RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 SOGA3Q5TF21 947 aa21.72■■□□□ 1.07
NR1H3-229ENST00000527464 ZNF521Q96K83 1311 aa21.72■■□□□ 1.07
NR1H3-229ENST00000527464 DDX58O95786 925 aaKnown RBP21.71■■□□□ 1.07
NR1H3-229ENST00000527464 ALDH1B1P30837 517 aa21.71■■□□□ 1.07
NR1H3-229ENST00000527464 TRIM28Q13263 835 aaKnown RBP21.71■■□□□ 1.07
NR1H3-229ENST00000527464 PRPF40BQ6NWY9 871 aaKnown RBP21.71■■□□□ 1.07
NR1H3-229ENST00000527464 RIC3Q7Z5B4 369 aa21.71■■□□□ 1.07
NR1H3-229ENST00000527464 ISCA1Q9BUE6 129 aa21.71■■□□□ 1.07
NR1H3-229ENST00000527464 PHAXQ9H814 394 aaKnown RBP21.71■■□□□ 1.07
NR1H3-229ENST00000527464 SLX4Q8IY92 1834 aa21.71■■□□□ 1.07
NR1H3-229ENST00000527464 SBF1O95248 1867 aa21.71■■□□□ 1.07
NR1H3-229ENST00000527464 DIEXFQ68CQ4 756 aaKnown RBP21.7■■□□□ 1.06
NR1H3-229ENST00000527464 NLRP3Q96P20 1036 aa21.69■■□□□ 1.06
NR1H3-229ENST00000527464 TRMT112Q9UI30 125 aaKnown RBP21.69■■□□□ 1.06
NR1H3-229ENST00000527464 TNRC6CQ9HCJ0 1690 aaKnown RBP21.69■■□□□ 1.06
NR1H3-229ENST00000527464 C21orf2O43822 256 aa21.68■■□□□ 1.06
NR1H3-229ENST00000527464 VAMP4O75379 141 aa21.68■■□□□ 1.06
NR1H3-229ENST00000527464 HOXA10P31260 410 aaPredicted RBP21.68■■□□□ 1.06
NR1H3-229ENST00000527464 EXOSC9Q06265 439 aaKnown RBP21.68■■□□□ 1.06
NR1H3-229ENST00000527464 C9orf131Q5VYM1 1079 aa21.68■■□□□ 1.06
NR1H3-229ENST00000527464 SPINK5Q9NQ38 1064 aaPredicted RBP21.68■■□□□ 1.06
NR1H3-229ENST00000527464 SH3TC1Q8TE82 1336 aa21.68■■□□□ 1.06
NR1H3-229ENST00000527464 CACNA1SQ13698 1873 aa21.68■■□□□ 1.06
NR1H3-229ENST00000527464 FER1L6Q2WGJ9 1857 aa21.67■■□□□ 1.06
NR1H3-229ENST00000527464 C7orf43Q8WVR3 580 aa21.67■■□□□ 1.06
NR1H3-229ENST00000527464 RPGRQ92834 1020 aaKnown RBP21.67■■□□□ 1.06
NR1H3-229ENST00000527464 LTBP3Q9NS15 1303 aa21.66■■□□□ 1.06
NR1H3-229ENST00000527464 SLC4A2P04920 1241 aa21.66■■□□□ 1.06
NR1H3-229ENST00000527464 LMNB1P20700 586 aa21.66■■□□□ 1.06
NR1H3-229ENST00000527464 CRAMP1Q96RY5 1269 aa21.66■■□□□ 1.06
NR1H3-229ENST00000527464 RNF181Q9P0P0 153 aa21.66■■□□□ 1.06
NR1H3-229ENST00000527464 ZC3H4Q9UPT8 1303 aaKnown RBP21.65■■□□□ 1.06
NR1H3-229ENST00000527464 ATP5J2-PTCD1G3V325 749 aa21.65■■□□□ 1.06
NR1H3-229ENST00000527464 NFKBIEO00221 500 aa21.65■■□□□ 1.06
NR1H3-229ENST00000527464 KSR2Q6VAB6 950 aa21.65■■□□□ 1.06
NR1H3-229ENST00000527464 RBM17Q96I25 401 aaKnown RBP21.65■■□□□ 1.06
NR1H3-229ENST00000527464 RASSF7Q02833 373 aa21.64■■□□□ 1.05
NR1H3-229ENST00000527464 CCDC93Q567U6 631 aa21.64■■□□□ 1.05
NR1H3-229ENST00000527464 METTL22Q9BUU2 404 aaPredicted RBP21.64■■□□□ 1.05
NR1H3-229ENST00000527464 GPBP1L1Q9HC44 474 aaPredicted RBP21.64■■□□□ 1.05
NR1H3-229ENST00000527464 ZNF219Q9P2Y4 722 aaPredicted RBP21.64■■□□□ 1.05
NR1H3-229ENST00000527464 E9PSI1 815 aa21.63■■□□□ 1.05
NR1H3-229ENST00000527464 CC2D2BQ6DHV5 1058 aa21.63■■□□□ 1.05
NR1H3-229ENST00000527464 CCDC191Q8NCU4 936 aa21.63■■□□□ 1.05
NR1H3-229ENST00000527464 TAOK3Q9H2K8 898 aa21.63■■□□□ 1.05
NR1H3-229ENST00000527464 CCDC88AQ3V6T2 1871 aa21.62■■□□□ 1.05
NR1H3-229ENST00000527464 PI4KAP2A4QPH2 592 aa21.62■■□□□ 1.05
NR1H3-229ENST00000527464 TCERG1O14776 1098 aaKnown RBP21.62■■□□□ 1.05
NR1H3-229ENST00000527464 HSP90B1P14625 803 aaKnown RBP21.62■■□□□ 1.05
NR1H3-229ENST00000527464 GRIPAP1Q4V328 841 aa21.62■■□□□ 1.05
NR1H3-229ENST00000527464 RTKN2Q8IZC4 609 aa21.62■■□□□ 1.05
NR1H3-229ENST00000527464 PI4KAP1Q8N8J0 262 aa21.62■■□□□ 1.05
NR1H3-229ENST00000527464 MYD88Q99836 296 aa21.62■■□□□ 1.05
NR1H3-229ENST00000527464 MAP3K2Q9Y2U5 619 aa21.62■■□□□ 1.05
NR1H3-229ENST00000527464 HCLS1P14317 486 aaPredicted RBP21.61■■□□□ 1.05
NR1H3-229ENST00000527464 C3orf67Q6ZVT6 689 aa21.61■■□□□ 1.05
NR1H3-229ENST00000527464 NEXNQ0ZGT2 675 aa21.6■■□□□ 1.05
NR1H3-229ENST00000527464 FLIIQ13045 1269 aa21.6■■□□□ 1.05
NR1H3-229ENST00000527464 G2E3Q7L622 706 aa21.6■■□□□ 1.05
NR1H3-229ENST00000527464 MIER1Q8N108 512 aa21.6■■□□□ 1.05
NR1H3-229ENST00000527464 SYNE4Q8N205 404 aa21.6■■□□□ 1.05
NR1H3-229ENST00000527464 ZBTB38Q8NAP3 1195 aaPredicted RBP21.6■■□□□ 1.05
NR1H3-229ENST00000527464 FAM89AQ96GI7 184 aa21.6■■□□□ 1.05
NR1H3-229ENST00000527464 CWC25Q9NXE8 425 aaPredicted RBP21.6■■□□□ 1.05
NR1H3-229ENST00000527464 DICER1Q9UPY3 1922 aaKnown RBP21.6■■□□□ 1.05
NR1H3-229ENST00000527464 LAMB2P55268 1798 aa21.59■■□□□ 1.05
NR1H3-229ENST00000527464 PRELPP51888 382 aa21.59■■□□□ 1.05
NR1H3-229ENST00000527464 PCCAP05165 728 aaPredicted RBP21.58■■□□□ 1.05
NR1H3-229ENST00000527464 FKBP4Q02790 459 aaKnown RBP eCLIP21.58■■□□□ 1.05
NR1H3-229ENST00000527464 SLFN5Q08AF3 891 aa21.58■■□□□ 1.05
NR1H3-229ENST00000527464 DDX60Q8IY21 1712 aaKnown RBP21.58■■□□□ 1.04
NR1H3-229ENST00000527464 IRS4O14654 1257 aaPredicted RBP21.57■■□□□ 1.04
NR1H3-229ENST00000527464 BBOX1O75936 387 aa21.57■■□□□ 1.04
NR1H3-229ENST00000527464 FKBP5Q13451 457 aaPredicted RBP21.57■■□□□ 1.04
NR1H3-229ENST00000527464 SF3B3Q15393 1217 aaKnown RBP21.57■■□□□ 1.04
NR1H3-229ENST00000527464 DDX46Q7L014 1031 aaKnown RBP21.57■■□□□ 1.04
NR1H3-229ENST00000527464 ZNF526Q8TF50 670 aaPredicted RBP21.57■■□□□ 1.04
NR1H3-229ENST00000527464 KDM2BQ8NHM5 1336 aa21.56■■□□□ 1.04
NR1H3-229ENST00000527464 PPEF1O14829 653 aaPredicted RBP21.56■■□□□ 1.04
NR1H3-229ENST00000527464 PSMD1Q99460 953 aa21.56■■□□□ 1.04
NR1H3-229ENST00000527464 TMX4Q9H1E5 349 aaPredicted RBP21.56■■□□□ 1.04
NR1H3-229ENST00000527464 ABCC4O15439 1325 aa21.55■■□□□ 1.04
NR1H3-229ENST00000527464 IGKV5-2P06315 115 aa21.55■■□□□ 1.04
NR1H3-229ENST00000527464 TMC4Q7Z404 712 aa21.55■■□□□ 1.04
NR1H3-229ENST00000527464 DNAAF4Q8WXU2 420 aa21.55■■□□□ 1.04
NR1H3-229ENST00000527464 ZNF428Q96B54 188 aa21.55■■□□□ 1.04
NR1H3-229ENST00000527464 SNED1Q8TER0 1413 aa21.55■■□□□ 1.04
NR1H3-229ENST00000527464 GRAPQ13588 217 aa21.54■■□□□ 1.04
NR1H3-229ENST00000527464 GRAPLQ8TC17 118 aaPredicted RBP21.54■■□□□ 1.04
NR1H3-229ENST00000527464 ATP6V0A2Q9Y487 856 aa21.54■■□□□ 1.04
NR1H3-229ENST00000527464 CDHR2Q9BYE9 1310 aa21.54■■□□□ 1.04
NR1H3-229ENST00000527464 TIAM2Q8IVF5 1701 aa21.53■■□□□ 1.04
NR1H3-229ENST00000527464 NEURL1BA8MQ27 555 aa21.53■■□□□ 1.04
NR1H3-229ENST00000527464 RTL5Q5HYW3 569 aaPredicted RBP21.53■■□□□ 1.04
NR1H3-229ENST00000527464 OLFM4Q6UX06 510 aa21.53■■□□□ 1.04
NR1H3-229ENST00000527464 TRMT2AQ8IZ69 625 aaKnown RBP21.53■■□□□ 1.04
NR1H3-229ENST00000527464 GLTPD2A6NH11 291 aa21.52■■□□□ 1.04
NR1H3-229ENST00000527464 PDE8AO60658 829 aa21.52■■□□□ 1.04
NR1H3-229ENST00000527464 SP8Q8IXZ3 490 aa21.52■■□□□ 1.04
NR1H3-229ENST00000527464 LINS1Q8NG48 757 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms