RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 NARFQ9UHQ1 456 aa8.32□□□□□ -1.08
CD44-214ENST00000525211 RCAN3Q9UKA8 241 aa8.32□□□□□ -1.08
CD44-214ENST00000525211 MAP3K15Q6ZN16 1313 aa8.31□□□□□ -1.08
CD44-214ENST00000525211 UBN2Q6ZU65 1347 aa8.31□□□□□ -1.08
CD44-214ENST00000525211 IGKV5-2P06315 115 aa8.31□□□□□ -1.08
CD44-214ENST00000525211 GPTP24298 496 aa8.31□□□□□ -1.08
CD44-214ENST00000525211 TM4SF1P30408 202 aa8.31□□□□□ -1.08
CD44-214ENST00000525211 ALDH1L2Q3SY69 923 aa8.31□□□□□ -1.08
CD44-214ENST00000525211 BICDL1Q6ZP65 573 aa8.31□□□□□ -1.08
CD44-214ENST00000525211 RYDENQ9NUL5 291 aaKnown RBP8.31□□□□□ -1.08
CD44-214ENST00000525211 HYPKQ9NX55 129 aa8.31□□□□□ -1.08
CD44-214ENST00000525211 MAP3K2Q9Y2U5 619 aa8.31□□□□□ -1.08
CD44-214ENST00000525211 BCORQ6W2J9 1755 aa8.3□□□□□ -1.08
CD44-214ENST00000525211 QSER1Q2KHR3 1735 aa8.3□□□□□ -1.08
CD44-214ENST00000525211 FAM177BA6PVY3 158 aa8.3□□□□□ -1.08
CD44-214ENST00000525211 CT47B1P0C2W7 299 aaPredicted RBP8.3□□□□□ -1.08
CD44-214ENST00000525211 RFC4P35249 363 aa8.3□□□□□ -1.08
CD44-214ENST00000525211 BRPF1P55201 1214 aaPredicted RBP8.3□□□□□ -1.08
CD44-214ENST00000525211 NFIXQ14938 502 aa8.3□□□□□ -1.08
CD44-214ENST00000525211 CWF19L2Q2TBE0 894 aaKnown RBP8.3□□□□□ -1.08
CD44-214ENST00000525211 ANKRD13DQ6ZTN6 518 aa8.3□□□□□ -1.08
CD44-214ENST00000525211 PLBD2Q8NHP8 589 aa8.3□□□□□ -1.08
CD44-214ENST00000525211 FRAT1Q92837 279 aaPredicted RBP8.3□□□□□ -1.08
CD44-214ENST00000525211 CLUAP1Q96AJ1 413 aa8.3□□□□□ -1.08
CD44-214ENST00000525211 PHF12Q96QT6 1004 aa8.3□□□□□ -1.08
CD44-214ENST00000525211 MYD88Q99836 296 aa8.3□□□□□ -1.08
CD44-214ENST00000525211 STK31Q9BXU1 1019 aa8.3□□□□□ -1.08
CD44-214ENST00000525211 SCN7AQ01118 1682 aa8.3□□□□□ -1.08
CD44-214ENST00000525211 TRIM27P14373 513 aa8.29□□□□□ -1.08
CD44-214ENST00000525211 PTGER2P43116 358 aa8.29□□□□□ -1.08
CD44-214ENST00000525211 FKBP5Q13451 457 aaPredicted RBP8.29□□□□□ -1.08
CD44-214ENST00000525211 BEND3Q5T5X7 828 aa8.29□□□□□ -1.08
CD44-214ENST00000525211 SUSD4Q5VX71 490 aa8.29□□□□□ -1.08
CD44-214ENST00000525211 KSR2Q6VAB6 950 aa8.29□□□□□ -1.08
CD44-214ENST00000525211 GIGYF2Q6Y7W6 1299 aaKnown RBP8.29□□□□□ -1.08
CD44-214ENST00000525211 SLC51AQ86UW1 340 aa8.29□□□□□ -1.08
CD44-214ENST00000525211 ZNF34Q8IZ26 560 aa8.29□□□□□ -1.08
CD44-214ENST00000525211 PANK1Q8TE04 598 aa8.29□□□□□ -1.08
CD44-214ENST00000525211 ISCA1Q9BUE6 129 aa8.29□□□□□ -1.08
CD44-214ENST00000525211 METTL22Q9BUU2 404 aaPredicted RBP8.29□□□□□ -1.08
CD44-214ENST00000525211 SUPT16HQ9Y5B9 1047 aaKnown RBP8.29□□□□□ -1.08
CD44-214ENST00000525211 CARMIL3Q8ND23 1372 aa8.29□□□□□ -1.08
CD44-214ENST00000525211 ARFGEF2Q9Y6D5 1785 aa8.29□□□□□ -1.08
CD44-214ENST00000525211 ERVV-1B6SEH8 477 aa8.28□□□□□ -1.08
CD44-214ENST00000525211 POLRMTO00411 1230 aaKnown RBP8.28□□□□□ -1.08
CD44-214ENST00000525211 ZPR1O75312 459 aa8.28□□□□□ -1.08
CD44-214ENST00000525211 MMP10P09238 476 aa8.28□□□□□ -1.08
CD44-214ENST00000525211 TCIRG1Q13488 830 aa8.28□□□□□ -1.08
CD44-214ENST00000525211 RTL5Q5HYW3 569 aaPredicted RBP8.28□□□□□ -1.08
CD44-214ENST00000525211 C3orf67Q6ZVT6 689 aa8.28□□□□□ -1.08
CD44-214ENST00000525211 RIC3Q7Z5B4 369 aa8.28□□□□□ -1.08
CD44-214ENST00000525211 NLRP10Q86W26 655 aa8.28□□□□□ -1.08
CD44-214ENST00000525211 DNAAF4Q8WXU2 420 aa8.28□□□□□ -1.08
CD44-214ENST00000525211 NUP98P52948 1817 aa8.28□□□□□ -1.08
CD44-214ENST00000525211 RNF123Q5XPI4 1314 aa8.28□□□□□ -1.08
CD44-214ENST00000525211 COL4A1P02462 1669 aa8.27□□□□□ -1.08
CD44-214ENST00000525211 ABCC12Q96J65 1359 aa8.27□□□□□ -1.09
CD44-214ENST00000525211 A0A087WZG4 1122 aa8.27□□□□□ -1.09
CD44-214ENST00000525211 NTSR2O95665 410 aa8.27□□□□□ -1.09
CD44-214ENST00000525211 CASP7P55210 303 aa8.27□□□□□ -1.09
CD44-214ENST00000525211 IRX6P78412 446 aaPredicted RBP8.27□□□□□ -1.09
CD44-214ENST00000525211 SLC4A10Q6U841 1118 aa8.27□□□□□ -1.09
CD44-214ENST00000525211 ATF7IPQ6VMQ6 1270 aa8.27□□□□□ -1.09
CD44-214ENST00000525211 KIF6Q6ZMV9 814 aa8.27□□□□□ -1.09
CD44-214ENST00000525211 NUTM1Q86Y26 1132 aa8.27□□□□□ -1.09
CD44-214ENST00000525211 TMEM57Q8N5G2 664 aa8.27□□□□□ -1.09
CD44-214ENST00000525211 NIP7Q9Y221 180 aaKnown RBP eCLIP8.27□□□□□ -1.09
CD44-214ENST00000525211 ATP10DQ9P241 1426 aa8.27□□□□□ -1.09
CD44-214ENST00000525211 ABCC4O15439 1325 aa8.27□□□□□ -1.09
CD44-214ENST00000525211 COL24A1Q17RW2 1714 aa8.26□□□□□ -1.09
CD44-214ENST00000525211 NEURL1BA8MQ27 555 aa8.26□□□□□ -1.09
CD44-214ENST00000525211 RRP1P56182 461 aaKnown RBP8.26□□□□□ -1.09
CD44-214ENST00000525211 ERFEQ4G0M1 354 aa8.26□□□□□ -1.09
CD44-214ENST00000525211 EPHA10Q5JZY3 1008 aa8.26□□□□□ -1.09
CD44-214ENST00000525211 FLAD1Q8NFF5 587 aa8.26□□□□□ -1.09
CD44-214ENST00000525211 KAZALD1Q96I82 304 aa8.26□□□□□ -1.09
CD44-214ENST00000525211 MFRPQ9BY79 579 aa8.26□□□□□ -1.09
CD44-214ENST00000525211 C19orf67A6NJJ6 358 aa8.25□□□□□ -1.09
CD44-214ENST00000525211 SERPINB2P05120 415 aa8.25□□□□□ -1.09
CD44-214ENST00000525211 HCLS1P14317 486 aaPredicted RBP8.25□□□□□ -1.09
CD44-214ENST00000525211 ZKSCAN2Q63HK3 967 aa8.25□□□□□ -1.09
CD44-214ENST00000525211 PRR5LQ6MZQ0 368 aa8.25□□□□□ -1.09
CD44-214ENST00000525211 CLEC4GQ6UXB4 293 aa8.25□□□□□ -1.09
CD44-214ENST00000525211 FAM89AQ96GI7 184 aa8.25□□□□□ -1.09
CD44-214ENST00000525211 MEIS3Q99687 375 aa8.25□□□□□ -1.09
CD44-214ENST00000525211 MTFR1LQ9H019 292 aa8.25□□□□□ -1.09
CD44-214ENST00000525211 PTPRCP08575 1304 aa8.25□□□□□ -1.09
CD44-214ENST00000525211 CACNA1FO60840 1977 aa8.24□□□□□ -1.09
CD44-214ENST00000525211 AFDNP55196 1824 aaKnown RBP8.24□□□□□ -1.09
CD44-214ENST00000525211 H7C1W4 665 aa8.24□□□□□ -1.09
CD44-214ENST00000525211 NBPF7P0C2Y1 421 aaPredicted RBP8.24□□□□□ -1.09
CD44-214ENST00000525211 TRIM28Q13263 835 aaKnown RBP8.24□□□□□ -1.09
CD44-214ENST00000525211 GCKRQ14397 625 aa8.24□□□□□ -1.09
CD44-214ENST00000525211 INTS3Q68E01 1043 aaKnown RBP8.24□□□□□ -1.09
CD44-214ENST00000525211 DZIP1LQ8IYY4 767 aaKnown RBP8.24□□□□□ -1.09
CD44-214ENST00000525211 SLC16A10Q8TF71 515 aa8.24□□□□□ -1.09
CD44-214ENST00000525211 ARHGAP45Q92619 1136 aa8.24□□□□□ -1.09
CD44-214ENST00000525211 SUCLG2Q96I99 432 aa8.24□□□□□ -1.09
CD44-214ENST00000525211 CRBNQ96SW2 442 aa8.24□□□□□ -1.09
CD44-214ENST00000525211 USP44Q9H0E7 712 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms