU65 1347 aa29.56■■■□□ 2.32
LRRK1-206ENST00000527698 HSP90B1P14625 803 aaKnown RBP29.56■■■□□ 2.32
LRRK1-206ENST00000527698 RARSP54136 660 aaKnown RBP29.56■■■□□ 2.32
LRRK1-206ENST00000527698 DNAAF4Q8WXU2 420 aa29.56■■■□□ 2.32
LRRK1-206ENST00000527698 SUSD4Q5VX71 490 aa29.55■■■□□ 2.32
LRRK1-206ENST00000527698 MYD88Q99836 296 aa29.54■■■□□ 2.32
LRRK1-206ENST00000527698 KIF16BQ96L93 1317 aa29.53■■■□□ 2.32
LRRK1-206ENST00000527698 KCNA3P22001 575 aa29.53■■■□□ 2.32
LRRK1-206ENST00000527698 ARHGAP27Q6ZUM4 889 aa29.53■■■□□ 2.32
LRRK1-206ENST00000527698 TRMT112Q9UI30 125 aaKnown RBP29.53■■■□□ 2.32
LRRK1-206ENST00000527698 RIC1Q4ADV7 1423 aa29.53■■■□□ 2.32
LRRK1-206ENST00000527698 NTSR2O95665 410 aa29.52■■■□□ 2.32
LRRK1-206ENST00000527698 CWC25Q9NXE8 425 aaPredicted RBP29.52■■■□□ 2.32
LRRK1-206ENST00000527698 FAM177BA6PVY3 158 aa29.51■■■□□ 2.31
LRRK1-206ENST00000527698 ATP5J2-PTCD1G3V325 749 aa29.51■■■□□ 2.31
LRRK1-206ENST00000527698 H0YIN7 160 aa29.51■■■□□ 2.31
LRRK1-206ENST00000527698 IPO8O15397 1037 aaKnown RBP29.51■■■□□ 2.31
LRRK1-206ENST00000527698 LINS1Q8NG48 757 aa29.51■■■□□ 2.31
LRRK1-206ENST00000527698 ARHGAP45Q92619 1136 aa29.51■■■□□ 2.31
LRRK1-206ENST00000527698 SH3TC1Q8TE82 1336 aa29.5■■■□□ 2.31
LRRK1-206ENST00000527698 SLC10A5Q5PT55 438 aa29.5■■■□□ 2.31
LRRK1-206ENST00000527698 PIM2Q9P1W9 311 aa29.5■■■□□ 2.31
LRRK1-206ENST00000527698 IFFO2Q5TF58 517 aa29.49■■■□□ 2.31
LRRK1-206ENST00000527698 ANKRD31Q8N7Z5 1873 aa29.48■■■□□ 2.31
LRRK1-206ENST00000527698 KLRG2A4D1S0 409 aaPredicted RBP29.48■■■□□ 2.31
LRRK1-206ENST00000527698 ZBTB38Q8NAP3 1195 aaPredicted RBP29.48■■■□□ 2.31
LRRK1-206ENST00000527698 BCL2L13Q9BXK5 485 aa29.48■■■□□ 2.31
LRRK1-206ENST00000527698 TOMM70O94826 608 aa29.47■■■□□ 2.31
LRRK1-206ENST00000527698 ERFEQ4G0M1 354 aa29.47■■■□□ 2.31
LRRK1-206ENST00000527698 YTHDC1Q96MU7 727 aaKnown RBP29.47■■■□□ 2.31
LRRK1-206ENST00000527698 API5Q9BZZ5 524 aaKnown RBP29.47■■■□□ 2.31
LRRK1-206ENST00000527698 DLEC1Q9Y238 1755 aa29.45■■■□□ 2.31
LRRK1-206ENST00000527698 NEURL1BA8MQ27 555 aa29.45■■■□□ 2.31
LRRK1-206ENST00000527698 PCCAP05165 728 aaPredicted RBP29.45■■■□□ 2.31
LRRK1-206ENST00000527698 IGKV5-2P06315 115 aa29.45■■■□□ 2.31
LRRK1-206ENST00000527698 DALRD3Q5D0E6 543 aaKnown RBP29.45■■■□□ 2.31
LRRK1-206ENST00000527698 NUTM1Q86Y26 1132 aa29.45■■■□□ 2.31
LRRK1-206ENST00000527698 C2CD5Q86YS7 1000 aa29.45■■■□□ 2.31
LRRK1-206ENST00000527698 NLRP3Q96P20 1036 aa29.45■■■□□ 2.31
LRRK1-206ENST00000527698 ALDH1L1O75891 902 aa29.44■■■□□ 2.3
LRRK1-206ENST00000527698 NOB1Q9ULX3 412 aaKnown RBP29.44■■■□□ 2.3
LRRK1-206ENST00000527698 F6X3S4 739 aa29.43■■■□□ 2.3
LRRK1-206ENST00000527698 APLP1P51693 650 aa29.43■■■□□ 2.3
LRRK1-206ENST00000527698 BEND3Q5T5X7 828 aa29.43■■■□□ 2.3
LRRK1-206ENST00000527698 MASTLQ96GX5 879 aa29.43■■■□□ 2.3
LRRK1-206ENST00000527698 SRCIN1Q9C0H9 1055 aa29.43■■■□□ 2.3
LRRK1-206ENST00000527698 GCKRQ14397 625 aa29.42■■■□□ 2.3
LRRK1-206ENST00000527698 STYK1Q6J9G0 422 aa29.42■■■□□ 2.3
LRRK1-206ENST00000527698 SLC4A10Q6U841 1118 aa29.42■■■□□ 2.3
LRRK1-206ENST00000527698 SBF1O95248 1867 aa29.42■■■□□ 2.3
LRRK1-206ENST00000527698 SRGNP10124 158 aa29.41■■■□□ 2.3
LRRK1-206ENST00000527698 NPR1P16066 1061 aa29.41■■■□□ 2.3
LRRK1-206ENST00000527698 CRY2Q49AN0 593 aa29.41■■■□□ 2.3
LRRK1-206ENST00000527698 C9orf131Q5VYM1 1079 aa29.41■■■□□ 2.3
LRRK1-206ENST00000527698 CCDC24Q8N4L8 307 aa29.41■■■□□ 2.3
LRRK1-206ENST00000527698 FAM89AQ96GI7 184 aa29.41■■■□□ 2.3
LRRK1-206ENST00000527698 ALDH1B1P30837 517 aa29.4■■■□□ 2.3
LRRK1-206ENST00000527698 CWF19L2Q2TBE0 894 aaKnown RBP29.4■■■□□ 2.3
LRRK1-206ENST00000527698 CNKSR1Q969H4 720 aa29.4■■■□□ 2.3
LRRK1-206ENST00000527698 CDHR2Q9BYE9 1310 aa29.4■■■□□ 2.3
LRRK1-206ENST00000527698 CHRNA5P30532 468 aa29.39■■■□□ 2.3
LRRK1-206ENST00000527698 NMRK2Q9NPI5 230 aa29.39■■■□□ 2.3
LRRK1-206ENST00000527698 LAMB2P55268 1798 aa29.39■■■□□ 2.29
LRRK1-206ENST00000527698 ABCC12Q96J65 1359 aa29.39■■■□□ 2.29
LRRK1-206ENST00000527698 IRS4O14654 1257 aaPredicted RBP29.38■■■□□ 2.29
LRRK1-206ENST00000527698 BCAR3O75815 825 aa29.38■■■□□ 2.29
LRRK1-206ENST00000527698 CCT4P50991 539 aaKnown RBP29.38■■■□□ 2.29
LRRK1-206ENST00000527698 TTLL6Q8N841 843 aa29.38■■■□□ 2.29
LRRK1-206ENST00000527698 RPGRQ92834 1020 aaKnown RBP29.38■■■□□ 2.29
LRRK1-206ENST00000527698 H7C1W4 665 aa29.37■■■□□ 2.29
LRRK1-206ENST00000527698 HOXA10P31260 410 aaPredicted RBP29.36■■■□□ 2.29
LRRK1-206ENST00000527698 ZKSCAN2Q63HK3 967 aa29.36■■■□□ 2.29
LRRK1-206ENST00000527698 ATF7IPQ6VMQ6 1270 aa29.36■■■□□ 2.29
LRRK1-206ENST00000527698 ZNF622Q969S3 477 aaKnown RBP eCLIP29.36■■■□□ 2.29
LRRK1-206ENST00000527698 RBM17Q96I25 401 aaKnown RBP29.36■■■□□ 2.29
LRRK1-206ENST00000527698 RCAN3Q9UKA8 241 aa29.36■■■□□ 2.29
LRRK1-206ENST00000527698 DDX60Q8IY21 1712 aaKnown RBP29.36■■■□□ 2.29
LRRK1-206ENST00000527698 TNRC6CQ9HCJ0 1690 aaKnown RBP29.35■■■□□ 2.29
LRRK1-206ENST00000527698 HCLS1P14317 486 aaPredicted RBP29.35■■■□□ 2.29
LRRK1-206ENST00000527698 RBM46Q8TBY0 533 aaKnown RBP29.35■■■□□ 2.29
LRRK1-206ENST00000527698 FRAT1Q92837 279 aaPredicted RBP29.35■■■□□ 2.29
LRRK1-206ENST00000527698 C9orf78Q9NZ63 289 aaPredicted RBP29.35■■■□□ 2.29
LRRK1-206ENST00000527698 PDE8AO60658 829 aa29.34■■■□□ 2.29
LRRK1-206ENST00000527698 SF3B3Q15393 1217 aaKnown RBP29.34■■■□□ 2.29
LRRK1-206ENST00000527698 KDM2BQ8NHM5 1336 aa29.34■■■□□ 2.29
LRRK1-206ENST00000527698 COL11A2P13942 1736 aaPredicted RBP29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms