RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 SLC34A2O95436 690 aa17.37■□□□□ 0.37
CLNS1A-207ENST00000527133 NGEFQ8N5V2 710 aa17.37■□□□□ 0.37
CLNS1A-207ENST00000527133 CAPNS2Q96L46 248 aa17.37■□□□□ 0.37
CLNS1A-207ENST00000527133 NYXQ9GZU5 481 aa17.37■□□□□ 0.37
CLNS1A-207ENST00000527133 LTBP1Q14766 1721 aa17.37■□□□□ 0.37
CLNS1A-207ENST00000527133 EPS15P42566 896 aa17.36■□□□□ 0.37
CLNS1A-207ENST00000527133 SCNN1DP51172 638 aa17.36■□□□□ 0.37
CLNS1A-207ENST00000527133 CC2D2BQ6DHV5 1058 aa17.36■□□□□ 0.37
CLNS1A-207ENST00000527133 CYP4F22Q6NT55 531 aa17.36■□□□□ 0.37
CLNS1A-207ENST00000527133 LARGE2Q8N3Y3 721 aa17.36■□□□□ 0.37
CLNS1A-207ENST00000527133 RPGRQ92834 1020 aaKnown RBP17.36■□□□□ 0.37
CLNS1A-207ENST00000527133 BEGAINQ9BUH8 593 aa17.36■□□□□ 0.37
CLNS1A-207ENST00000527133 CCDC85CA6NKD9 419 aa17.35■□□□□ 0.37
CLNS1A-207ENST00000527133 TRAF5O00463 557 aa17.35■□□□□ 0.37
CLNS1A-207ENST00000527133 U2AF1L5P0DN76 240 aaPredicted RBP17.35■□□□□ 0.37
CLNS1A-207ENST00000527133 ECE1P42892 770 aa17.35■□□□□ 0.37
CLNS1A-207ENST00000527133 U2AF1Q01081 240 aaKnown RBP eCLIP17.35■□□□□ 0.37
CLNS1A-207ENST00000527133 SLC51AQ86UW1 340 aa17.35■□□□□ 0.37
CLNS1A-207ENST00000527133 GPR101Q96P66 508 aaPredicted RBP17.35■□□□□ 0.37
CLNS1A-207ENST00000527133 NUDCQ9Y266 331 aa17.35■□□□□ 0.37
CLNS1A-207ENST00000527133 THSD7BQ9C0I4 1608 aa17.35■□□□□ 0.37
CLNS1A-207ENST00000527133 TCERG1O14776 1098 aaKnown RBP17.34■□□□□ 0.37
CLNS1A-207ENST00000527133 MIS18AQ9NYP9 233 aa17.34■□□□□ 0.37
CLNS1A-207ENST00000527133 GPTP24298 496 aa17.33■□□□□ 0.36
CLNS1A-207ENST00000527133 TAF7Q15545 349 aaPredicted RBP17.33■□□□□ 0.36
CLNS1A-207ENST00000527133 CST9Q5W186 159 aa17.33■□□□□ 0.36
CLNS1A-207ENST00000527133 USP50Q70EL3 339 aaPredicted RBP17.33■□□□□ 0.36
CLNS1A-207ENST00000527133 TSKSQ9UJT2 592 aa17.33■□□□□ 0.36
CLNS1A-207ENST00000527133 MAP3K15Q6ZN16 1313 aa17.32■□□□□ 0.36
CLNS1A-207ENST00000527133 ERVV-1B6SEH8 477 aa17.32■□□□□ 0.36
CLNS1A-207ENST00000527133 PPEF1O14829 653 aaPredicted RBP17.32■□□□□ 0.36
CLNS1A-207ENST00000527133 HOXA10P31260 410 aaPredicted RBP17.32■□□□□ 0.36
CLNS1A-207ENST00000527133 KIF6Q6ZMV9 814 aa17.32■□□□□ 0.36
CLNS1A-207ENST00000527133 NIM1KQ8IY84 436 aa17.32■□□□□ 0.36
CLNS1A-207ENST00000527133 LAMB4A4D0S4 1761 aa17.32■□□□□ 0.36
CLNS1A-207ENST00000527133 UBN2Q6ZU65 1347 aa17.31■□□□□ 0.36
CLNS1A-207ENST00000527133 HTATSF1O43719 755 aaKnown RBP17.31■□□□□ 0.36
CLNS1A-207ENST00000527133 AOC2O75106 756 aa17.31■□□□□ 0.36
CLNS1A-207ENST00000527133 GRIPAP1Q4V328 841 aa17.31■□□□□ 0.36
CLNS1A-207ENST00000527133 TTLL7Q6ZT98 887 aa17.31■□□□□ 0.36
CLNS1A-207ENST00000527133 RBM17Q96I25 401 aaKnown RBP17.31■□□□□ 0.36
CLNS1A-207ENST00000527133 RRP7AQ9Y3A4 280 aaKnown RBP17.31■□□□□ 0.36
CLNS1A-207ENST00000527133 TLL2Q9Y6L7 1015 aa17.31■□□□□ 0.36
CLNS1A-207ENST00000527133 RIC1Q4ADV7 1423 aa17.3■□□□□ 0.36
CLNS1A-207ENST00000527133 PPIP5K2O43314 1243 aa17.3■□□□□ 0.36
CLNS1A-207ENST00000527133 MLLT1Q03111 559 aaPredicted RBP17.3■□□□□ 0.36
CLNS1A-207ENST00000527133 SUSD4Q5VX71 490 aa17.3■□□□□ 0.36
CLNS1A-207ENST00000527133 CRAMP1Q96RY5 1269 aa17.3■□□□□ 0.36
CLNS1A-207ENST00000527133 ZBTB3Q9H5J0 574 aa17.3■□□□□ 0.36
CLNS1A-207ENST00000527133 TRPM7Q96QT4 1865 aa17.3■□□□□ 0.36
CLNS1A-207ENST00000527133 NUP98P52948 1817 aa17.3■□□□□ 0.36
CLNS1A-207ENST00000527133 IBTKQ9P2D0 1353 aaPredicted RBP17.29■□□□□ 0.36
CLNS1A-207ENST00000527133 MYL6BP14649 208 aa17.29■□□□□ 0.36
CLNS1A-207ENST00000527133 AOC3Q16853 763 aa17.29■□□□□ 0.36
CLNS1A-207ENST00000527133 C3orf67Q6ZVT6 689 aa17.29■□□□□ 0.36
CLNS1A-207ENST00000527133 ADARB2Q9NS39 739 aaKnown RBP17.29■□□□□ 0.36
CLNS1A-207ENST00000527133 MAP2K2P36507 400 aa17.28■□□□□ 0.36
CLNS1A-207ENST00000527133 GPRC5DQ9NZD1 345 aa17.28■□□□□ 0.36
CLNS1A-207ENST00000527133 CELF2O95319 508 aaKnown RBP17.27■□□□□ 0.36
CLNS1A-207ENST00000527133 NTSR2O95665 410 aa17.27■□□□□ 0.36
CLNS1A-207ENST00000527133 PPP2R1AP30153 589 aa17.27■□□□□ 0.36
CLNS1A-207ENST00000527133 TMX4Q9H1E5 349 aaPredicted RBP17.27■□□□□ 0.36
CLNS1A-207ENST00000527133 RGS19P49795 217 aa17.26■□□□□ 0.35
CLNS1A-207ENST00000527133 SAPCD2Q86UD0 394 aa17.26■□□□□ 0.35
CLNS1A-207ENST00000527133 ZNF34Q8IZ26 560 aa17.26■□□□□ 0.35
CLNS1A-207ENST00000527133 CFAP44Q96MT7 982 aa17.26■□□□□ 0.35
CLNS1A-207ENST00000527133 GLIS2Q9BZE0 524 aaPredicted RBP17.26■□□□□ 0.35
CLNS1A-207ENST00000527133 GMPSP49915 693 aaPredicted RBP17.25■□□□□ 0.35
CLNS1A-207ENST00000527133 EIF4A1P60842 406 aaKnown RBP17.25■□□□□ 0.35
CLNS1A-207ENST00000527133 CXCL9Q07325 125 aa17.25■□□□□ 0.35
CLNS1A-207ENST00000527133 PNISRQ8TF01 805 aaKnown RBP17.25■□□□□ 0.35
CLNS1A-207ENST00000527133 ZNRF3Q9ULT6 936 aa17.25■□□□□ 0.35
CLNS1A-207ENST00000527133 ATP6V0A2Q9Y487 856 aa17.25■□□□□ 0.35
CLNS1A-207ENST00000527133 KDM3BQ7LBC6 1761 aa17.25■□□□□ 0.35
CLNS1A-207ENST00000527133 CA12O43570 354 aa17.24■□□□□ 0.35
CLNS1A-207ENST00000527133 PPP1R42Q7Z4L9 355 aa17.24■□□□□ 0.35
CLNS1A-207ENST00000527133 NLRP3Q96P20 1036 aa17.24■□□□□ 0.35
CLNS1A-207ENST00000527133 MCOLN1Q9GZU1 580 aa17.24■□□□□ 0.35
CLNS1A-207ENST00000527133 ZNF408Q9H9D4 720 aa17.24■□□□□ 0.35
CLNS1A-207ENST00000527133 GIGYF2Q6Y7W6 1299 aaKnown RBP17.23■□□□□ 0.35
CLNS1A-207ENST00000527133 VPS33BQ9H267 617 aa17.23■□□□□ 0.35
CLNS1A-207ENST00000527133 ABCC4O15439 1325 aa17.22■□□□□ 0.35
CLNS1A-207ENST00000527133 TNRC18O15417 2968 aaPredicted RBP17.22■□□□□ 0.35
CLNS1A-207ENST00000527133 BRPF1P55201 1214 aaPredicted RBP17.22■□□□□ 0.35
CLNS1A-207ENST00000527133 PARP10Q53GL7 1025 aa17.22■□□□□ 0.35
CLNS1A-207ENST00000527133 DPP8Q6V1X1 898 aaPredicted RBP17.22■□□□□ 0.35
CLNS1A-207ENST00000527133 SUPT20HQ8NEM7 779 aa17.22■□□□□ 0.35
CLNS1A-207ENST00000527133 THUMPD2Q9BTF0 503 aaKnown RBP17.22■□□□□ 0.35
CLNS1A-207ENST00000527133 CASP8AP2Q9UKL3 1982 aa17.21■□□□□ 0.35
CLNS1A-207ENST00000527133 RAD17O75943 681 aa17.21■□□□□ 0.35
CLNS1A-207ENST00000527133 NEFMP07197 916 aa17.21■□□□□ 0.35
CLNS1A-207ENST00000527133 CIAPIN1Q6FI81 312 aa17.21■□□□□ 0.35
CLNS1A-207ENST00000527133 HHIPL1Q96JK4 782 aa17.21■□□□□ 0.35
CLNS1A-207ENST00000527133 UTP14AQ9BVJ6 771 aaKnown RBP17.21■□□□□ 0.35
CLNS1A-207ENST00000527133 BCL2L13Q9BXK5 485 aa17.21■□□□□ 0.35
CLNS1A-207ENST00000527133 RTFDC1Q9BY42 306 aaPredicted RBP17.21■□□□□ 0.35
CLNS1A-207ENST00000527133 DLG5Q8TDM6 1919 aa17.2■□□□□ 0.34
CLNS1A-207ENST00000527133 HIRAP54198 1017 aaPredicted RBP17.2■□□□□ 0.34
CLNS1A-207ENST00000527133 TRPM4Q8TD43 1214 aa17.2■□□□□ 0.34
CLNS1A-207ENST00000527133 PGAP2Q9UHJ9 254 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms