RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 CCDC171Q6TFL3 1326 aa9.95□□□□□ -0.82
CHD7-202ENST00000524602 GADD45BO75293 160 aaPredicted RBP9.95□□□□□ -0.82
CHD7-202ENST00000524602 PSMA5P28066 241 aa9.95□□□□□ -0.82
CHD7-202ENST00000524602 NECTIN1Q15223 517 aa9.95□□□□□ -0.82
CHD7-202ENST00000524602 ALDH8A1Q9H2A2 487 aaPredicted RBP9.95□□□□□ -0.82
CHD7-202ENST00000524602 SCN11AQ9UI33 1791 aa9.95□□□□□ -0.82
CHD7-202ENST00000524602 AXIN2Q9Y2T1 843 aa9.94□□□□□ -0.82
CHD7-202ENST00000524602 STRCQ7RTU9 1775 aa9.94□□□□□ -0.82
CHD7-202ENST00000524602 G3BP1Q13283 466 aaKnown RBP eCLIP9.94□□□□□ -0.823e-6■■□□□ 12.2
CHD7-202ENST00000524602 AACSQ86V21 672 aa9.94□□□□□ -0.82
CHD7-202ENST00000524602 ANKRD24Q8TF21 1146 aa9.94□□□□□ -0.82
CHD7-202ENST00000524602 JAKMIP1Q96N16 626 aaKnown RBP9.94□□□□□ -0.82
CHD7-202ENST00000524602 PTH1RQ03431 593 aa9.94□□□□□ -0.82
CHD7-202ENST00000524602 ANKRD1Q15327 319 aa9.94□□□□□ -0.82
CHD7-202ENST00000524602 MAP4K1Q92918 833 aa9.94□□□□□ -0.82
CHD7-202ENST00000524602 CNPY2Q9Y2B0 182 aa9.94□□□□□ -0.82
CHD7-202ENST00000524602 ANXA1P04083 346 aa9.93□□□□□ -0.82
CHD7-202ENST00000524602 RNF20Q5VTR2 975 aa9.93□□□□□ -0.82
CHD7-202ENST00000524602 PRPF40BQ6NWY9 871 aaKnown RBP9.93□□□□□ -0.82
CHD7-202ENST00000524602 JCADQ9P266 1359 aa9.93□□□□□ -0.82
CHD7-202ENST00000524602 GJB2P29033 226 aa9.93□□□□□ -0.82
CHD7-202ENST00000524602 ZC3H6P61129 1189 aaKnown RBP9.93□□□□□ -0.82
CHD7-202ENST00000524602 LARP1Q6PKG0 1096 aaKnown RBP9.93□□□□□ -0.82
CHD7-202ENST00000524602 CADPS2Q86UW7 1296 aa9.93□□□□□ -0.82
CHD7-202ENST00000524602 RNF214Q8ND24 703 aa9.93□□□□□ -0.82
CHD7-202ENST00000524602 GDPD2Q9HCC8 539 aa9.93□□□□□ -0.82
CHD7-202ENST00000524602 KDM4FA0A1W2PPD8 638 aa9.92□□□□□ -0.82
CHD7-202ENST00000524602 PDCP20941 246 aa9.92□□□□□ -0.82
CHD7-202ENST00000524602 PROSER3Q2NL68 480 aa9.92□□□□□ -0.82
CHD7-202ENST00000524602 HMG20BQ9P0W2 317 aa9.92□□□□□ -0.82
CHD7-202ENST00000524602 COL15A1P39059 1388 aa9.92□□□□□ -0.82
CHD7-202ENST00000524602 RFX7Q2KHR2 1363 aa9.92□□□□□ -0.82
CHD7-202ENST00000524602 C5P01031 1676 aa9.92□□□□□ -0.82
CHD7-202ENST00000524602 CWF19L2Q2TBE0 894 aaKnown RBP9.92□□□□□ -0.82
CHD7-202ENST00000524602 CREB3L3Q68CJ9 461 aa9.92□□□□□ -0.82
CHD7-202ENST00000524602 SUCLG2Q96I99 432 aa9.92□□□□□ -0.82
CHD7-202ENST00000524602 MTMR6Q9Y217 621 aa9.92□□□□□ -0.82
CHD7-202ENST00000524602 RBM8AQ9Y5S9 174 aaKnown RBP9.92□□□□□ -0.82
CHD7-202ENST00000524602 SASH1O94885 1247 aa9.92□□□□□ -0.82
CHD7-202ENST00000524602 NEXNQ0ZGT2 675 aa9.92□□□□□ -0.82
CHD7-202ENST00000524602 TSGA10IPQ3SY00 556 aa9.92□□□□□ -0.82
CHD7-202ENST00000524602 BICC1Q9H694 974 aaKnown RBP9.92□□□□□ -0.82
CHD7-202ENST00000524602 PA2G4Q9UQ80 394 aaKnown RBP9.92□□□□□ -0.82
CHD7-202ENST00000524602 MED23Q9ULK4 1368 aa9.91□□□□□ -0.82
CHD7-202ENST00000524602 PTMAP06454 111 aaKnown RBP9.91□□□□□ -0.82
CHD7-202ENST00000524602 ADCK5Q3MIX3 580 aa9.91□□□□□ -0.82
CHD7-202ENST00000524602 CCDC83Q8IWF9 413 aa9.91□□□□□ -0.82
CHD7-202ENST00000524602 KAZALD1Q96I82 304 aa9.91□□□□□ -0.82
CHD7-202ENST00000524602 LARGE1O95461 756 aa9.91□□□□□ -0.82
CHD7-202ENST00000524602 KIAA2012Q0VF49 1180 aa9.91□□□□□ -0.82
CHD7-202ENST00000524602 PDIA6Q15084 440 aa9.91□□□□□ -0.82
CHD7-202ENST00000524602 ELP1O95163 1332 aa9.91□□□□□ -0.82
CHD7-202ENST00000524602 NPHP3Q7Z494 1330 aa9.91□□□□□ -0.82
CHD7-202ENST00000524602 FOXD4L6Q3SYB3 417 aaPredicted RBP9.91□□□□□ -0.82
CHD7-202ENST00000524602 FOXD4L3Q6VB84 417 aaPredicted RBP9.91□□□□□ -0.82
CHD7-202ENST00000524602 EAF2Q96CJ1 260 aaPredicted RBP9.91□□□□□ -0.82
CHD7-202ENST00000524602 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.91□□□□□ -0.829e-7■■■□□ 18.9
CHD7-202ENST00000524602 ERBB3P21860 1342 aa9.9□□□□□ -0.82
CHD7-202ENST00000524602 SLC27A2O14975 620 aa9.9□□□□□ -0.82
CHD7-202ENST00000524602 KCNJ4P48050 445 aa9.9□□□□□ -0.82
CHD7-202ENST00000524602 NMIQ13287 307 aaPredicted RBP9.9□□□□□ -0.82
CHD7-202ENST00000524602 CABLES1Q8TDN4 633 aa9.9□□□□□ -0.82
CHD7-202ENST00000524602 TNS3Q68CZ2 1445 aa9.9□□□□□ -0.82
CHD7-202ENST00000524602 ME3Q16798 604 aa9.9□□□□□ -0.82
CHD7-202ENST00000524602 ZNF790Q6PG37 636 aa9.9□□□□□ -0.82
CHD7-202ENST00000524602 RIC3Q7Z5B4 369 aa9.9□□□□□ -0.82
CHD7-202ENST00000524602 PDCL3Q9H2J4 239 aa9.9□□□□□ -0.82
CHD7-202ENST00000524602 COL18A1P39060 1754 aa9.9□□□□□ -0.83
CHD7-202ENST00000524602 NEURL1BA8MQ27 555 aa9.9□□□□□ -0.83
CHD7-202ENST00000524602 KRT32Q14532 448 aa9.9□□□□□ -0.83
CHD7-202ENST00000524602 TICAM2Q86XR7 235 aa9.9□□□□□ -0.83
CHD7-202ENST00000524602 MAP7D2Q96T17 732 aa9.9□□□□□ -0.83
CHD7-202ENST00000524602 FUCA2Q9BTY2 467 aa9.9□□□□□ -0.83
CHD7-202ENST00000524602 SLC52A2Q9HAB3 445 aa9.9□□□□□ -0.83
CHD7-202ENST00000524602 FIBPO43427 364 aa9.89□□□□□ -0.83
CHD7-202ENST00000524602 IGKV5-2P06315 115 aa9.89□□□□□ -0.83
CHD7-202ENST00000524602 CPA1P15085 419 aa9.89□□□□□ -0.83
CHD7-202ENST00000524602 BLOC1S2Q6QNY1 142 aa9.89□□□□□ -0.83
CHD7-202ENST00000524602 FSD1Q9BTV5 496 aa9.89□□□□□ -0.83
CHD7-202ENST00000524602 METTL22Q9BUU2 404 aaPredicted RBP9.89□□□□□ -0.83
CHD7-202ENST00000524602 AFDNP55196 1824 aaKnown RBP9.89□□□□□ -0.83
CHD7-202ENST00000524602 TPM3P06753 285 aa9.89□□□□□ -0.83
CHD7-202ENST00000524602 KRT85P78386 507 aa9.89□□□□□ -0.83
CHD7-202ENST00000524602 GCKRQ14397 625 aa9.89□□□□□ -0.83
CHD7-202ENST00000524602 FAM227BQ96M60 508 aa9.89□□□□□ -0.83
CHD7-202ENST00000524602 COPRSQ9NQ92 184 aa9.89□□□□□ -0.83
CHD7-202ENST00000524602 TPCN1Q9ULQ1 816 aa9.89□□□□□ -0.83
CHD7-202ENST00000524602 R3HCC1Q9Y3T6 440 aaKnown RBP9.89□□□□□ -0.83
CHD7-202ENST00000524602 RPS6KB1P23443 525 aa9.88□□□□□ -0.83
CHD7-202ENST00000524602 DNM1Q05193 864 aaKnown RBP9.88□□□□□ -0.83
CHD7-202ENST00000524602 ST3GAL1Q11201 340 aa9.88□□□□□ -0.83
CHD7-202ENST00000524602 USPL1Q5W0Q7 1092 aa9.88□□□□□ -0.83
CHD7-202ENST00000524602 SASS6Q6UVJ0 657 aa9.88□□□□□ -0.83
CHD7-202ENST00000524602 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.88□□□□□ -0.83
CHD7-202ENST00000524602 LAMB4A4D0S4 1761 aa9.88□□□□□ -0.83
CHD7-202ENST00000524602 KDM6AO15550 1401 aaPredicted RBP9.88□□□□□ -0.83
CHD7-202ENST00000524602 PRAMEF22A3QJZ6 481 aa9.88□□□□□ -0.83
CHD7-202ENST00000524602 KDM4AO75164 1064 aa9.88□□□□□ -0.83
CHD7-202ENST00000524602 ATP5JP18859 108 aa9.88□□□□□ -0.83
CHD7-202ENST00000524602 LARP1BQ659C4 914 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms