RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 CLEC4GQ6UXB4 293 aa23.44■■□□□ 1.34
SMPD1-203ENST00000527275 JARID2Q92833 1246 aaPredicted RBP23.44■■□□□ 1.34
SMPD1-203ENST00000527275 ZNF652Q9Y2D9 606 aa23.44■■□□□ 1.34
SMPD1-203ENST00000527275 UTYO14607 1347 aa23.44■■□□□ 1.34
SMPD1-203ENST00000527275 ZNF34Q8IZ26 560 aa23.44■■□□□ 1.34
SMPD1-203ENST00000527275 BCL2L12Q9HB09 334 aa23.44■■□□□ 1.34
SMPD1-203ENST00000527275 LRRFIP2Q9Y608 721 aaKnown RBP23.44■■□□□ 1.34
SMPD1-203ENST00000527275 USP42Q9H9J4 1324 aaKnown RBP23.43■■□□□ 1.34
SMPD1-203ENST00000527275 NLRP10Q86W26 655 aa23.43■■□□□ 1.34
SMPD1-203ENST00000527275 C4AP0C0L4 1744 aa23.43■■□□□ 1.34
SMPD1-203ENST00000527275 FAM161AQ3B820 660 aa23.42■■□□□ 1.34
SMPD1-203ENST00000527275 RTL5Q5HYW3 569 aaPredicted RBP23.42■■□□□ 1.34
SMPD1-203ENST00000527275 UBE3BQ7Z3V4 1068 aa23.42■■□□□ 1.34
SMPD1-203ENST00000527275 BCORQ6W2J9 1755 aa23.42■■□□□ 1.34
SMPD1-203ENST00000527275 UBN2Q6ZU65 1347 aa23.42■■□□□ 1.34
SMPD1-203ENST00000527275 ANKRD36CQ5JPF3 1778 aa23.42■■□□□ 1.34
SMPD1-203ENST00000527275 SMC5Q8IY18 1101 aa23.41■■□□□ 1.34
SMPD1-203ENST00000527275 ANO8Q9HCE9 1232 aaPredicted RBP23.41■■□□□ 1.34
SMPD1-203ENST00000527275 NIP7Q9Y221 180 aaKnown RBP eCLIP23.41■■□□□ 1.34
SMPD1-203ENST00000527275 SIRT2Q8IXJ6 389 aa23.41■■□□□ 1.34
SMPD1-203ENST00000527275 H7C1W4 665 aa23.4■■□□□ 1.34
SMPD1-203ENST00000527275 RGL2O15211 777 aa23.4■■□□□ 1.34
SMPD1-203ENST00000527275 SCN7AQ01118 1682 aa23.4■■□□□ 1.34
SMPD1-203ENST00000527275 CEP85Q6P2H3 762 aa23.4■■□□□ 1.34
SMPD1-203ENST00000527275 CASP7P55210 303 aa23.39■■□□□ 1.33
SMPD1-203ENST00000527275 UPF1Q92900 1129 aaKnown RBP eCLIP23.39■■□□□ 1.33
SMPD1-203ENST00000527275 KAZALD1Q96I82 304 aa23.39■■□□□ 1.33
SMPD1-203ENST00000527275 C8orf34Q49A92 452 aa23.38■■□□□ 1.33
SMPD1-203ENST00000527275 TBC1D9BQ66K14 1250 aa23.38■■□□□ 1.33
SMPD1-203ENST00000527275 FAM89AQ96GI7 184 aa23.38■■□□□ 1.33
SMPD1-203ENST00000527275 SUCLG2Q96I99 432 aa23.38■■□□□ 1.33
SMPD1-203ENST00000527275 SLC15A2Q16348 729 aa23.38■■□□□ 1.33
SMPD1-203ENST00000527275 BICDL1Q6ZP65 573 aa23.38■■□□□ 1.33
SMPD1-203ENST00000527275 COL23A1Q86Y22 540 aaPredicted RBP23.38■■□□□ 1.33
SMPD1-203ENST00000527275 RPAP2Q8IXW5 612 aaPredicted RBP23.38■■□□□ 1.33
SMPD1-203ENST00000527275 ANKRD44Q8N8A2 993 aa23.37■■□□□ 1.33
SMPD1-203ENST00000527275 ZBTB38Q8NAP3 1195 aaPredicted RBP23.37■■□□□ 1.33
SMPD1-203ENST00000527275 TUBGCP6Q96RT7 1819 aa23.37■■□□□ 1.33
SMPD1-203ENST00000527275 FAM177BA6PVY3 158 aa23.37■■□□□ 1.33
SMPD1-203ENST00000527275 SUSD4Q5VX71 490 aa23.37■■□□□ 1.33
SMPD1-203ENST00000527275 TRMT112Q9UI30 125 aaKnown RBP23.37■■□□□ 1.33
SMPD1-203ENST00000527275 HDAC5Q9UQL6 1122 aa23.37■■□□□ 1.33
SMPD1-203ENST00000527275 SYNE4Q8N205 404 aa23.36■■□□□ 1.33
SMPD1-203ENST00000527275 STK32BQ9NY57 414 aa23.36■■□□□ 1.33
SMPD1-203ENST00000527275 PNPLA7Q6ZV29 1317 aa23.36■■□□□ 1.33
SMPD1-203ENST00000527275 PCCAP05165 728 aaPredicted RBP23.35■■□□□ 1.33
SMPD1-203ENST00000527275 GYS1P13807 737 aa23.35■■□□□ 1.33
SMPD1-203ENST00000527275 ANP32AP39687 249 aaKnown RBP23.35■■□□□ 1.33
SMPD1-203ENST00000527275 PARP10Q53GL7 1025 aa23.35■■□□□ 1.33
SMPD1-203ENST00000527275 MSH5O43196 834 aa23.35■■□□□ 1.33
SMPD1-203ENST00000527275 FLAD1Q8NFF5 587 aa23.35■■□□□ 1.33
SMPD1-203ENST00000527275 BICC1Q9H694 974 aaKnown RBP23.35■■□□□ 1.33
SMPD1-203ENST00000527275 PNMA6EA0A0J9YXQ4 647 aa23.34■■□□□ 1.33
SMPD1-203ENST00000527275 EPHA10Q5JZY3 1008 aa23.34■■□□□ 1.33
SMPD1-203ENST00000527275 SETDB2Q96T68 719 aa23.34■■□□□ 1.33
SMPD1-203ENST00000527275 ATP8B2P98198 1209 aa23.33■■□□□ 1.33
SMPD1-203ENST00000527275 GCC1Q96CN9 775 aa23.33■■□□□ 1.33
SMPD1-203ENST00000527275 UTP14AQ9BVJ6 771 aaKnown RBP23.33■■□□□ 1.33
SMPD1-203ENST00000527275 PPP1R42Q7Z4L9 355 aa23.33■■□□□ 1.32
SMPD1-203ENST00000527275 NUCB1Q02818 461 aa23.32■■□□□ 1.32
SMPD1-203ENST00000527275 NTSR2O95665 410 aa23.31■■□□□ 1.32
SMPD1-203ENST00000527275 NFIXQ14938 502 aa23.31■■□□□ 1.32
SMPD1-203ENST00000527275 ILDR2Q71H61 639 aa23.31■■□□□ 1.32
SMPD1-203ENST00000527275 SH3TC1Q8TE82 1336 aa23.31■■□□□ 1.32
SMPD1-203ENST00000527275 SRGAP3O43295 1099 aa23.31■■□□□ 1.32
SMPD1-203ENST00000527275 FOXO4P98177 505 aa23.3■■□□□ 1.32
SMPD1-203ENST00000527275 MTX1Q13505 466 aa23.3■■□□□ 1.32
SMPD1-203ENST00000527275 NUTM1Q86Y26 1132 aa23.3■■□□□ 1.32
SMPD1-203ENST00000527275 HMMRO75330 724 aa23.3■■□□□ 1.32
SMPD1-203ENST00000527275 CDHR2Q9BYE9 1310 aa23.29■■□□□ 1.32
SMPD1-203ENST00000527275 IRS4O14654 1257 aaPredicted RBP23.29■■□□□ 1.32
SMPD1-203ENST00000527275 RABL6Q3YEC7 729 aaPredicted RBP23.28■■□□□ 1.32
SMPD1-203ENST00000527275 CHD1LQ86WJ1 897 aa23.28■■□□□ 1.32
SMPD1-203ENST00000527275 SSH3Q8TE77 659 aa23.28■■□□□ 1.32
SMPD1-203ENST00000527275 LMBR1LQ6UX01 489 aa23.28■■□□□ 1.32
SMPD1-203ENST00000527275 NBPF5PQ86XG9 351 aaPredicted RBP23.27■■□□□ 1.32
SMPD1-203ENST00000527275 TM4SF1P30408 202 aa23.27■■□□□ 1.32
SMPD1-203ENST00000527275 ANKRD45Q5TZF3 282 aa23.27■■□□□ 1.32
SMPD1-203ENST00000527275 PLA2G12BQ9BX93 195 aa23.27■■□□□ 1.32
SMPD1-203ENST00000527275 PDGFDQ9GZP0 370 aaPredicted RBP23.27■■□□□ 1.32
SMPD1-203ENST00000527275 CARMIL3Q8ND23 1372 aa23.27■■□□□ 1.31
SMPD1-203ENST00000527275 HCLS1P14317 486 aaPredicted RBP23.26■■□□□ 1.31
SMPD1-203ENST00000527275 POLA2Q14181 598 aa23.26■■□□□ 1.31
SMPD1-203ENST00000527275 NLGN1Q8N2Q7 840 aa23.26■■□□□ 1.31
SMPD1-203ENST00000527275 LNPKQ9C0E8 428 aa23.26■■□□□ 1.31
SMPD1-203ENST00000527275 GTF2E1P29083 439 aaPredicted RBP23.25■■□□□ 1.31
SMPD1-203ENST00000527275 ERFEQ4G0M1 354 aa23.25■■□□□ 1.31
SMPD1-203ENST00000527275 TPTE2Q6XPS3 522 aa23.25■■□□□ 1.31
SMPD1-203ENST00000527275 NYXQ9GZU5 481 aa23.25■■□□□ 1.31
SMPD1-203ENST00000527275 DCTPP1Q9H773 170 aa23.25■■□□□ 1.31
SMPD1-203ENST00000527275 COL24A1Q17RW2 1714 aa23.25■■□□□ 1.31
SMPD1-203ENST00000527275 IPO9Q96P70 1041 aaKnown RBP23.25■■□□□ 1.31
SMPD1-203ENST00000527275 CHMP3Q9Y3E7 222 aa23.24■■□□□ 1.31
SMPD1-203ENST00000527275 PDE8AO60658 829 aa23.24■■□□□ 1.31
SMPD1-203ENST00000527275 QSER1Q2KHR3 1735 aa23.23■■□□□ 1.31
SMPD1-203ENST00000527275 DDR1Q08345 913 aa23.23■■□□□ 1.31
SMPD1-203ENST00000527275 MSL1Q68DK7 614 aa23.23■■□□□ 1.31
SMPD1-203ENST00000527275 CCDC85AQ96PX6 553 aaPredicted RBP23.23■■□□□ 1.31
SMPD1-203ENST00000527275 CCDC24Q8N4L8 307 aa23.23■■□□□ 1.31
SMPD1-203ENST00000527275 TTLL11Q8NHH1 800 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms