RNA–Protein interactions for RNA: ENST00000524657.1

KDM2A-204, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best)

Gene KDM2A, Length 3,692 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-204ENST00000524657 SFPQP23246 707 aaKnown RBP eCLIP11.42□□□□□ -0.58
KDM2A-204ENST00000524657 RNF20Q5VTR2 975 aa11.42□□□□□ -0.58
KDM2A-204ENST00000524657 CNTROBQ8N137 903 aa11.42□□□□□ -0.58
KDM2A-204ENST00000524657 STK31Q9BXU1 1019 aa11.42□□□□□ -0.58
KDM2A-204ENST00000524657 COL3A1P02461 1466 aaPredicted RBP11.42□□□□□ -0.58
KDM2A-204ENST00000524657 NEMFO60524 1076 aa11.42□□□□□ -0.58
KDM2A-204ENST00000524657 IL13P35225 146 aa11.42□□□□□ -0.58
KDM2A-204ENST00000524657 EVCP57679 992 aa11.42□□□□□ -0.58
KDM2A-204ENST00000524657 IQCB1Q15051 598 aa11.42□□□□□ -0.58
KDM2A-204ENST00000524657 CWC15Q9P013 229 aaKnown RBP11.42□□□□□ -0.58
KDM2A-204ENST00000524657 PREX2Q70Z35 1606 aa11.42□□□□□ -0.58
KDM2A-204ENST00000524657 FOXO3O43524 673 aa11.41□□□□□ -0.58
KDM2A-204ENST00000524657 ZKSCAN1P17029 563 aaPredicted RBP11.41□□□□□ -0.58
KDM2A-204ENST00000524657 CCT4P50991 539 aaKnown RBP11.41□□□□□ -0.58
KDM2A-204ENST00000524657 MCM6Q14566 821 aa11.41□□□□□ -0.58
KDM2A-204ENST00000524657 IFNKQ9P0W0 207 aa11.41□□□□□ -0.58
KDM2A-204ENST00000524657 ORC3Q9UBD5 711 aaPredicted RBP11.41□□□□□ -0.58
KDM2A-204ENST00000524657 REREQ9P2R6 1566 aa11.41□□□□□ -0.58
KDM2A-204ENST00000524657 PHACTR2O75167 634 aa11.41□□□□□ -0.58
KDM2A-204ENST00000524657 SDF4Q9BRK5 362 aa11.41□□□□□ -0.58
KDM2A-204ENST00000524657 SALL3Q9BXA9 1300 aa11.41□□□□□ -0.58
KDM2A-204ENST00000524657 HSP90B1P14625 803 aaKnown RBP11.41□□□□□ -0.58
KDM2A-204ENST00000524657 ATP8B2P98198 1209 aa11.41□□□□□ -0.58
KDM2A-204ENST00000524657 GUCY1B3Q02153 619 aa11.41□□□□□ -0.58
KDM2A-204ENST00000524657 CCAR1Q8IX12 1150 aaKnown RBP11.41□□□□□ -0.58
KDM2A-204ENST00000524657 NOP2P46087 812 aaKnown RBP11.4□□□□□ -0.58
KDM2A-204ENST00000524657 FOXR1Q6PIV2 292 aa11.4□□□□□ -0.58
KDM2A-204ENST00000524657 MRFAP1L1Q96HT8 127 aa11.4□□□□□ -0.58
KDM2A-204ENST00000524657 ZSCAN31Q96LW9 406 aaPredicted RBP11.4□□□□□ -0.58
KDM2A-204ENST00000524657 AK7Q96M32 723 aa11.4□□□□□ -0.58
KDM2A-204ENST00000524657 SIL1Q9H173 461 aa11.4□□□□□ -0.58
KDM2A-204ENST00000524657 EFCC1Q9HA90 598 aa11.4□□□□□ -0.58
KDM2A-204ENST00000524657 SH2B1Q9NRF2 756 aaPredicted RBP11.4□□□□□ -0.58
KDM2A-204ENST00000524657 PPP6R1Q9UPN7 881 aa11.4□□□□□ -0.58
KDM2A-204ENST00000524657 KINO60870 393 aaKnown RBP11.4□□□□□ -0.58
KDM2A-204ENST00000524657 GNAI3P08754 354 aa11.4□□□□□ -0.58
KDM2A-204ENST00000524657 UBTFL1P0CB47 393 aaPredicted RBP11.4□□□□□ -0.58
KDM2A-204ENST00000524657 STX1AQ16623 288 aa11.4□□□□□ -0.58
KDM2A-204ENST00000524657 LMOD2Q6P5Q4 547 aa11.4□□□□□ -0.58
KDM2A-204ENST00000524657 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.4□□□□□ -0.58
KDM2A-204ENST00000524657 PRR29P0C7W0 189 aa11.4□□□□□ -0.58
KDM2A-204ENST00000524657 HAP1P54257 671 aaPredicted RBP11.4□□□□□ -0.58
KDM2A-204ENST00000524657 EP400NLQ6ZTU2 488 aa11.4□□□□□ -0.58
KDM2A-204ENST00000524657 PPP1R42Q7Z4L9 355 aa11.4□□□□□ -0.58
KDM2A-204ENST00000524657 GOLGA6L1Q8N7Z2 621 aa11.4□□□□□ -0.58
KDM2A-204ENST00000524657 LRRC2Q9BYS8 371 aa11.4□□□□□ -0.58
KDM2A-204ENST00000524657 XPO4Q9C0E2 1151 aaKnown RBP11.4□□□□□ -0.58
KDM2A-204ENST00000524657 VPS18Q9P253 973 aa11.4□□□□□ -0.58
KDM2A-204ENST00000524657 SRGAP3O43295 1099 aa11.39□□□□□ -0.59
KDM2A-204ENST00000524657 NRDCO43847 1150 aa11.39□□□□□ -0.59
KDM2A-204ENST00000524657 PDCP20941 246 aa11.39□□□□□ -0.59
KDM2A-204ENST00000524657 HSP90AA4PQ58FG1 418 aa11.39□□□□□ -0.59
KDM2A-204ENST00000524657 VPS53Q5VIR6 699 aa11.39□□□□□ -0.59
KDM2A-204ENST00000524657 ICE2Q659A1 982 aa11.39□□□□□ -0.59
KDM2A-204ENST00000524657 CCDC73Q6ZRK6 1079 aa11.39□□□□□ -0.59
KDM2A-204ENST00000524657 TEX2Q8IWB9 1127 aa11.39□□□□□ -0.59
KDM2A-204ENST00000524657 ADAM21Q9UKJ8 722 aa11.39□□□□□ -0.59
KDM2A-204ENST00000524657 KIF2AO00139 706 aaPredicted RBP11.39□□□□□ -0.59
KDM2A-204ENST00000524657 VGFO15240 615 aaPredicted RBP11.39□□□□□ -0.59
KDM2A-204ENST00000524657 LEKR1Q6ZMV7 388 aa11.39□□□□□ -0.59
KDM2A-204ENST00000524657 CREBRFQ8IUR6 639 aa11.39□□□□□ -0.59
KDM2A-204ENST00000524657 RHPN1Q8TCX5 695 aa11.39□□□□□ -0.59
KDM2A-204ENST00000524657 BRF1Q92994 677 aa11.39□□□□□ -0.59
KDM2A-204ENST00000524657 TAF6LQ9Y6J9 622 aa11.39□□□□□ -0.59
KDM2A-204ENST00000524657 KIF24Q5T7B8 1368 aa11.39□□□□□ -0.59
KDM2A-204ENST00000524657 ARMCX5Q6P1M9 558 aa11.39□□□□□ -0.59
KDM2A-204ENST00000524657 CEP57L1Q8IYX8 460 aa11.39□□□□□ -0.59
KDM2A-204ENST00000524657 RBM8AQ9Y5S9 174 aaKnown RBP11.39□□□□□ -0.59
KDM2A-204ENST00000524657 MRC2Q9UBG0 1479 aa11.38□□□□□ -0.59
KDM2A-204ENST00000524657 PLCH2O75038 1416 aa11.38□□□□□ -0.59
KDM2A-204ENST00000524657 ZRANB2O95218 330 aaKnown RBP eCLIP11.38□□□□□ -0.59
KDM2A-204ENST00000524657 TBC1D8O95759 1140 aa11.38□□□□□ -0.59
KDM2A-204ENST00000524657 LMOD1P29536 600 aaPredicted RBP11.38□□□□□ -0.59
KDM2A-204ENST00000524657 ME1P48163 572 aa11.38□□□□□ -0.59
KDM2A-204ENST00000524657 SRLQ86TD4 932 aa11.38□□□□□ -0.59
KDM2A-204ENST00000524657 UTP14AQ9BVJ6 771 aaKnown RBP11.38□□□□□ -0.59
KDM2A-204ENST00000524657 MYOM2P54296 1465 aa11.38□□□□□ -0.59
KDM2A-204ENST00000524657 NCKAP5LQ9HCH0 1330 aa11.38□□□□□ -0.59
KDM2A-204ENST00000524657 CHL1O00533 1208 aa11.38□□□□□ -0.59
KDM2A-204ENST00000524657 WAPLQ7Z5K2 1190 aa11.38□□□□□ -0.59
KDM2A-204ENST00000524657 L2HGDHQ9H9P8 463 aa11.38□□□□□ -0.59
KDM2A-204ENST00000524657 STAP2Q9UGK3 403 aa11.38□□□□□ -0.59
KDM2A-204ENST00000524657 CCDC9Q9Y3X0 531 aaKnown RBP11.38□□□□□ -0.59
KDM2A-204ENST00000524657 JRKLQ9Y4A0 524 aa11.38□□□□□ -0.59
KDM2A-204ENST00000524657 QRICH2Q9H0J4 1663 aa11.38□□□□□ -0.59
KDM2A-204ENST00000524657 SSH2Q76I76 1423 aa11.38□□□□□ -0.59
KDM2A-204ENST00000524657 TULP4Q9NRJ4 1543 aa11.38□□□□□ -0.59
KDM2A-204ENST00000524657 CDC25BP30305 580 aa11.38□□□□□ -0.59
KDM2A-204ENST00000524657 ETF1P62495 437 aaKnown RBP11.38□□□□□ -0.59
KDM2A-204ENST00000524657 FLIIQ13045 1269 aa11.38□□□□□ -0.59
KDM2A-204ENST00000524657 TTC31Q49AM3 519 aaPredicted RBP11.38□□□□□ -0.59
KDM2A-204ENST00000524657 DHX40Q8IX18 779 aaKnown RBP11.38□□□□□ -0.59
KDM2A-204ENST00000524657 FAM227BQ96M60 508 aa11.38□□□□□ -0.59
KDM2A-204ENST00000524657 ARFGAP3Q9NP61 516 aa11.38□□□□□ -0.59
KDM2A-204ENST00000524657 PNPLA6Q8IY17 1366 aa11.38□□□□□ -0.59
KDM2A-204ENST00000524657 BLOC1S2Q6QNY1 142 aa11.37□□□□□ -0.59
KDM2A-204ENST00000524657 PI4K2BQ8TCG2 481 aa11.37□□□□□ -0.59
KDM2A-204ENST00000524657 WWC2Q6AWC2 1192 aa11.37□□□□□ -0.59
KDM2A-204ENST00000524657 FSIP1Q8NA03 581 aa11.37□□□□□ -0.59
KDM2A-204ENST00000524657 GOLPH3LQ9H4A5 285 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms