RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 KIF1BPQ96EK5 621 aa25.37■■□□□ 1.65
SMCO4-203ENST00000526869 ARXQ96QS3 562 aa25.37■■□□□ 1.65
SMCO4-203ENST00000526869 TBC1D2BQ9UPU7 963 aa25.37■■□□□ 1.65
SMCO4-203ENST00000526869 CDHR2Q9BYE9 1310 aa25.37■■□□□ 1.65
SMCO4-203ENST00000526869 CAMTA2O94983 1202 aa25.36■■□□□ 1.65
SMCO4-203ENST00000526869 HMGB2P26583 209 aaKnown RBP25.36■■□□□ 1.65
SMCO4-203ENST00000526869 PLEKHM2Q8IWE5 1019 aa25.36■■□□□ 1.65
SMCO4-203ENST00000526869 ZNF34Q8IZ26 560 aa25.36■■□□□ 1.65
SMCO4-203ENST00000526869 ZBTB38Q8NAP3 1195 aaPredicted RBP25.36■■□□□ 1.65
SMCO4-203ENST00000526869 SCN7AQ01118 1682 aa25.36■■□□□ 1.65
SMCO4-203ENST00000526869 FOXO4P98177 505 aa25.35■■□□□ 1.65
SMCO4-203ENST00000526869 PLA2G12BQ9BX93 195 aa25.35■■□□□ 1.65
SMCO4-203ENST00000526869 C4BP0C0L5 1744 aa25.34■■□□□ 1.65
SMCO4-203ENST00000526869 SMARCA5O60264 1052 aaPredicted RBP25.34■■□□□ 1.65
SMCO4-203ENST00000526869 RPS6KA4O75676 772 aa25.34■■□□□ 1.65
SMCO4-203ENST00000526869 ZNF652Q9Y2D9 606 aa25.34■■□□□ 1.65
SMCO4-203ENST00000526869 APBB1O00213 710 aa25.33■■□□□ 1.65
SMCO4-203ENST00000526869 CLEC4GQ6UXB4 293 aa25.33■■□□□ 1.65
SMCO4-203ENST00000526869 RHPN1Q8TCX5 695 aa25.33■■□□□ 1.65
SMCO4-203ENST00000526869 OSBPL3Q9H4L5 887 aa25.33■■□□□ 1.65
SMCO4-203ENST00000526869 COPRSQ9NQ92 184 aa25.33■■□□□ 1.65
SMCO4-203ENST00000526869 SALL3Q9BXA9 1300 aa25.33■■□□□ 1.64
SMCO4-203ENST00000526869 PARP10Q53GL7 1025 aa25.32■■□□□ 1.64
SMCO4-203ENST00000526869 SLC27A3Q5K4L6 730 aa25.32■■□□□ 1.64
SMCO4-203ENST00000526869 RFX5P48382 616 aaPredicted RBP25.31■■□□□ 1.64
SMCO4-203ENST00000526869 JARID2Q92833 1246 aaPredicted RBP25.31■■□□□ 1.64
SMCO4-203ENST00000526869 OS9Q13438 667 aaPredicted RBP25.3■■□□□ 1.64
SMCO4-203ENST00000526869 LMBR1LQ6UX01 489 aa25.3■■□□□ 1.64
SMCO4-203ENST00000526869 C16orf71Q8IYS4 520 aaPredicted RBP25.3■■□□□ 1.64
SMCO4-203ENST00000526869 AOX1Q06278 1338 aa25.3■■□□□ 1.64
SMCO4-203ENST00000526869 GPTP24298 496 aa25.29■■□□□ 1.64
SMCO4-203ENST00000526869 G3BP1Q13283 466 aaKnown RBP eCLIP25.29■■□□□ 1.64
SMCO4-203ENST00000526869 TTC22Q5TAA0 569 aa25.29■■□□□ 1.64
SMCO4-203ENST00000526869 AK7Q96M32 723 aa25.29■■□□□ 1.64
SMCO4-203ENST00000526869 RGS17Q9UGC6 210 aaPredicted RBP25.29■■□□□ 1.64
SMCO4-203ENST00000526869 STAP2Q9UGK3 403 aa25.29■■□□□ 1.64
SMCO4-203ENST00000526869 UBN2Q6ZU65 1347 aa25.29■■□□□ 1.64
SMCO4-203ENST00000526869 TRIM37O94972 964 aa25.28■■□□□ 1.64
SMCO4-203ENST00000526869 KCNQ4P56696 695 aa25.28■■□□□ 1.64
SMCO4-203ENST00000526869 PA2G4Q9UQ80 394 aaKnown RBP25.28■■□□□ 1.64
SMCO4-203ENST00000526869 PDE1AP54750 535 aa25.27■■□□□ 1.64
SMCO4-203ENST00000526869 PTPN12Q05209 780 aaKnown RBP25.27■■□□□ 1.64
SMCO4-203ENST00000526869 OTUD7AQ8TE49 926 aaPredicted RBP25.27■■□□□ 1.64
SMCO4-203ENST00000526869 NARFQ9UHQ1 456 aa25.27■■□□□ 1.64
SMCO4-203ENST00000526869 RTCBQ9Y3I0 505 aaKnown RBP25.27■■□□□ 1.64
SMCO4-203ENST00000526869 GNPATO15228 680 aa25.26■■□□□ 1.63
SMCO4-203ENST00000526869 FAM89AQ96GI7 184 aa25.26■■□□□ 1.63
SMCO4-203ENST00000526869 TRMT112Q9UI30 125 aaKnown RBP25.26■■□□□ 1.63
SMCO4-203ENST00000526869 LAMB2P55268 1798 aa25.26■■□□□ 1.63
SMCO4-203ENST00000526869 CSF1RP07333 972 aa25.25■■□□□ 1.63
SMCO4-203ENST00000526869 HSP90B1P14625 803 aaKnown RBP25.25■■□□□ 1.63
SMCO4-203ENST00000526869 MX1P20591 662 aa25.25■■□□□ 1.63
SMCO4-203ENST00000526869 USP42Q9H9J4 1324 aaKnown RBP25.25■■□□□ 1.63
SMCO4-203ENST00000526869 MYH3P11055 1940 aa25.24■■□□□ 1.63
SMCO4-203ENST00000526869 ADRA2BP18089 450 aa25.24■■□□□ 1.63
SMCO4-203ENST00000526869 RTL5Q5HYW3 569 aaPredicted RBP25.24■■□□□ 1.63
SMCO4-203ENST00000526869 CLASRPQ8N2M8 674 aaKnown RBP25.24■■□□□ 1.63
SMCO4-203ENST00000526869 UTP14AQ9BVJ6 771 aaKnown RBP25.24■■□□□ 1.63
SMCO4-203ENST00000526869 FBXO3Q9UK99 471 aa25.24■■□□□ 1.63
SMCO4-203ENST00000526869 RGPD3A6NKT7 1758 aaPredicted RBP25.23■■□□□ 1.63
SMCO4-203ENST00000526869 RGPD4Q7Z3J3 1758 aa25.23■■□□□ 1.63
SMCO4-203ENST00000526869 IRS4O14654 1257 aaPredicted RBP25.23■■□□□ 1.63
SMCO4-203ENST00000526869 GSPT1P15170 499 aaKnown RBP25.23■■□□□ 1.63
SMCO4-203ENST00000526869 IL1RAPL2Q9NP60 686 aa25.23■■□□□ 1.63
SMCO4-203ENST00000526869 LRRC4BQ9NT99 713 aa25.23■■□□□ 1.63
SMCO4-203ENST00000526869 C4AP0C0L4 1744 aa25.23■■□□□ 1.63
SMCO4-203ENST00000526869 SH3TC1Q8TE82 1336 aa25.22■■□□□ 1.63
SMCO4-203ENST00000526869 PDE8AO60658 829 aa25.22■■□□□ 1.63
SMCO4-203ENST00000526869 SASH1O94885 1247 aa25.22■■□□□ 1.63
SMCO4-203ENST00000526869 POTEAQ6S8J7 498 aa25.22■■□□□ 1.63
SMCO4-203ENST00000526869 NIP7Q9Y221 180 aaKnown RBP eCLIP25.22■■□□□ 1.63
SMCO4-203ENST00000526869 COL24A1Q17RW2 1714 aa25.22■■□□□ 1.63
SMCO4-203ENST00000526869 TUBGCP6Q96RT7 1819 aa25.21■■□□□ 1.63
SMCO4-203ENST00000526869 PLSCR1O15162 318 aa25.21■■□□□ 1.63
SMCO4-203ENST00000526869 SUSD4Q5VX71 490 aa25.21■■□□□ 1.63
SMCO4-203ENST00000526869 CHMP3Q9Y3E7 222 aa25.21■■□□□ 1.63
SMCO4-203ENST00000526869 UBR3Q6ZT12 1888 aa25.21■■□□□ 1.63
SMCO4-203ENST00000526869 TNS1Q9HBL0 1735 aaKnown RBP25.2■■□□□ 1.63
SMCO4-203ENST00000526869 CIAO1O76071 339 aa25.2■■□□□ 1.62
SMCO4-203ENST00000526869 NTSR2O95665 410 aa25.2■■□□□ 1.62
SMCO4-203ENST00000526869 CTSWP56202 376 aa25.2■■□□□ 1.62
SMCO4-203ENST00000526869 TTC41PQ6P2S7 1318 aa25.19■■□□□ 1.62
SMCO4-203ENST00000526869 EIF5BO60841 1220 aaKnown RBP25.19■■□□□ 1.62
SMCO4-203ENST00000526869 ZPR1O75312 459 aa25.19■■□□□ 1.62
SMCO4-203ENST00000526869 SIL1Q9H173 461 aa25.19■■□□□ 1.62
SMCO4-203ENST00000526869 DDX60Q8IY21 1712 aaKnown RBP25.18■■□□□ 1.62
SMCO4-203ENST00000526869 CDC45O75419 566 aa25.18■■□□□ 1.62
SMCO4-203ENST00000526869 CCDC57Q2TAC2 916 aa25.18■■□□□ 1.62
SMCO4-203ENST00000526869 TTLL11Q8NHH1 800 aa25.18■■□□□ 1.62
SMCO4-203ENST00000526869 KLHDC4Q8TBB5 520 aa25.18■■□□□ 1.62
SMCO4-203ENST00000526869 GPATCH3Q96I76 525 aa25.18■■□□□ 1.62
SMCO4-203ENST00000526869 BCL2L12Q9HB09 334 aa25.18■■□□□ 1.62
SMCO4-203ENST00000526869 IL15P40933 162 aaPredicted RBP25.17■■□□□ 1.62
SMCO4-203ENST00000526869 TXNRD1Q16881 649 aa25.17■■□□□ 1.62
SMCO4-203ENST00000526869 TRAPPC3LQ5T215 181 aa25.17■■□□□ 1.62
SMCO4-203ENST00000526869 ARHGEF1Q92888 912 aaKnown RBP25.17■■□□□ 1.62
SMCO4-203ENST00000526869 RTL9Q8NET4 1388 aa25.17■■□□□ 1.62
SMCO4-203ENST00000526869 EYA2O00167 538 aa25.16■■□□□ 1.62
SMCO4-203ENST00000526869 IFIT5Q13325 482 aaKnown RBP25.16■■□□□ 1.62
SMCO4-203ENST00000526869 USPL1Q5W0Q7 1092 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms