RNA–Protein interactions for RNA: ENST00000525797.1

AP002001.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP002001.1, Length 1,754 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002001.1-202ENST00000525797 FOXO3O43524 673 aa9.14□□□□□ -0.95
AP002001.1-202ENST00000525797 EIF4A2Q14240 407 aaKnown RBP9.14□□□□□ -0.95
AP002001.1-202ENST00000525797 KCNH5Q8NCM2 988 aa9.14□□□□□ -0.95
AP002001.1-202ENST00000525797 PRR7Q8TB68 274 aa9.14□□□□□ -0.95
AP002001.1-202ENST00000525797 LTBP4Q8N2S1 1624 aa9.14□□□□□ -0.95
AP002001.1-202ENST00000525797 COL18A1P39060 1754 aa9.14□□□□□ -0.95
AP002001.1-202ENST00000525797 IL16Q14005 1332 aa9.14□□□□□ -0.95
AP002001.1-202ENST00000525797 NPHP3Q7Z494 1330 aa9.14□□□□□ -0.95
AP002001.1-202ENST00000525797 MAPK8IP3Q9UPT6 1336 aa9.14□□□□□ -0.95
AP002001.1-202ENST00000525797 TNFRSF10AO00220 468 aa9.14□□□□□ -0.95
AP002001.1-202ENST00000525797 PPM1GO15355 546 aaPredicted RBP9.14□□□□□ -0.95
AP002001.1-202ENST00000525797 LIMD1Q9UGP4 676 aa9.14□□□□□ -0.95
AP002001.1-202ENST00000525797 NCAPD2Q15021 1401 aa9.13□□□□□ -0.95
AP002001.1-202ENST00000525797 RGPD5Q99666 1765 aa9.13□□□□□ -0.95
AP002001.1-202ENST00000525797 FAM208AQ9UK61 1670 aaKnown RBP9.13□□□□□ -0.95
AP002001.1-202ENST00000525797 IGSF1Q8N6C5 1336 aa9.13□□□□□ -0.95
AP002001.1-202ENST00000525797 ANP32AP39687 249 aaKnown RBP9.13□□□□□ -0.95
AP002001.1-202ENST00000525797 HSP90AB2PQ58FF8 381 aa9.13□□□□□ -0.95
AP002001.1-202ENST00000525797 KRT28Q7Z3Y7 464 aa9.13□□□□□ -0.95
AP002001.1-202ENST00000525797 IPO9Q96P70 1041 aaKnown RBP9.13□□□□□ -0.95
AP002001.1-202ENST00000525797 NUDT12Q9BQG2 462 aa9.13□□□□□ -0.95
AP002001.1-202ENST00000525797 ZBTB3Q9H5J0 574 aa9.13□□□□□ -0.95
AP002001.1-202ENST00000525797 RCAN3Q9UKA8 241 aa9.13□□□□□ -0.95
AP002001.1-202ENST00000525797 RGPD2P0DJD1 1756 aa9.13□□□□□ -0.95
AP002001.1-202ENST00000525797 ABCA3Q99758 1704 aa9.13□□□□□ -0.95
AP002001.1-202ENST00000525797 TNS3Q68CZ2 1445 aa9.13□□□□□ -0.95
AP002001.1-202ENST00000525797 LMO7Q8WWI1 1683 aa9.13□□□□□ -0.95
AP002001.1-202ENST00000525797 HOXC9P31274 260 aa9.12□□□□□ -0.95
AP002001.1-202ENST00000525797 PRKAR2BP31323 418 aa9.12□□□□□ -0.95
AP002001.1-202ENST00000525797 FOXC1Q12948 553 aa9.12□□□□□ -0.95
AP002001.1-202ENST00000525797 TRIM32Q13049 653 aa9.12□□□□□ -0.95
AP002001.1-202ENST00000525797 CABLES1Q8TDN4 633 aa9.12□□□□□ -0.95
AP002001.1-202ENST00000525797 GDF9O60383 454 aa9.12□□□□□ -0.95
AP002001.1-202ENST00000525797 PRR20EP86478 221 aa9.12□□□□□ -0.95
AP002001.1-202ENST00000525797 PRR20CP86479 221 aa9.12□□□□□ -0.95
AP002001.1-202ENST00000525797 PRR20DP86480 221 aa9.12□□□□□ -0.95
AP002001.1-202ENST00000525797 PRR20BP86481 221 aa9.12□□□□□ -0.95
AP002001.1-202ENST00000525797 PRR20AP86496 221 aa9.12□□□□□ -0.95
AP002001.1-202ENST00000525797 NFE2L2Q16236 605 aa9.11□□□□□ -0.95
AP002001.1-202ENST00000525797 PRPF38BQ5VTL8 546 aaKnown RBP9.11□□□□□ -0.95
AP002001.1-202ENST00000525797 ARHGEF25Q86VW2 580 aa9.11□□□□□ -0.95
AP002001.1-202ENST00000525797 IP6K1Q92551 441 aa9.11□□□□□ -0.95
AP002001.1-202ENST00000525797 FAM117AQ9C073 453 aa9.11□□□□□ -0.95
AP002001.1-202ENST00000525797 POLR3EQ9NVU0 708 aa9.11□□□□□ -0.95
AP002001.1-202ENST00000525797 PKD2L1Q9P0L9 805 aa9.11□□□□□ -0.95
AP002001.1-202ENST00000525797 LRRC37A3O60309 1634 aa9.11□□□□□ -0.95
AP002001.1-202ENST00000525797 VIRMAQ69YN4 1812 aaKnown RBP9.1□□□□□ -0.95
AP002001.1-202ENST00000525797 SOS2Q07890 1332 aaPredicted RBP9.1□□□□□ -0.95
AP002001.1-202ENST00000525797 CFAP99D6REC4 459 aa9.1□□□□□ -0.95
AP002001.1-202ENST00000525797 NEFMP07197 916 aa9.1□□□□□ -0.95
AP002001.1-202ENST00000525797 CCNYL3P0C7X3 344 aa9.1□□□□□ -0.95
AP002001.1-202ENST00000525797 AMPHP49418 695 aa9.1□□□□□ -0.95
AP002001.1-202ENST00000525797 CLK2P49760 499 aaKnown RBP9.1□□□□□ -0.95
AP002001.1-202ENST00000525797 RRP1P56182 461 aaKnown RBP9.1□□□□□ -0.95
AP002001.1-202ENST00000525797 QPCTQ16769 361 aa9.1□□□□□ -0.95
AP002001.1-202ENST00000525797 BRINP3Q76B58 766 aa9.1□□□□□ -0.95
AP002001.1-202ENST00000525797 PHACTR3Q96KR7 559 aa9.1□□□□□ -0.95
AP002001.1-202ENST00000525797 RRP7AQ9Y3A4 280 aaKnown RBP9.1□□□□□ -0.95
AP002001.1-202ENST00000525797 SPATA31A3Q5VYP0 1347 aa9.1□□□□□ -0.95
AP002001.1-202ENST00000525797 GCP02774 474 aa9.09□□□□□ -0.95
AP002001.1-202ENST00000525797 HMOX1P09601 288 aa9.09□□□□□ -0.95
AP002001.1-202ENST00000525797 CT47B1P0C2W7 299 aaPredicted RBP9.09□□□□□ -0.95
AP002001.1-202ENST00000525797 RIPK4P57078 832 aa9.09□□□□□ -0.95
AP002001.1-202ENST00000525797 PTPRNQ16849 979 aa9.09□□□□□ -0.95
AP002001.1-202ENST00000525797 DDRGK1Q96HY6 314 aa9.09□□□□□ -0.95
AP002001.1-202ENST00000525797 SLAIN2Q9P270 581 aa9.09□□□□□ -0.95
AP002001.1-202ENST00000525797 NUTM2BA6NNL0 878 aaPredicted RBP9.09□□□□□ -0.95
AP002001.1-202ENST00000525797 NUTM2EB1AL46 878 aaPredicted RBP9.09□□□□□ -0.95
AP002001.1-202ENST00000525797 LMOD3Q0VAK6 560 aa9.09□□□□□ -0.95
AP002001.1-202ENST00000525797 NEUROD2Q15784 382 aa9.09□□□□□ -0.95
AP002001.1-202ENST00000525797 NUTM2GQ5VZR2 741 aa9.09□□□□□ -0.95
AP002001.1-202ENST00000525797 DESI1Q6ICB0 168 aa9.09□□□□□ -0.95
AP002001.1-202ENST00000525797 NUTM2AQ8IVF1 878 aaPredicted RBP9.09□□□□□ -0.95
AP002001.1-202ENST00000525797 MYH16Q9H6N6 1097 aa9.09□□□□□ -0.95
AP002001.1-202ENST00000525797 AHDC1Q5TGY3 1603 aaPredicted RBP9.09□□□□□ -0.96
AP002001.1-202ENST00000525797 PLEKHG2Q9H7P9 1386 aa9.09□□□□□ -0.96
AP002001.1-202ENST00000525797 TUSC1Q2TAM9 212 aa9.08□□□□□ -0.96
AP002001.1-202ENST00000525797 SULT6B1Q6IMI4 303 aa9.08□□□□□ -0.96
AP002001.1-202ENST00000525797 AEBP1Q8IUX7 1158 aa9.08□□□□□ -0.96
AP002001.1-202ENST00000525797 CPDO75976 1380 aa9.08□□□□□ -0.96
AP002001.1-202ENST00000525797 XPCQ01831 940 aaPredicted RBP9.07□□□□□ -0.96
AP002001.1-202ENST00000525797 CALD1Q05682 793 aaKnown RBP9.07□□□□□ -0.96
AP002001.1-202ENST00000525797 PTCRAQ6ISU1 281 aaPredicted RBP9.07□□□□□ -0.96
AP002001.1-202ENST00000525797 ROBO1Q9Y6N7 1651 aa9.07□□□□□ -0.96
AP002001.1-202ENST00000525797 COL22A1Q8NFW1 1626 aaPredicted RBP9.07□□□□□ -0.96
AP002001.1-202ENST00000525797 LILRB3O75022 631 aa9.07□□□□□ -0.96
AP002001.1-202ENST00000525797 ZNF853P0CG23 659 aa9.07□□□□□ -0.96
AP002001.1-202ENST00000525797 TSC1Q92574 1164 aa9.07□□□□□ -0.96
AP002001.1-202ENST00000525797 ADAMTS7Q9UKP4 1686 aa9.06□□□□□ -0.96
AP002001.1-202ENST00000525797 CCDC136Q96JN2 1154 aa9.06□□□□□ -0.96
AP002001.1-202ENST00000525797 CACNA1FO60840 1977 aa9.05□□□□□ -0.96
AP002001.1-202ENST00000525797 LCE2BO14633 110 aa9.05□□□□□ -0.96
AP002001.1-202ENST00000525797 PKDCCQ504Y2 493 aa9.05□□□□□ -0.96
AP002001.1-202ENST00000525797 TRAF7Q6Q0C0 670 aa9.05□□□□□ -0.96
AP002001.1-202ENST00000525797 EVA1BQ9NVM1 165 aa9.05□□□□□ -0.96
AP002001.1-202ENST00000525797 IFT57Q9NWB7 429 aa9.05□□□□□ -0.96
AP002001.1-202ENST00000525797 FAM187AA6NFU0 413 aa9.04□□□□□ -0.96
AP002001.1-202ENST00000525797 HTATSF1O43719 755 aaKnown RBP9.04□□□□□ -0.96
AP002001.1-202ENST00000525797 SH3D19Q5HYK7 790 aa9.04□□□□□ -0.96
AP002001.1-202ENST00000525797 LYPD8Q6UX82 237 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms