RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 FHOD1Q9Y613 1164 aa8.78□□□□□ -1
SOX6-208ENST00000527619 PTPRCP08575 1304 aa8.78□□□□□ -1
SOX6-208ENST00000527619 RAD50Q92878 1312 aa8.78□□□□□ -1
SOX6-208ENST00000527619 HECW2Q9P2P5 1572 aa8.78□□□□□ -1
SOX6-208ENST00000527619 SETBP1Q9Y6X0 1596 aa8.78□□□□□ -1
SOX6-208ENST00000527619 SSH2Q76I76 1423 aa8.78□□□□□ -1
SOX6-208ENST00000527619 STX6O43752 255 aa8.78□□□□□ -1
SOX6-208ENST00000527619 RBM5P52756 815 aaKnown RBP eCLIP8.78□□□□□ -1
SOX6-208ENST00000527619 TPM4P67936 248 aa8.78□□□□□ -1
SOX6-208ENST00000527619 TYRO3Q06418 890 aa8.78□□□□□ -1
SOX6-208ENST00000527619 MAP3K11Q16584 847 aa8.78□□□□□ -1
SOX6-208ENST00000527619 NYAP1Q6ZVC0 841 aa8.78□□□□□ -1
SOX6-208ENST00000527619 LUZP1Q86V48 1076 aa8.78□□□□□ -1
SOX6-208ENST00000527619 RPAP2Q8IXW5 612 aaPredicted RBP8.78□□□□□ -1
SOX6-208ENST00000527619 CACTINQ8WUQ7 758 aaKnown RBP8.78□□□□□ -1
SOX6-208ENST00000527619 TRIM5Q9C035 493 aa8.78□□□□□ -1
SOX6-208ENST00000527619 KDM4CQ9H3R0 1056 aa8.78□□□□□ -1
SOX6-208ENST00000527619 OSBPL3Q9H4L5 887 aa8.78□□□□□ -1
SOX6-208ENST00000527619 ANAPC4Q9UJX5 808 aa8.78□□□□□ -1
SOX6-208ENST00000527619 ARHGEF40Q8TER5 1519 aa8.78□□□□□ -1
SOX6-208ENST00000527619 ADGRF5Q8IZF2 1346 aa8.78□□□□□ -1
SOX6-208ENST00000527619 NEMFO60524 1076 aa8.77□□□□□ -1
SOX6-208ENST00000527619 CDC25BP30305 580 aa8.77□□□□□ -1
SOX6-208ENST00000527619 ZRSR2Q15696 482 aaKnown RBP8.77□□□□□ -1
SOX6-208ENST00000527619 SYT10Q6XYQ8 523 aa8.77□□□□□ -1
SOX6-208ENST00000527619 ZNF662Q6ZS27 426 aa8.77□□□□□ -1
SOX6-208ENST00000527619 RPAINQ86UA6 219 aa8.77□□□□□ -1
SOX6-208ENST00000527619 SUDS3Q9H7L9 328 aaPredicted RBP8.77□□□□□ -1
SOX6-208ENST00000527619 CBX8Q9HC52 389 aa8.77□□□□□ -1
SOX6-208ENST00000527619 CLIP2Q9UDT6 1046 aa8.77□□□□□ -1
SOX6-208ENST00000527619 PAX7P23759 505 aa8.77□□□□□ -1.01
SOX6-208ENST00000527619 CASQ1P31415 396 aa8.77□□□□□ -1.01
SOX6-208ENST00000527619 PLA2G4AP47712 749 aa8.77□□□□□ -1.01
SOX6-208ENST00000527619 TRDNQ13061 729 aa8.77□□□□□ -1.01
SOX6-208ENST00000527619 KRBA2Q6ZNG9 492 aa8.77□□□□□ -1.01
SOX6-208ENST00000527619 NEK11Q8NG66 645 aa8.77□□□□□ -1.01
SOX6-208ENST00000527619 SMC3Q9UQE7 1217 aa8.77□□□□□ -1.01
SOX6-208ENST00000527619 ATP7AQ04656 1500 aa8.77□□□□□ -1.01
SOX6-208ENST00000527619 TET3O43151 1660 aa8.77□□□□□ -1.01
SOX6-208ENST00000527619 PNMA6AP0CW24 399 aaPredicted RBP8.77□□□□□ -1.01
SOX6-208ENST00000527619 SYT1P21579 422 aa8.77□□□□□ -1.01
SOX6-208ENST00000527619 CEP85Q6P2H3 762 aa8.77□□□□□ -1.01
SOX6-208ENST00000527619 TSPYL6Q8N831 410 aa8.77□□□□□ -1.01
SOX6-208ENST00000527619 NFATC2IPQ8NCF5 419 aa8.77□□□□□ -1.01
SOX6-208ENST00000527619 TDRD7Q8NHU6 1098 aaKnown RBP8.77□□□□□ -1.01
SOX6-208ENST00000527619 UPF3BQ9BZI7 483 aaKnown RBP8.77□□□□□ -1.01
SOX6-208ENST00000527619 CWC15Q9P013 229 aaKnown RBP8.77□□□□□ -1.01
SOX6-208ENST00000527619 POLKQ9UBT6 870 aa8.77□□□□□ -1.01
SOX6-208ENST00000527619 KIDINS220Q9ULH0 1771 aa8.76□□□□□ -1.01
SOX6-208ENST00000527619 TUBGCP6Q96RT7 1819 aa8.76□□□□□ -1.01
SOX6-208ENST00000527619 NRXN1Q9ULB1 1477 aa8.76□□□□□ -1.01
SOX6-208ENST00000527619 KIF2AO00139 706 aaPredicted RBP8.76□□□□□ -1.01
SOX6-208ENST00000527619 MYO1CO00159 1063 aa8.76□□□□□ -1.01
SOX6-208ENST00000527619 CLCN6P51797 869 aa8.76□□□□□ -1.01
SOX6-208ENST00000527619 LRRC8AQ8IWT6 810 aa8.76□□□□□ -1.01
SOX6-208ENST00000527619 PROCA1Q8NCQ7 364 aaPredicted RBP8.76□□□□□ -1.01
SOX6-208ENST00000527619 DRC1Q96MC2 740 aa8.76□□□□□ -1.01
SOX6-208ENST00000527619 NUP62CLQ9H1M0 184 aa8.76□□□□□ -1.01
SOX6-208ENST00000527619 ANO2Q9NQ90 1003 aa8.76□□□□□ -1.01
SOX6-208ENST00000527619 JRKLQ9Y4A0 524 aa8.76□□□□□ -1.01
SOX6-208ENST00000527619 USP27XA6NNY8 438 aa8.76□□□□□ -1.01
SOX6-208ENST00000527619 PDE1AP54750 535 aa8.76□□□□□ -1.01
SOX6-208ENST00000527619 GPS2Q13227 327 aa8.76□□□□□ -1.01
SOX6-208ENST00000527619 CCDC144BQ3MJ40 725 aa8.76□□□□□ -1.01
SOX6-208ENST00000527619 ANO6Q4KMQ2 910 aa8.76□□□□□ -1.01
SOX6-208ENST00000527619 RBM26Q5T8P6 1007 aaKnown RBP8.76□□□□□ -1.01
SOX6-208ENST00000527619 CCDC144CPQ8IYA2 1237 aa8.76□□□□□ -1.01
SOX6-208ENST00000527619 DEF6Q9H4E7 631 aa8.76□□□□□ -1.01
SOX6-208ENST00000527619 KIF1BO60333 1816 aa8.75□□□□□ -1.01
SOX6-208ENST00000527619 MARCH6O60337 910 aa8.75□□□□□ -1.01
SOX6-208ENST00000527619 DNM1Q05193 864 aaKnown RBP8.75□□□□□ -1.01
SOX6-208ENST00000527619 SF3A1Q15459 793 aaKnown RBP8.75□□□□□ -1.01
SOX6-208ENST00000527619 C10orf67Q8IYJ2 551 aa8.75□□□□□ -1.01
SOX6-208ENST00000527619 GOLGA6L1Q8N7Z2 621 aa8.75□□□□□ -1.01
SOX6-208ENST00000527619 LRRFIP2Q9Y608 721 aaKnown RBP8.75□□□□□ -1.01
SOX6-208ENST00000527619 DIP2CQ9Y2E4 1556 aa8.75□□□□□ -1.01
SOX6-208ENST00000527619 LRRC7Q96NW7 1537 aa8.75□□□□□ -1.01
SOX6-208ENST00000527619 ATP6V1AP38606 617 aa8.75□□□□□ -1.01
SOX6-208ENST00000527619 GSCP56915 257 aaPredicted RBP8.75□□□□□ -1.01
SOX6-208ENST00000527619 GNAI1P63096 354 aa8.75□□□□□ -1.01
SOX6-208ENST00000527619 TWISTNBQ3B726 338 aaPredicted RBP8.75□□□□□ -1.01
SOX6-208ENST00000527619 SDR16C5Q8N3Y7 309 aa8.75□□□□□ -1.01
SOX6-208ENST00000527619 CCDC191Q8NCU4 936 aa8.75□□□□□ -1.01
SOX6-208ENST00000527619 ANKRD26Q9UPS8 1709 aa8.74□□□□□ -1.01
SOX6-208ENST00000527619 ELP1O95163 1332 aa8.74□□□□□ -1.01
SOX6-208ENST00000527619 SEMA3EO15041 775 aa8.74□□□□□ -1.01
SOX6-208ENST00000527619 NPHP1O15259 732 aa8.74□□□□□ -1.01
SOX6-208ENST00000527619 DIAPH1O60610 1272 aaKnown RBP8.74□□□□□ -1.01
SOX6-208ENST00000527619 FOSBP53539 338 aa8.74□□□□□ -1.01
SOX6-208ENST00000527619 ZSCAN26Q16670 478 aa8.74□□□□□ -1.01
SOX6-208ENST00000527619 ERCC6LQ2NKX8 1250 aa8.74□□□□□ -1.01
SOX6-208ENST00000527619 MAP9Q49MG5 647 aa8.74□□□□□ -1.01
SOX6-208ENST00000527619 GET4Q7L5D6 327 aaPredicted RBP8.74□□□□□ -1.01
SOX6-208ENST00000527619 KCND1Q9NSA2 647 aa8.74□□□□□ -1.01
SOX6-208ENST00000527619 ARGLU1Q9NWB6 273 aaPredicted RBP8.74□□□□□ -1.01
SOX6-208ENST00000527619 CDC42BPGQ6DT37 1551 aa8.74□□□□□ -1.01
SOX6-208ENST00000527619 AATKQ6ZMQ8 1374 aa8.74□□□□□ -1.01
SOX6-208ENST00000527619 ELL2O00472 640 aaPredicted RBP8.74□□□□□ -1.01
SOX6-208ENST00000527619 TRIM66O15016 1216 aa8.74□□□□□ -1.01
SOX6-208ENST00000527619 KIF3BO15066 747 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms