RNA–Protein interactions for RNA: ENST00000526232.1

CPNE7-204, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-204ENST00000526232 CCDC93Q567U6 631 aa23.37■■□□□ 1.33
CPNE7-204ENST00000526232 PLBD2Q8NHP8 589 aa23.37■■□□□ 1.33
CPNE7-204ENST00000526232 RPGRQ92834 1020 aaKnown RBP23.37■■□□□ 1.33
CPNE7-204ENST00000526232 CACNA1SQ13698 1873 aa23.36■■□□□ 1.33
CPNE7-204ENST00000526232 KIF3CO14782 793 aa23.36■■□□□ 1.33
CPNE7-204ENST00000526232 PRELPP51888 382 aa23.36■■□□□ 1.33
CPNE7-204ENST00000526232 TCIRG1Q13488 830 aa23.36■■□□□ 1.33
CPNE7-204ENST00000526232 TIAM2Q8IVF5 1701 aa23.36■■□□□ 1.33
CPNE7-204ENST00000526232 ANKRD13DQ6ZTN6 518 aa23.35■■□□□ 1.33
CPNE7-204ENST00000526232 NLRP10Q86W26 655 aa23.35■■□□□ 1.33
CPNE7-204ENST00000526232 C8orf58Q8NAV2 365 aa23.35■■□□□ 1.33
CPNE7-204ENST00000526232 IL16Q14005 1332 aa23.34■■□□□ 1.33
CPNE7-204ENST00000526232 FER1L6Q2WGJ9 1857 aa23.34■■□□□ 1.33
CPNE7-204ENST00000526232 C7orf43Q8WVR3 580 aa23.34■■□□□ 1.33
CPNE7-204ENST00000526232 TSR2Q969E8 191 aaKnown RBP23.34■■□□□ 1.33
CPNE7-204ENST00000526232 NMRK2Q9NPI5 230 aa23.34■■□□□ 1.33
CPNE7-204ENST00000526232 HOXA10P31260 410 aaPredicted RBP23.32■■□□□ 1.32
CPNE7-204ENST00000526232 GOLGA2Q08379 1002 aa23.32■■□□□ 1.32
CPNE7-204ENST00000526232 CCDC30Q5VVM6 783 aa23.32■■□□□ 1.32
CPNE7-204ENST00000526232 FAM9BQ8IZU0 186 aa23.32■■□□□ 1.32
CPNE7-204ENST00000526232 RBM17Q96I25 401 aaKnown RBP23.32■■□□□ 1.32
CPNE7-204ENST00000526232 NLRP3Q96P20 1036 aa23.32■■□□□ 1.32
CPNE7-204ENST00000526232 TRMT112Q9UI30 125 aaKnown RBP23.32■■□□□ 1.32
CPNE7-204ENST00000526232 RTKN2Q8IZC4 609 aa23.31■■□□□ 1.32
CPNE7-204ENST00000526232 SH3TC1Q8TE82 1336 aa23.31■■□□□ 1.32
CPNE7-204ENST00000526232 SLC10A5Q5PT55 438 aa23.3■■□□□ 1.32
CPNE7-204ENST00000526232 FKBP4Q02790 459 aaKnown RBP eCLIP23.29■■□□□ 1.32
CPNE7-204ENST00000526232 C3orf67Q6ZVT6 689 aa23.29■■□□□ 1.32
CPNE7-204ENST00000526232 TSPYL6Q8N831 410 aa23.29■■□□□ 1.32
CPNE7-204ENST00000526232 CRAMP1Q96RY5 1269 aa23.29■■□□□ 1.32
CPNE7-204ENST00000526232 SALL2Q9Y467 1007 aaPredicted RBP23.29■■□□□ 1.32
CPNE7-204ENST00000526232 GLTPD2A6NH11 291 aa23.28■■□□□ 1.32
CPNE7-204ENST00000526232 CC2D2BQ6DHV5 1058 aa23.28■■□□□ 1.32
CPNE7-204ENST00000526232 RIC3Q7Z5B4 369 aa23.28■■□□□ 1.32
CPNE7-204ENST00000526232 ISCA1Q9BUE6 129 aa23.28■■□□□ 1.32
CPNE7-204ENST00000526232 PHAXQ9H814 394 aaKnown RBP23.28■■□□□ 1.32
CPNE7-204ENST00000526232 TOMM70O94826 608 aa23.27■■□□□ 1.32
CPNE7-204ENST00000526232 OLFM4Q6UX06 510 aa23.27■■□□□ 1.32
CPNE7-204ENST00000526232 WDR63Q8IWG1 891 aa23.27■■□□□ 1.32
CPNE7-204ENST00000526232 C16orf71Q8IYS4 520 aaPredicted RBP23.27■■□□□ 1.32
CPNE7-204ENST00000526232 STK31Q9BXU1 1019 aa23.27■■□□□ 1.32
CPNE7-204ENST00000526232 FANCIQ9NVI1 1328 aa23.27■■□□□ 1.32
CPNE7-204ENST00000526232 ATP5J2-PTCD1G3V325 749 aa23.26■■□□□ 1.31
CPNE7-204ENST00000526232 PPEF1O14829 653 aaPredicted RBP23.26■■□□□ 1.31
CPNE7-204ENST00000526232 DDX58O95786 925 aaKnown RBP23.26■■□□□ 1.31
CPNE7-204ENST00000526232 TWISTNBQ3B726 338 aaPredicted RBP23.26■■□□□ 1.31
CPNE7-204ENST00000526232 DPY19L2Q6NUT2 758 aa23.26■■□□□ 1.31
CPNE7-204ENST00000526232 HCLS1P14317 486 aaPredicted RBP23.25■■□□□ 1.31
CPNE7-204ENST00000526232 GRIPAP1Q4V328 841 aa23.25■■□□□ 1.31
CPNE7-204ENST00000526232 RRAGCQ9HB90 399 aa23.25■■□□□ 1.31
CPNE7-204ENST00000526232 CCDC88AQ3V6T2 1871 aa23.24■■□□□ 1.31
CPNE7-204ENST00000526232 DICER1Q9UPY3 1922 aaKnown RBP23.24■■□□□ 1.31
CPNE7-204ENST00000526232 TRIM28Q13263 835 aaKnown RBP23.24■■□□□ 1.31
CPNE7-204ENST00000526232 PSMD1Q99460 953 aa23.24■■□□□ 1.31
CPNE7-204ENST00000526232 ZNF277Q9NRM2 450 aaPredicted RBP23.24■■□□□ 1.31
CPNE7-204ENST00000526232 ABCC4O15439 1325 aa23.24■■□□□ 1.31
CPNE7-204ENST00000526232 SNED1Q8TER0 1413 aa23.24■■□□□ 1.31
CPNE7-204ENST00000526232 SYNE4Q8N205 404 aa23.23■■□□□ 1.31
CPNE7-204ENST00000526232 RBM46Q8TBY0 533 aaKnown RBP23.23■■□□□ 1.31
CPNE7-204ENST00000526232 ZNF428Q96B54 188 aa23.23■■□□□ 1.31
CPNE7-204ENST00000526232 TMX4Q9H1E5 349 aaPredicted RBP23.23■■□□□ 1.31
CPNE7-204ENST00000526232 MYD88Q99836 296 aa23.22■■□□□ 1.31
CPNE7-204ENST00000526232 HSPA6P17066 643 aa23.21■■□□□ 1.31
CPNE7-204ENST00000526232 IARSP41252 1262 aaKnown RBP23.21■■□□□ 1.31
CPNE7-204ENST00000526232 DDX46Q7L014 1031 aaKnown RBP23.21■■□□□ 1.31
CPNE7-204ENST00000526232 FAM89AQ96GI7 184 aa23.21■■□□□ 1.31
CPNE7-204ENST00000526232 LAMB2P55268 1798 aa23.2■■□□□ 1.3
CPNE7-204ENST00000526232 TCERG1O14776 1098 aaKnown RBP23.2■■□□□ 1.3
CPNE7-204ENST00000526232 VEGFAP15692 232 aaPredicted RBP23.2■■□□□ 1.3
CPNE7-204ENST00000526232 METTL22Q9BUU2 404 aaPredicted RBP23.19■■□□□ 1.3
CPNE7-204ENST00000526232 MYH16Q9H6N6 1097 aa23.19■■□□□ 1.3
CPNE7-204ENST00000526232 ATP6V0A2Q9Y487 856 aa23.19■■□□□ 1.3
CPNE7-204ENST00000526232 WDR90Q96KV7 1748 aa23.19■■□□□ 1.3
CPNE7-204ENST00000526232 BBOX1O75936 387 aa23.18■■□□□ 1.3
CPNE7-204ENST00000526232 HSP90B1P14625 803 aaKnown RBP23.18■■□□□ 1.3
CPNE7-204ENST00000526232 GRAPQ13588 217 aa23.18■■□□□ 1.3
CPNE7-204ENST00000526232 KSR2Q6VAB6 950 aa23.18■■□□□ 1.3
CPNE7-204ENST00000526232 ZBTB38Q8NAP3 1195 aaPredicted RBP23.18■■□□□ 1.3
CPNE7-204ENST00000526232 CCDC191Q8NCU4 936 aa23.18■■□□□ 1.3
CPNE7-204ENST00000526232 GRAPLQ8TC17 118 aaPredicted RBP23.18■■□□□ 1.3
CPNE7-204ENST00000526232 MAP3K2Q9Y2U5 619 aa23.18■■□□□ 1.3
CPNE7-204ENST00000526232 DDX60Q8IY21 1712 aaKnown RBP23.18■■□□□ 1.3
CPNE7-204ENST00000526232 IRS4O14654 1257 aaPredicted RBP23.17■■□□□ 1.3
CPNE7-204ENST00000526232 RTL5Q5HYW3 569 aaPredicted RBP23.17■■□□□ 1.3
CPNE7-204ENST00000526232 JDP2Q8WYK2 163 aa23.17■■□□□ 1.3
CPNE7-204ENST00000526232 CWC25Q9NXE8 425 aaPredicted RBP23.17■■□□□ 1.3
CPNE7-204ENST00000526232 SLC4A2P04920 1241 aa23.16■■□□□ 1.3
CPNE7-204ENST00000526232 EXOSC9Q06265 439 aaKnown RBP23.16■■□□□ 1.3
CPNE7-204ENST00000526232 NEXNQ0ZGT2 675 aa23.16■■□□□ 1.3
CPNE7-204ENST00000526232 FSTL1Q12841 308 aa23.16■■□□□ 1.3
CPNE7-204ENST00000526232 SF3B3Q15393 1217 aaKnown RBP23.16■■□□□ 1.3
CPNE7-204ENST00000526232 TMC4Q7Z404 712 aa23.16■■□□□ 1.3
CPNE7-204ENST00000526232 PI4KAP2A4QPH2 592 aa23.15■■□□□ 1.3
CPNE7-204ENST00000526232 DDNO94850 711 aaPredicted RBP23.15■■□□□ 1.3
CPNE7-204ENST00000526232 SLC51AQ86UW1 340 aa23.15■■□□□ 1.3
CPNE7-204ENST00000526232 PI4KAP1Q8N8J0 262 aa23.15■■□□□ 1.3
CPNE7-204ENST00000526232 ZNF541Q9H0D2 1346 aa23.14■■□□□ 1.3
CPNE7-204ENST00000526232 PCCAP05165 728 aaPredicted RBP23.14■■□□□ 1.29
CPNE7-204ENST00000526232 SP8Q8IXZ3 490 aa23.14■■□□□ 1.29
CPNE7-204ENST00000526232 SMC1BQ8NDV3 1235 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms