RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 PRPF40BQ6NWY9 871 aaKnown RBP12.96□□□□□ -0.33
PTPMT1-204ENST00000527079 COPS6Q7L5N1 327 aa12.96□□□□□ -0.33
PTPMT1-204ENST00000527079 ZSCAN30Q86W11 494 aa12.96□□□□□ -0.33
PTPMT1-204ENST00000527079 TTC5Q8N0Z6 440 aa12.96□□□□□ -0.33
PTPMT1-204ENST00000527079 JAKMIP1Q96N16 626 aaKnown RBP12.96□□□□□ -0.33
PTPMT1-204ENST00000527079 PDRG1Q9NUG6 133 aa12.96□□□□□ -0.33
PTPMT1-204ENST00000527079 STX6O43752 255 aa12.96□□□□□ -0.34
PTPMT1-204ENST00000527079 PDIA4P13667 645 aaKnown RBP12.96□□□□□ -0.34
PTPMT1-204ENST00000527079 MYL6BP14649 208 aa12.96□□□□□ -0.34
PTPMT1-204ENST00000527079 ANKRD13DQ6ZTN6 518 aa12.96□□□□□ -0.34
PTPMT1-204ENST00000527079 USP48Q86UV5 1035 aa12.96□□□□□ -0.34
PTPMT1-204ENST00000527079 MAP4K1Q92918 833 aa12.96□□□□□ -0.34
PTPMT1-204ENST00000527079 ZNF496Q96IT1 587 aaPredicted RBP12.96□□□□□ -0.34
PTPMT1-204ENST00000527079 COPRSQ9NQ92 184 aa12.96□□□□□ -0.34
PTPMT1-204ENST00000527079 SYT1P21579 422 aa12.95□□□□□ -0.34
PTPMT1-204ENST00000527079 PSMA5P28066 241 aa12.95□□□□□ -0.34
PTPMT1-204ENST00000527079 LRP10Q7Z4F1 713 aa12.95□□□□□ -0.34
PTPMT1-204ENST00000527079 KLHL34Q8N239 644 aa12.95□□□□□ -0.34
PTPMT1-204ENST00000527079 FMNL2Q96PY5 1086 aa12.95□□□□□ -0.34
PTPMT1-204ENST00000527079 MYD88Q99836 296 aa12.95□□□□□ -0.34
PTPMT1-204ENST00000527079 CCDC8Q9H0W5 538 aaPredicted RBP12.95□□□□□ -0.34
PTPMT1-204ENST00000527079 CSB-PGBD3P0DP91 1061 aa12.95□□□□□ -0.34
PTPMT1-204ENST00000527079 CREB3L3Q68CJ9 461 aa12.95□□□□□ -0.34
PTPMT1-204ENST00000527079 RBM8AQ9Y5S9 174 aaKnown RBP12.95□□□□□ -0.34
PTPMT1-204ENST00000527079 TNS3Q68CZ2 1445 aa12.94□□□□□ -0.34
PTPMT1-204ENST00000527079 NMIQ13287 307 aaPredicted RBP12.94□□□□□ -0.34
PTPMT1-204ENST00000527079 ADCK5Q3MIX3 580 aa12.94□□□□□ -0.34
PTPMT1-204ENST00000527079 RNF20Q5VTR2 975 aa12.94□□□□□ -0.34
PTPMT1-204ENST00000527079 AFDNP55196 1824 aaKnown RBP12.94□□□□□ -0.34
PTPMT1-204ENST00000527079 PARP4Q9UKK3 1724 aaKnown RBP12.94□□□□□ -0.34
PTPMT1-204ENST00000527079 F13A1P00488 732 aa12.93□□□□□ -0.34
PTPMT1-204ENST00000527079 KCNJ4P48050 445 aa12.93□□□□□ -0.34
PTPMT1-204ENST00000527079 CSPP1Q1MSJ5 1256 aa12.93□□□□□ -0.34
PTPMT1-204ENST00000527079 FAM227BQ96M60 508 aa12.93□□□□□ -0.34
PTPMT1-204ENST00000527079 FSD1Q9BTV5 496 aa12.93□□□□□ -0.34
PTPMT1-204ENST00000527079 SIL1Q9H173 461 aa12.93□□□□□ -0.34
PTPMT1-204ENST00000527079 TSPY26PQ9H489 355 aa12.93□□□□□ -0.34
PTPMT1-204ENST00000527079 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.93□□□□□ -0.34
PTPMT1-204ENST00000527079 TMEM94Q12767 1356 aa12.93□□□□□ -0.34
PTPMT1-204ENST00000527079 LAMB4A4D0S4 1761 aa12.93□□□□□ -0.34
PTPMT1-204ENST00000527079 CPDO75976 1380 aa12.93□□□□□ -0.34
PTPMT1-204ENST00000527079 JCADQ9P266 1359 aa12.93□□□□□ -0.34
PTPMT1-204ENST00000527079 MED23Q9ULK4 1368 aa12.93□□□□□ -0.34
PTPMT1-204ENST00000527079 RABL6Q3YEC7 729 aaPredicted RBP12.93□□□□□ -0.34
PTPMT1-204ENST00000527079 ALDH8A1Q9H2A2 487 aaPredicted RBP12.93□□□□□ -0.34
PTPMT1-204ENST00000527079 TLR7Q9NYK1 1049 aaKnown RBP12.93□□□□□ -0.34
PTPMT1-204ENST00000527079 ARFGEF2Q9Y6D5 1785 aa12.93□□□□□ -0.34
PTPMT1-204ENST00000527079 RFX7Q2KHR2 1363 aa12.92□□□□□ -0.34
PTPMT1-204ENST00000527079 CYP27B1O15528 508 aa12.92□□□□□ -0.34
PTPMT1-204ENST00000527079 GADD45BO75293 160 aaPredicted RBP12.92□□□□□ -0.34
PTPMT1-204ENST00000527079 LETM1O95202 739 aaPredicted RBP12.92□□□□□ -0.34
PTPMT1-204ENST00000527079 CPA1P15085 419 aa12.92□□□□□ -0.34
PTPMT1-204ENST00000527079 ATP5JP18859 108 aa12.92□□□□□ -0.34
PTPMT1-204ENST00000527079 MSNP26038 577 aaKnown RBP12.92□□□□□ -0.34
PTPMT1-204ENST00000527079 UBE2HP62256 183 aa12.92□□□□□ -0.34
PTPMT1-204ENST00000527079 ANKRD1Q15327 319 aa12.92□□□□□ -0.34
PTPMT1-204ENST00000527079 EPHA10Q5JZY3 1008 aa12.92□□□□□ -0.34
PTPMT1-204ENST00000527079 CADPS2Q86UW7 1296 aa12.92□□□□□ -0.34
PTPMT1-204ENST00000527079 BOLA2Q9H3K6 86 aa12.92□□□□□ -0.34
PTPMT1-204ENST00000527079 HMG20BQ9P0W2 317 aa12.92□□□□□ -0.34
PTPMT1-204ENST00000527079 USP16Q9Y5T5 823 aa12.92□□□□□ -0.34
PTPMT1-204ENST00000527079 SLC27A2O14975 620 aa12.92□□□□□ -0.34
PTPMT1-204ENST00000527079 LARGE1O95461 756 aa12.92□□□□□ -0.34
PTPMT1-204ENST00000527079 GJB2P29033 226 aa12.92□□□□□ -0.34
PTPMT1-204ENST00000527079 RFX5P48382 616 aaPredicted RBP12.92□□□□□ -0.34
PTPMT1-204ENST00000527079 TSGA10IPQ3SY00 556 aa12.92□□□□□ -0.34
PTPMT1-204ENST00000527079 CCDC83Q8IWF9 413 aa12.92□□□□□ -0.34
PTPMT1-204ENST00000527079 PTPN12Q05209 780 aaKnown RBP12.91□□□□□ -0.34
PTPMT1-204ENST00000527079 CCDC183Q5T5S1 534 aa12.91□□□□□ -0.34
PTPMT1-204ENST00000527079 FAM184AQ8NB25 1140 aa12.91□□□□□ -0.34
PTPMT1-204ENST00000527079 NAP1L5Q96NT1 182 aaPredicted RBP12.91□□□□□ -0.34
PTPMT1-204ENST00000527079 GDPD2Q9HCC8 539 aa12.91□□□□□ -0.34
PTPMT1-204ENST00000527079 A0A0D9SFI3 127 aa12.91□□□□□ -0.34
PTPMT1-204ENST00000527079 CABP4P57796 275 aa12.91□□□□□ -0.34
PTPMT1-204ENST00000527079 FOXD4L6Q3SYB3 417 aaPredicted RBP12.91□□□□□ -0.34
PTPMT1-204ENST00000527079 TNNI3KQ59H18 835 aa12.91□□□□□ -0.34
PTPMT1-204ENST00000527079 FOXD4L3Q6VB84 417 aaPredicted RBP12.91□□□□□ -0.34
PTPMT1-204ENST00000527079 PLBD2Q8NHP8 589 aa12.91□□□□□ -0.34
PTPMT1-204ENST00000527079 KLHDC4Q8TBB5 520 aa12.91□□□□□ -0.34
PTPMT1-204ENST00000527079 LARP6Q9BRS8 491 aaKnown RBP12.91□□□□□ -0.34
PTPMT1-204ENST00000527079 NOL7Q9UMY1 257 aaKnown RBP12.91□□□□□ -0.34
PTPMT1-204ENST00000527079 CNPY2Q9Y2B0 182 aa12.91□□□□□ -0.34
PTPMT1-204ENST00000527079 FPGT-TNNI3KV9GXZ4 949 aa12.91□□□□□ -0.34
PTPMT1-204ENST00000527079 STRCP1A6NGW2 1772 aa12.9□□□□□ -0.34
PTPMT1-204ENST00000527079 ME3Q16798 604 aa12.9□□□□□ -0.34
PTPMT1-204ENST00000527079 BLOC1S2Q6QNY1 142 aa12.9□□□□□ -0.34
PTPMT1-204ENST00000527079 MTMR6Q9Y217 621 aa12.9□□□□□ -0.34
PTPMT1-204ENST00000527079 SPATA31A3Q5VYP0 1347 aa12.9□□□□□ -0.34
PTPMT1-204ENST00000527079 MCM5P33992 734 aa12.9□□□□□ -0.35
PTPMT1-204ENST00000527079 UVSSAQ2YD98 709 aa12.9□□□□□ -0.35
PTPMT1-204ENST00000527079 GLI3P10071 1580 aa12.89□□□□□ -0.35
PTPMT1-204ENST00000527079 PDCP20941 246 aa12.89□□□□□ -0.35
PTPMT1-204ENST00000527079 KRT32Q14532 448 aa12.89□□□□□ -0.35
PTPMT1-204ENST00000527079 USPL1Q5W0Q7 1092 aa12.89□□□□□ -0.35
PTPMT1-204ENST00000527079 UBE3BQ7Z3V4 1068 aa12.89□□□□□ -0.35
PTPMT1-204ENST00000527079 TICAM2Q86XR7 235 aa12.89□□□□□ -0.35
PTPMT1-204ENST00000527079 DDX17Q92841 729 aaKnown RBP12.89□□□□□ -0.35
PTPMT1-204ENST00000527079 DBNLQ9UJU6 430 aaKnown RBP12.89□□□□□ -0.35
PTPMT1-204ENST00000527079 A0A087WZG4 1122 aa12.88□□□□□ -0.35
PTPMT1-204ENST00000527079 TAF5LO75529 589 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms