RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 TSC1Q92574 1164 aa9.48□□□□□ -0.89
BDNF-213ENST00000525950 NECTIN2Q92692 538 aa9.48□□□□□ -0.89
BDNF-213ENST00000525950 CBX8Q9HC52 389 aa9.48□□□□□ -0.89
BDNF-213ENST00000525950 ADCY9O60503 1353 aa9.48□□□□□ -0.89
BDNF-213ENST00000525950 VPS37CA5D8V6 355 aaPredicted RBP9.48□□□□□ -0.89
BDNF-213ENST00000525950 LIG1P18858 919 aa9.48□□□□□ -0.89
BDNF-213ENST00000525950 MPNDQ8N594 471 aa9.48□□□□□ -0.89
BDNF-213ENST00000525950 TNMDQ9H2S6 317 aa9.48□□□□□ -0.89
BDNF-213ENST00000525950 KCND1Q9NSA2 647 aa9.48□□□□□ -0.89
BDNF-213ENST00000525950 OGFRQ9NZT2 677 aa9.48□□□□□ -0.89
BDNF-213ENST00000525950 TBX22Q9Y458 520 aa9.48□□□□□ -0.89
BDNF-213ENST00000525950 PI4KAP2A4QPH2 592 aa9.47□□□□□ -0.89
BDNF-213ENST00000525950 SLC27A2O14975 620 aa9.47□□□□□ -0.89
BDNF-213ENST00000525950 CPA1P15085 419 aa9.47□□□□□ -0.89
BDNF-213ENST00000525950 PI4KAP1Q8N8J0 262 aa9.47□□□□□ -0.89
BDNF-213ENST00000525950 JARID2Q92833 1246 aaPredicted RBP9.47□□□□□ -0.89
BDNF-213ENST00000525950 NPHP4O75161 1426 aaPredicted RBP9.47□□□□□ -0.89
BDNF-213ENST00000525950 LMO7Q8WWI1 1683 aa9.47□□□□□ -0.89
BDNF-213ENST00000525950 MED23Q9ULK4 1368 aa9.47□□□□□ -0.89
BDNF-213ENST00000525950 IFIT2P09913 472 aaKnown RBP9.47□□□□□ -0.89
BDNF-213ENST00000525950 PTGS1P23219 599 aa9.47□□□□□ -0.89
BDNF-213ENST00000525950 RPS6KB1P23443 525 aa9.47□□□□□ -0.89
BDNF-213ENST00000525950 LEO1Q8WVC0 666 aaPredicted RBP9.47□□□□□ -0.89
BDNF-213ENST00000525950 ESF1Q9H501 851 aaKnown RBP9.47□□□□□ -0.89
BDNF-213ENST00000525950 MRC1P22897 1456 aa9.47□□□□□ -0.89
BDNF-213ENST00000525950 LMTK3Q96Q04 1460 aa9.47□□□□□ -0.89
BDNF-213ENST00000525950 RFX7Q2KHR2 1363 aa9.47□□□□□ -0.89
BDNF-213ENST00000525950 FAM69CQ0P6D2 419 aa9.47□□□□□ -0.89
BDNF-213ENST00000525950 CDC37L1Q7L3B6 337 aa9.47□□□□□ -0.89
BDNF-213ENST00000525950 NGDNQ8NEJ9 315 aaKnown RBP9.47□□□□□ -0.89
BDNF-213ENST00000525950 PLCB2Q00722 1185 aa9.46□□□□□ -0.89
BDNF-213ENST00000525950 KRT32Q14532 448 aa9.46□□□□□ -0.89
BDNF-213ENST00000525950 USPL1Q5W0Q7 1092 aa9.46□□□□□ -0.89
BDNF-213ENST00000525950 ZSCAN25Q6NSZ9 544 aa9.46□□□□□ -0.89
BDNF-213ENST00000525950 BLOC1S2Q6QNY1 142 aa9.46□□□□□ -0.89
BDNF-213ENST00000525950 CCDC186Q7Z3E2 898 aa9.46□□□□□ -0.89
BDNF-213ENST00000525950 SPC24Q8NBT2 197 aa9.46□□□□□ -0.89
BDNF-213ENST00000525950 LARP6Q9BRS8 491 aaKnown RBP9.46□□□□□ -0.89
BDNF-213ENST00000525950 DACT1Q9NYF0 836 aa9.46□□□□□ -0.89
BDNF-213ENST00000525950 CGNQ9P2M7 1197 aaKnown RBP9.46□□□□□ -0.89
BDNF-213ENST00000525950 ARHGAP23Q9P227 1491 aa9.46□□□□□ -0.89
BDNF-213ENST00000525950 HEG1Q9ULI3 1381 aa9.46□□□□□ -0.89
BDNF-213ENST00000525950 CTAGE5O15320 804 aa9.46□□□□□ -0.9
BDNF-213ENST00000525950 RBM6P78332 1123 aaKnown RBP9.46□□□□□ -0.9
BDNF-213ENST00000525950 CBX1P83916 185 aa9.46□□□□□ -0.9
BDNF-213ENST00000525950 OS9Q13438 667 aaPredicted RBP9.46□□□□□ -0.9
BDNF-213ENST00000525950 ANO6Q4KMQ2 910 aa9.46□□□□□ -0.9
BDNF-213ENST00000525950 SPATA32Q96LK8 384 aa9.46□□□□□ -0.9
BDNF-213ENST00000525950 ZSCAN16Q9H4T2 348 aaPredicted RBP9.46□□□□□ -0.9
BDNF-213ENST00000525950 DBF4Q9UBU7 674 aaPredicted RBP9.46□□□□□ -0.9
BDNF-213ENST00000525950 NCAPD2Q15021 1401 aa9.46□□□□□ -0.9
BDNF-213ENST00000525950 NCBP1Q09161 790 aaKnown RBP9.46□□□□□ -0.9
BDNF-213ENST00000525950 LUZP1Q86V48 1076 aa9.46□□□□□ -0.9
BDNF-213ENST00000525950 MRFAP1L1Q96HT8 127 aa9.46□□□□□ -0.9
BDNF-213ENST00000525950 CHPF2Q9P2E5 772 aa9.46□□□□□ -0.9
BDNF-213ENST00000525950 PHRF1Q9P1Y6 1649 aaKnown RBP9.45□□□□□ -0.9
BDNF-213ENST00000525950 GOLGA6L4A6NEF3 574 aa9.45□□□□□ -0.9
BDNF-213ENST00000525950 NLRP6P59044 892 aa9.45□□□□□ -0.9
BDNF-213ENST00000525950 ATL3Q6DD88 541 aa9.45□□□□□ -0.9
BDNF-213ENST00000525950 TICAM2Q86XR7 235 aa9.45□□□□□ -0.9
BDNF-213ENST00000525950 SOX12O15370 315 aa9.45□□□□□ -0.9
BDNF-213ENST00000525950 LTKP29376 864 aa9.45□□□□□ -0.9
BDNF-213ENST00000525950 GABPB1Q06547 395 aaPredicted RBP9.45□□□□□ -0.9
BDNF-213ENST00000525950 TOB2Q14106 344 aaPredicted RBP9.45□□□□□ -0.9
BDNF-213ENST00000525950 NECAB1Q8N987 351 aa9.45□□□□□ -0.9
BDNF-213ENST00000525950 NMIQ13287 307 aaPredicted RBP9.45□□□□□ -0.9
BDNF-213ENST00000525950 KSR2Q6VAB6 950 aa9.45□□□□□ -0.9
BDNF-213ENST00000525950 CTNNA3Q9UI47 895 aa9.45□□□□□ -0.9
BDNF-213ENST00000525950 RGPD8O14715 1765 aaPredicted RBP9.45□□□□□ -0.9
BDNF-213ENST00000525950 TNNT1P13805 278 aa9.44□□□□□ -0.9
BDNF-213ENST00000525950 ZNF165P49910 485 aa9.44□□□□□ -0.9
BDNF-213ENST00000525950 FAM193AP78312 1265 aa9.44□□□□□ -0.9
BDNF-213ENST00000525950 RESTQ13127 1097 aa9.44□□□□□ -0.9
BDNF-213ENST00000525950 TAF3Q5VWG9 929 aa9.44□□□□□ -0.9
BDNF-213ENST00000525950 TRIM5Q9C035 493 aa9.44□□□□□ -0.9
BDNF-213ENST00000525950 PRDM10Q9NQV6 1147 aa9.44□□□□□ -0.9
BDNF-213ENST00000525950 CFAP45Q9UL16 551 aa9.44□□□□□ -0.9
BDNF-213ENST00000525950 AMOTL2Q9Y2J4 779 aa9.44□□□□□ -0.9
BDNF-213ENST00000525950 AKAP4Q5JQC9 854 aa9.44□□□□□ -0.9
BDNF-213ENST00000525950 IP6K1Q92551 441 aa9.44□□□□□ -0.9
BDNF-213ENST00000525950 LLPHQ9BRT6 129 aaKnown RBP9.44□□□□□ -0.9
BDNF-213ENST00000525950 IQCB1Q15051 598 aa9.44□□□□□ -0.9
BDNF-213ENST00000525950 AACSQ86V21 672 aa9.44□□□□□ -0.9
BDNF-213ENST00000525950 MORC2Q9Y6X9 1032 aaPredicted RBP9.44□□□□□ -0.9
BDNF-213ENST00000525950 KCNJ4P48050 445 aa9.43□□□□□ -0.9
BDNF-213ENST00000525950 MLECQ14165 292 aa9.43□□□□□ -0.9
BDNF-213ENST00000525950 LARP1Q6PKG0 1096 aaKnown RBP9.43□□□□□ -0.9
BDNF-213ENST00000525950 GTF3C6Q969F1 213 aa9.43□□□□□ -0.9
BDNF-213ENST00000525950 PGBD1Q96JS3 809 aa9.43□□□□□ -0.9
BDNF-213ENST00000525950 DDX41Q9UJV9 622 aaKnown RBP9.43□□□□□ -0.9
BDNF-213ENST00000525950 NUTM2FA1L443 756 aa9.43□□□□□ -0.9
BDNF-213ENST00000525950 SASH1O94885 1247 aa9.43□□□□□ -0.9
BDNF-213ENST00000525950 EIF2S2P20042 333 aaKnown RBP9.43□□□□□ -0.9
BDNF-213ENST00000525950 CCDC112Q8NEF3 446 aa9.43□□□□□ -0.9
BDNF-213ENST00000525950 LINS1Q8NG48 757 aa9.43□□□□□ -0.9
BDNF-213ENST00000525950 FAM227BQ96M60 508 aa9.43□□□□□ -0.9
BDNF-213ENST00000525950 C9orf78Q9NZ63 289 aaPredicted RBP9.43□□□□□ -0.9
BDNF-213ENST00000525950 CLIP2Q9UDT6 1046 aa9.43□□□□□ -0.9
BDNF-213ENST00000525950 G3BP1Q13283 466 aaKnown RBP eCLIP9.43□□□□□ -0.9
BDNF-213ENST00000525950 DHX8Q14562 1220 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms