RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 INHAP05111 366 aa8.74□□□□□ -1.01
ATPAF1-208ENST00000526821 HDGFL1Q5TGJ6 251 aa8.74□□□□□ -1.01
ATPAF1-208ENST00000526821 TRIM50Q86XT4 487 aa8.74□□□□□ -1.01
ATPAF1-208ENST00000526821 COL25A1Q9BXS0 654 aaPredicted RBP8.74□□□□□ -1.01
ATPAF1-208ENST00000526821 ZC3H13Q5T200 1668 aaKnown RBP8.74□□□□□ -1.01
ATPAF1-208ENST00000526821 CEP152O94986 1710 aa8.74□□□□□ -1.01
ATPAF1-208ENST00000526821 SPHKAPQ2M3C7 1700 aa8.74□□□□□ -1.01
ATPAF1-208ENST00000526821 SIGLEC1Q9BZZ2 1709 aa8.74□□□□□ -1.01
ATPAF1-208ENST00000526821 NEURL4Q96JN8 1562 aa8.73□□□□□ -1.01
ATPAF1-208ENST00000526821 NPATQ14207 1427 aa8.73□□□□□ -1.01
ATPAF1-208ENST00000526821 SPATA31E1Q6ZUB1 1445 aa8.73□□□□□ -1.01
ATPAF1-208ENST00000526821 A0A1B0GTH6 734 aa8.73□□□□□ -1.01
ATPAF1-208ENST00000526821 POM121CA8CG34 1229 aa8.73□□□□□ -1.01
ATPAF1-208ENST00000526821 USP17L5A8MUK1 530 aa8.73□□□□□ -1.01
ATPAF1-208ENST00000526821 BACH1O14867 736 aa8.73□□□□□ -1.01
ATPAF1-208ENST00000526821 F11P03951 625 aa8.73□□□□□ -1.01
ATPAF1-208ENST00000526821 GGT6Q6P531 493 aa8.73□□□□□ -1.01
ATPAF1-208ENST00000526821 RHBDD1Q8TEB9 315 aa8.73□□□□□ -1.01
ATPAF1-208ENST00000526821 CLUAP1Q96AJ1 413 aa8.73□□□□□ -1.01
ATPAF1-208ENST00000526821 CNTNAP3BQ96NU0 1288 aa8.73□□□□□ -1.01
ATPAF1-208ENST00000526821 TRERF1Q96PN7 1200 aa8.73□□□□□ -1.01
ATPAF1-208ENST00000526821 CNTNAP3Q9BZ76 1288 aa8.73□□□□□ -1.01
ATPAF1-208ENST00000526821 CSB-PGBD3P0DP91 1061 aa8.72□□□□□ -1.01
ATPAF1-208ENST00000526821 ATP1A2P50993 1020 aa8.72□□□□□ -1.01
ATPAF1-208ENST00000526821 NCOA4Q13772 614 aa8.72□□□□□ -1.01
ATPAF1-208ENST00000526821 NBPF8Q3BBV2 869 aa8.72□□□□□ -1.01
ATPAF1-208ENST00000526821 PGBD3Q8N328 593 aa8.72□□□□□ -1.01
ATPAF1-208ENST00000526821 HRH3Q9Y5N1 445 aa8.72□□□□□ -1.01
ATPAF1-208ENST00000526821 WASHC2CQ9Y4E1 1318 aa8.72□□□□□ -1.01
ATPAF1-208ENST00000526821 CLTCL1P53675 1640 aa8.72□□□□□ -1.01
ATPAF1-208ENST00000526821 CAMSAP1Q5T5Y3 1602 aa8.72□□□□□ -1.01
ATPAF1-208ENST00000526821 NOS1P29475 1434 aa8.71□□□□□ -1.01
ATPAF1-208ENST00000526821 A6NJR5 290 aa8.71□□□□□ -1.02
ATPAF1-208ENST00000526821 PHKA2P46019 1235 aa8.71□□□□□ -1.02
ATPAF1-208ENST00000526821 GTF2IP78347 998 aa8.71□□□□□ -1.02
ATPAF1-208ENST00000526821 GPR161Q8N6U8 529 aaKnown RBP8.71□□□□□ -1.02
ATPAF1-208ENST00000526821 FHDC1Q9C0D6 1143 aaPredicted RBP8.71□□□□□ -1.02
ATPAF1-208ENST00000526821 CNTLNQ9NXG0 1405 aa8.71□□□□□ -1.02
ATPAF1-208ENST00000526821 SMTNP53814 917 aa8.7□□□□□ -1.02
ATPAF1-208ENST00000526821 ZNF837Q96EG3 531 aaPredicted RBP8.7□□□□□ -1.02
ATPAF1-208ENST00000526821 NIFKQ9BYG3 293 aaKnown RBP8.7□□□□□ -1.02
ATPAF1-208ENST00000526821 NUCKS1Q9H1E3 243 aaKnown RBP8.7□□□□□ -1.02
ATPAF1-208ENST00000526821 RBM19Q9Y4C8 960 aaKnown RBP8.7□□□□□ -1.02
ATPAF1-208ENST00000526821 ATP9BO43861 1147 aa8.69□□□□□ -1.02
ATPAF1-208ENST00000526821 SCNN1DP51172 638 aa8.69□□□□□ -1.02
ATPAF1-208ENST00000526821 C4orf17Q53FE4 359 aa8.69□□□□□ -1.02
ATPAF1-208ENST00000526821 PLEKHM2Q8IWE5 1019 aa8.69□□□□□ -1.02
ATPAF1-208ENST00000526821 SERTAD1Q9UHV2 236 aa8.69□□□□□ -1.02
ATPAF1-208ENST00000526821 NSFL1CQ9UNZ2 370 aaKnown RBP8.69□□□□□ -1.02
ATPAF1-208ENST00000526821 USP17L3A6NCW0 530 aa8.68□□□□□ -1.02
ATPAF1-208ENST00000526821 USP17L4A6NCW7 530 aa8.68□□□□□ -1.02
ATPAF1-208ENST00000526821 LBRQ14739 615 aaKnown RBP8.68□□□□□ -1.02
ATPAF1-208ENST00000526821 EFHC2Q5JST6 749 aa8.68□□□□□ -1.02
ATPAF1-208ENST00000526821 USP17L2Q6R6M4 530 aa8.68□□□□□ -1.02
ATPAF1-208ENST00000526821 TBC1D9Q6ZT07 1266 aa8.68□□□□□ -1.02
ATPAF1-208ENST00000526821 USP17L1Q7RTZ2 530 aa8.68□□□□□ -1.02
ATPAF1-208ENST00000526821 DEPDC4Q8N2C3 294 aa8.68□□□□□ -1.02
ATPAF1-208ENST00000526821 GLMNQ92990 594 aa8.68□□□□□ -1.02
ATPAF1-208ENST00000526821 CALR3Q96L12 384 aaKnown RBP8.68□□□□□ -1.02
ATPAF1-208ENST00000526821 GPAMQ9HCL2 828 aa8.68□□□□□ -1.02
ATPAF1-208ENST00000526821 CUEDC1Q9NWM3 386 aaPredicted RBP8.68□□□□□ -1.02
ATPAF1-208ENST00000526821 PHF24Q9UPV7 400 aa8.68□□□□□ -1.02
ATPAF1-208ENST00000526821 PCDHGA11Q9Y5H2 935 aa8.68□□□□□ -1.02
ATPAF1-208ENST00000526821 PRAG1Q86YV5 1406 aa8.68□□□□□ -1.02
ATPAF1-208ENST00000526821 RALGAPBQ86X10 1494 aa8.68□□□□□ -1.02
ATPAF1-208ENST00000526821 UGGT1Q9NYU2 1555 aa8.68□□□□□ -1.02
ATPAF1-208ENST00000526821 PIK3C2BO00750 1634 aa8.68□□□□□ -1.02
ATPAF1-208ENST00000526821 SYNMO15061 1565 aa8.67□□□□□ -1.02
ATPAF1-208ENST00000526821 STAU1O95793 577 aaKnown RBP8.67□□□□□ -1.02
ATPAF1-208ENST00000526821 DBN1Q16643 649 aa8.67□□□□□ -1.02
ATPAF1-208ENST00000526821 NBPF1Q3BBV0 1214 aa8.67□□□□□ -1.02
ATPAF1-208ENST00000526821 FNBP4Q8N3X1 1017 aaPredicted RBP8.67□□□□□ -1.02
ATPAF1-208ENST00000526821 DCAF11Q8TEB1 546 aa8.67□□□□□ -1.02
ATPAF1-208ENST00000526821 ADGRB3O60242 1522 aa8.66□□□□□ -1.02
ATPAF1-208ENST00000526821 A6NJY4 79 aa8.66□□□□□ -1.02
ATPAF1-208ENST00000526821 PLA2G4AP47712 749 aa8.66□□□□□ -1.02
ATPAF1-208ENST00000526821 C1orf216Q8TAB5 229 aa8.66□□□□□ -1.02
ATPAF1-208ENST00000526821 ADAMTS19Q8TE59 1207 aa8.66□□□□□ -1.02
ATPAF1-208ENST00000526821 GTPBP3Q969Y2 492 aaKnown RBP8.66□□□□□ -1.02
ATPAF1-208ENST00000526821 SLC4A9Q96Q91 983 aa8.66□□□□□ -1.02
ATPAF1-208ENST00000526821 MBIPQ9NS73 344 aa8.66□□□□□ -1.02
ATPAF1-208ENST00000526821 GPRASP1Q5JY77 1395 aa8.65□□□□□ -1.02
ATPAF1-208ENST00000526821 TMEM229AB2RXF0 380 aa8.65□□□□□ -1.02
ATPAF1-208ENST00000526821 CDK2AP1O14519 115 aa8.65□□□□□ -1.02
ATPAF1-208ENST00000526821 KRT76Q01546 638 aa8.65□□□□□ -1.02
ATPAF1-208ENST00000526821 SRSF11Q05519 484 aaKnown RBP8.65□□□□□ -1.02
ATPAF1-208ENST00000526821 RGL3Q3MIN7 710 aa8.65□□□□□ -1.02
ATPAF1-208ENST00000526821 RNFT1Q5M7Z0 435 aa8.65□□□□□ -1.02
ATPAF1-208ENST00000526821 SVOPQ8N4V2 548 aa8.65□□□□□ -1.02
ATPAF1-208ENST00000526821 AIDAQ96BJ3 306 aa8.65□□□□□ -1.02
ATPAF1-208ENST00000526821 PREX1Q8TCU6 1659 aa8.65□□□□□ -1.03
ATPAF1-208ENST00000526821 MYOM2P54296 1465 aa8.64□□□□□ -1.03
ATPAF1-208ENST00000526821 ERVK-7P63135 1459 aa8.64□□□□□ -1.03
ATPAF1-208ENST00000526821 HSPA5P11021 654 aaKnown RBP8.64□□□□□ -1.03
ATPAF1-208ENST00000526821 TATP17735 454 aaPredicted RBP8.64□□□□□ -1.03
ATPAF1-208ENST00000526821 MSX1P28360 303 aa8.64□□□□□ -1.03
ATPAF1-208ENST00000526821 MAP3K10Q02779 954 aa8.64□□□□□ -1.03
ATPAF1-208ENST00000526821 DIEXFQ68CQ4 756 aaKnown RBP8.64□□□□□ -1.03
ATPAF1-208ENST00000526821 UCN2Q96RP3 112 aa8.64□□□□□ -1.03
ATPAF1-208ENST00000526821 DNAAF2Q9NVR5 837 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms