RNA–Protein interactions for RNA: ENST00000525201.5

TSPAN4-214, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-214ENST00000525201 SUSD4Q5VX71 490 aa22.49■■□□□ 1.19
TSPAN4-214ENST00000525201 FER1L6Q2WGJ9 1857 aa22.49■■□□□ 1.19
TSPAN4-214ENST00000525201 KIF3CO14782 793 aa22.48■■□□□ 1.19
TSPAN4-214ENST00000525201 GRIPAP1Q4V328 841 aa22.48■■□□□ 1.19
TSPAN4-214ENST00000525201 CC2D2BQ6DHV5 1058 aa22.48■■□□□ 1.19
TSPAN4-214ENST00000525201 RTKN2Q8IZC4 609 aa22.48■■□□□ 1.19
TSPAN4-214ENST00000525201 PLBD2Q8NHP8 589 aa22.48■■□□□ 1.19
TSPAN4-214ENST00000525201 NLRP3Q96P20 1036 aa22.48■■□□□ 1.19
TSPAN4-214ENST00000525201 TOMM70O94826 608 aa22.47■■□□□ 1.19
TSPAN4-214ENST00000525201 TCIRG1Q13488 830 aa22.47■■□□□ 1.19
TSPAN4-214ENST00000525201 CCDC184Q52MB2 194 aa22.47■■□□□ 1.19
TSPAN4-214ENST00000525201 DPY19L2Q6NUT2 758 aa22.47■■□□□ 1.19
TSPAN4-214ENST00000525201 RBM17Q96I25 401 aaKnown RBP22.47■■□□□ 1.19
TSPAN4-214ENST00000525201 TMX4Q9H1E5 349 aaPredicted RBP22.47■■□□□ 1.19
TSPAN4-214ENST00000525201 IL16Q14005 1332 aa22.47■■□□□ 1.19
TSPAN4-214ENST00000525201 SLX4Q8IY92 1834 aa22.47■■□□□ 1.19
TSPAN4-214ENST00000525201 GOLGA2Q08379 1002 aa22.46■■□□□ 1.19
TSPAN4-214ENST00000525201 ANKRD13DQ6ZTN6 518 aa22.46■■□□□ 1.19
TSPAN4-214ENST00000525201 HOXA10P31260 410 aaPredicted RBP22.45■■□□□ 1.18
TSPAN4-214ENST00000525201 CCDC30Q5VVM6 783 aa22.45■■□□□ 1.18
TSPAN4-214ENST00000525201 GLTPD2A6NH11 291 aa22.44■■□□□ 1.18
TSPAN4-214ENST00000525201 FKBP4Q02790 459 aaKnown RBP eCLIP22.44■■□□□ 1.182e-6■■■■□ 26.3
TSPAN4-214ENST00000525201 NLRP10Q86W26 655 aa22.44■■□□□ 1.18
TSPAN4-214ENST00000525201 WWC1Q8IX03 1113 aa22.44■■□□□ 1.18
TSPAN4-214ENST00000525201 SH3TC1Q8TE82 1336 aa22.44■■□□□ 1.18
TSPAN4-214ENST00000525201 CRAMP1Q96RY5 1269 aa22.44■■□□□ 1.18
TSPAN4-214ENST00000525201 NMRK2Q9NPI5 230 aa22.44■■□□□ 1.18
TSPAN4-214ENST00000525201 DDX58O95786 925 aaKnown RBP22.43■■□□□ 1.18
TSPAN4-214ENST00000525201 SLC10A5Q5PT55 438 aa22.43■■□□□ 1.18
TSPAN4-214ENST00000525201 C7orf43Q8WVR3 580 aa22.43■■□□□ 1.18
TSPAN4-214ENST00000525201 TRMT112Q9UI30 125 aaKnown RBP22.43■■□□□ 1.18
TSPAN4-214ENST00000525201 HSP90B1P14625 803 aaKnown RBP22.42■■□□□ 1.18
TSPAN4-214ENST00000525201 DICER1Q9UPY3 1922 aaKnown RBP22.41■■□□□ 1.18
TSPAN4-214ENST00000525201 RIC3Q7Z5B4 369 aa22.41■■□□□ 1.18
TSPAN4-214ENST00000525201 RBM46Q8TBY0 533 aaKnown RBP22.41■■□□□ 1.18
TSPAN4-214ENST00000525201 STK31Q9BXU1 1019 aa22.41■■□□□ 1.18
TSPAN4-214ENST00000525201 ELL2O00472 640 aaPredicted RBP22.4■■□□□ 1.18
TSPAN4-214ENST00000525201 CCDC88AQ3V6T2 1871 aa22.39■■□□□ 1.18
TSPAN4-214ENST00000525201 PPEF1O14829 653 aaPredicted RBP22.39■■□□□ 1.17
TSPAN4-214ENST00000525201 VEGFAP15692 232 aaPredicted RBP22.39■■□□□ 1.17
TSPAN4-214ENST00000525201 HSPA6P17066 643 aa22.39■■□□□ 1.17
TSPAN4-214ENST00000525201 PRELPP51888 382 aa22.39■■□□□ 1.17
TSPAN4-214ENST00000525201 WDR63Q8IWG1 891 aa22.39■■□□□ 1.17
TSPAN4-214ENST00000525201 PSMD1Q99460 953 aa22.39■■□□□ 1.17
TSPAN4-214ENST00000525201 FSTL1Q12841 308 aa22.38■■□□□ 1.17
TSPAN4-214ENST00000525201 C8orf58Q8NAV2 365 aa22.38■■□□□ 1.17
TSPAN4-214ENST00000525201 RRAGCQ9HB90 399 aa22.38■■□□□ 1.17
TSPAN4-214ENST00000525201 TRIM28Q13263 835 aaKnown RBP22.37■■□□□ 1.17
TSPAN4-214ENST00000525201 ISCA1Q9BUE6 129 aa22.37■■□□□ 1.17
TSPAN4-214ENST00000525201 TWISTNBQ3B726 338 aaPredicted RBP22.36■■□□□ 1.17
TSPAN4-214ENST00000525201 DDX46Q7L014 1031 aaKnown RBP22.36■■□□□ 1.17
TSPAN4-214ENST00000525201 TMC4Q7Z404 712 aa22.36■■□□□ 1.17
TSPAN4-214ENST00000525201 TSR2Q969E8 191 aaKnown RBP22.36■■□□□ 1.17
TSPAN4-214ENST00000525201 WDR90Q96KV7 1748 aa22.35■■□□□ 1.17
TSPAN4-214ENST00000525201 BBOX1O75936 387 aa22.35■■□□□ 1.17
TSPAN4-214ENST00000525201 IARSP41252 1262 aaKnown RBP22.35■■□□□ 1.17
TSPAN4-214ENST00000525201 FAM9BQ8IZU0 186 aa22.35■■□□□ 1.17
TSPAN4-214ENST00000525201 JDP2Q8WYK2 163 aa22.35■■□□□ 1.17
TSPAN4-214ENST00000525201 SMC1BQ8NDV3 1235 aa22.34■■□□□ 1.17
TSPAN4-214ENST00000525201 SUPT20HQ8NEM7 779 aa22.34■■□□□ 1.17
TSPAN4-214ENST00000525201 MYH16Q9H6N6 1097 aa22.34■■□□□ 1.17
TSPAN4-214ENST00000525201 ZNF277Q9NRM2 450 aaPredicted RBP22.34■■□□□ 1.17
TSPAN4-214ENST00000525201 IQCA1LA6NCM1 817 aa22.33■■□□□ 1.17
TSPAN4-214ENST00000525201 HCLS1P14317 486 aaPredicted RBP22.33■■□□□ 1.17
TSPAN4-214ENST00000525201 APLP1P51693 650 aa22.33■■□□□ 1.17
TSPAN4-214ENST00000525201 SYNE4Q8N205 404 aa22.33■■□□□ 1.17
TSPAN4-214ENST00000525201 VPS33BQ9H267 617 aa22.33■■□□□ 1.17
TSPAN4-214ENST00000525201 PHAXQ9H814 394 aaKnown RBP22.33■■□□□ 1.17
TSPAN4-214ENST00000525201 ATP6V0A2Q9Y487 856 aa22.33■■□□□ 1.17
TSPAN4-214ENST00000525201 ABCC4O15439 1325 aa22.32■■□□□ 1.16
TSPAN4-214ENST00000525201 ATP5J2-PTCD1G3V325 749 aa22.32■■□□□ 1.16
TSPAN4-214ENST00000525201 NEXNQ0ZGT2 675 aa22.32■■□□□ 1.16
TSPAN4-214ENST00000525201 CCDC191Q8NCU4 936 aa22.32■■□□□ 1.16
TSPAN4-214ENST00000525201 FANCIQ9NVI1 1328 aa22.31■■□□□ 1.16
TSPAN4-214ENST00000525201 SNED1Q8TER0 1413 aa22.31■■□□□ 1.16
TSPAN4-214ENST00000525201 GRAPQ13588 217 aa22.31■■□□□ 1.16
TSPAN4-214ENST00000525201 C3orf67Q6ZVT6 689 aa22.31■■□□□ 1.16
TSPAN4-214ENST00000525201 TSPYL6Q8N831 410 aa22.31■■□□□ 1.16
TSPAN4-214ENST00000525201 ZBTB38Q8NAP3 1195 aaPredicted RBP22.31■■□□□ 1.16
TSPAN4-214ENST00000525201 GRAPLQ8TC17 118 aaPredicted RBP22.31■■□□□ 1.16
TSPAN4-214ENST00000525201 CEP350Q5VT06 3117 aa22.31■■□□□ 1.16
TSPAN4-214ENST00000525201 LAMB2P55268 1798 aa22.3■■□□□ 1.16
TSPAN4-214ENST00000525201 IFFO2Q5TF58 517 aa22.3■■□□□ 1.16
TSPAN4-214ENST00000525201 OLFM4Q6UX06 510 aa22.3■■□□□ 1.16
TSPAN4-214ENST00000525201 FAM89AQ96GI7 184 aa22.3■■□□□ 1.16
TSPAN4-214ENST00000525201 MYD88Q99836 296 aa22.3■■□□□ 1.16
TSPAN4-214ENST00000525201 METTL22Q9BUU2 404 aaPredicted RBP22.3■■□□□ 1.16
TSPAN4-214ENST00000525201 KSR2Q6VAB6 950 aa22.29■■□□□ 1.16
TSPAN4-214ENST00000525201 SP8Q8IXZ3 490 aa22.29■■□□□ 1.16
TSPAN4-214ENST00000525201 CWC25Q9NXE8 425 aaPredicted RBP22.29■■□□□ 1.16
TSPAN4-214ENST00000525201 SALL2Q9Y467 1007 aaPredicted RBP22.29■■□□□ 1.16
TSPAN4-214ENST00000525201 DDX60Q8IY21 1712 aaKnown RBP22.28■■□□□ 1.16
TSPAN4-214ENST00000525201 IRS4O14654 1257 aaPredicted RBP22.28■■□□□ 1.16
TSPAN4-214ENST00000525201 EIF6P56537 245 aaKnown RBP22.28■■□□□ 1.16
TSPAN4-214ENST00000525201 SF3B3Q15393 1217 aaKnown RBP22.28■■□□□ 1.16
TSPAN4-214ENST00000525201 LARGE2Q8N3Y3 721 aa22.28■■□□□ 1.16
TSPAN4-214ENST00000525201 L3MBTL3Q96JM7 780 aaPredicted RBP22.28■■□□□ 1.16
TSPAN4-214ENST00000525201 TCERG1O14776 1098 aaKnown RBP22.27■■□□□ 1.16
TSPAN4-214ENST00000525201 DDNO94850 711 aaPredicted RBP22.27■■□□□ 1.16
TSPAN4-214ENST00000525201 DPP8Q6V1X1 898 aaPredicted RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms