RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 RWDD1Q9H446 243 aaPredicted RBP9.56□□□□□ -0.88
CTR9-202ENST00000524523 CRB1P82279 1406 aa9.56□□□□□ -0.88
CTR9-202ENST00000524523 TRIM27P14373 513 aa9.55□□□□□ -0.88
CTR9-202ENST00000524523 DIXDC1Q155Q3 683 aa9.55□□□□□ -0.88
CTR9-202ENST00000524523 MTHFSDQ2M296 383 aaKnown RBP9.55□□□□□ -0.88
CTR9-202ENST00000524523 SLC6A16Q9GZN6 736 aa9.55□□□□□ -0.88
CTR9-202ENST00000524523 HOXB7P09629 217 aa9.54□□□□□ -0.88
CTR9-202ENST00000524523 HDAC1Q13547 482 aaPredicted RBP9.54□□□□□ -0.88
CTR9-202ENST00000524523 TAF7Q15545 349 aaPredicted RBP9.54□□□□□ -0.88
CTR9-202ENST00000524523 PLEKHO1Q53GL0 409 aaPredicted RBP9.54□□□□□ -0.88
CTR9-202ENST00000524523 THAP11Q96EK4 314 aa9.54□□□□□ -0.88
CTR9-202ENST00000524523 NOB1Q9ULX3 412 aaKnown RBP9.54□□□□□ -0.88
CTR9-202ENST00000524523 COG6Q9Y2V7 657 aa9.54□□□□□ -0.88
CTR9-202ENST00000524523 OVOS2A0A0G2JMS6 1433 aa9.54□□□□□ -0.88
CTR9-202ENST00000524523 PTPRCP08575 1304 aa9.54□□□□□ -0.88
CTR9-202ENST00000524523 CPDO75976 1380 aa9.53□□□□□ -0.88
CTR9-202ENST00000524523 S1PR4O95977 384 aa9.53□□□□□ -0.88
CTR9-202ENST00000524523 BRICD5Q6PL45 260 aa9.53□□□□□ -0.88
CTR9-202ENST00000524523 PANK1Q8TE04 598 aa9.53□□□□□ -0.88
CTR9-202ENST00000524523 SPIRE2Q8WWL2 714 aa9.53□□□□□ -0.88
CTR9-202ENST00000524523 ZBTB40Q9NUA8 1239 aa9.53□□□□□ -0.88
CTR9-202ENST00000524523 MARF1Q9Y4F3 1742 aaKnown RBP9.53□□□□□ -0.88
CTR9-202ENST00000524523 SPATA31A3Q5VYP0 1347 aa9.53□□□□□ -0.88
CTR9-202ENST00000524523 CEMIPQ8WUJ3 1361 aa9.52□□□□□ -0.88
CTR9-202ENST00000524523 MAP3K5Q99683 1374 aa9.52□□□□□ -0.88
CTR9-202ENST00000524523 RLBP1P12271 317 aa9.52□□□□□ -0.89
CTR9-202ENST00000524523 AKAP4Q5JQC9 854 aa9.52□□□□□ -0.89
CTR9-202ENST00000524523 NBPF6Q5VWK0 638 aa9.52□□□□□ -0.89
CTR9-202ENST00000524523 NUTM2GQ5VZR2 741 aa9.52□□□□□ -0.89
CTR9-202ENST00000524523 C8orf58Q8NAV2 365 aa9.52□□□□□ -0.89
CTR9-202ENST00000524523 NBPF4Q96M43 638 aa9.52□□□□□ -0.89
CTR9-202ENST00000524523 TRPM3Q9HCF6 1732 aaPredicted RBP9.52□□□□□ -0.89
CTR9-202ENST00000524523 SLAIN2Q9P270 581 aa9.52□□□□□ -0.89
CTR9-202ENST00000524523 LAS1LQ9Y4W2 734 aaKnown RBP9.52□□□□□ -0.89
CTR9-202ENST00000524523 SOS2Q07890 1332 aaPredicted RBP9.52□□□□□ -0.89
CTR9-202ENST00000524523 TNS3Q68CZ2 1445 aa9.51□□□□□ -0.89
CTR9-202ENST00000524523 RNF223E7ERA6 249 aa9.51□□□□□ -0.89
CTR9-202ENST00000524523 HSPA2P54652 639 aa9.51□□□□□ -0.89
CTR9-202ENST00000524523 INTS3Q68E01 1043 aaKnown RBP9.51□□□□□ -0.89
CTR9-202ENST00000524523 HLA-CQ95604 372 aa9.51□□□□□ -0.89
CTR9-202ENST00000524523 ARXQ96QS3 562 aa9.51□□□□□ -0.89
CTR9-202ENST00000524523 ABCC4O15439 1325 aa9.51□□□□□ -0.89
CTR9-202ENST00000524523 FAM83GA6ND36 823 aa9.5□□□□□ -0.89
CTR9-202ENST00000524523 ZBTB7BO15156 539 aaPredicted RBP9.5□□□□□ -0.89
CTR9-202ENST00000524523 RNF19BQ6ZMZ0 732 aa9.5□□□□□ -0.89
CTR9-202ENST00000524523 TSPYL6Q8N831 410 aa9.5□□□□□ -0.89
CTR9-202ENST00000524523 THUMPD2Q9BTF0 503 aaKnown RBP9.5□□□□□ -0.89
CTR9-202ENST00000524523 BACH2Q9BYV9 841 aa9.5□□□□□ -0.89
CTR9-202ENST00000524523 TSPYL4Q9UJ04 414 aa9.5□□□□□ -0.89
CTR9-202ENST00000524523 ALS2Q96Q42 1657 aa9.49□□□□□ -0.89
CTR9-202ENST00000524523 PXDNQ92626 1479 aa9.49□□□□□ -0.89
CTR9-202ENST00000524523 FDX1P10109 184 aa9.49□□□□□ -0.89
CTR9-202ENST00000524523 GUCA2AQ02747 115 aa9.49□□□□□ -0.89
CTR9-202ENST00000524523 CCDC30Q5VVM6 783 aa9.49□□□□□ -0.89
CTR9-202ENST00000524523 BRINP3Q76B58 766 aa9.49□□□□□ -0.89
CTR9-202ENST00000524523 MCM10Q7L590 875 aa9.49□□□□□ -0.89
CTR9-202ENST00000524523 ANKLE1Q8NAG6 615 aa9.49□□□□□ -0.89
CTR9-202ENST00000524523 IL17REQ8NFR9 667 aa9.49□□□□□ -0.89
CTR9-202ENST00000524523 ANKRD24Q8TF21 1146 aa9.49□□□□□ -0.89
CTR9-202ENST00000524523 BCL2L13Q9BXK5 485 aa9.49□□□□□ -0.89
CTR9-202ENST00000524523 TBC1D2Q9BYX2 928 aa9.49□□□□□ -0.89
CTR9-202ENST00000524523 MED1Q15648 1581 aaPredicted RBP9.49□□□□□ -0.89
CTR9-202ENST00000524523 IGHDP01880 384 aa9.48□□□□□ -0.89
CTR9-202ENST00000524523 DCTN1Q14203 1278 aa9.48□□□□□ -0.89
CTR9-202ENST00000524523 MSS51Q4VC12 460 aa9.48□□□□□ -0.89
CTR9-202ENST00000524523 ITPRIPQ8IWB1 547 aa9.48□□□□□ -0.89
CTR9-202ENST00000524523 SMC5Q8IY18 1101 aa9.48□□□□□ -0.89
CTR9-202ENST00000524523 FAM160A2Q8N612 972 aaPredicted RBP9.48□□□□□ -0.89
CTR9-202ENST00000524523 USB1Q9BQ65 265 aaKnown RBP9.48□□□□□ -0.89
CTR9-202ENST00000524523 PRKD2Q9BZL6 878 aa9.48□□□□□ -0.89
CTR9-202ENST00000524523 PCDHB15Q9Y5E8 787 aa9.48□□□□□ -0.89
CTR9-202ENST00000524523 STRCQ7RTU9 1775 aa9.47□□□□□ -0.89
CTR9-202ENST00000524523 MOXD2PA6NHM9 499 aa9.47□□□□□ -0.89
CTR9-202ENST00000524523 PPEF1O14829 653 aaPredicted RBP9.47□□□□□ -0.89
CTR9-202ENST00000524523 HSP90AB1P08238 724 aaKnown RBP9.47□□□□□ -0.89
CTR9-202ENST00000524523 NDUFV2P19404 249 aa9.47□□□□□ -0.89
CTR9-202ENST00000524523 C1orf141Q5JVX7 400 aa9.47□□□□□ -0.89
CTR9-202ENST00000524523 TMEM57Q8N5G2 664 aa9.47□□□□□ -0.89
CTR9-202ENST00000524523 GCC1Q96CN9 775 aa9.47□□□□□ -0.89
CTR9-202ENST00000524523 STK31Q9BXU1 1019 aa9.47□□□□□ -0.89
CTR9-202ENST00000524523 SPG7Q9UQ90 795 aa9.47□□□□□ -0.89
CTR9-202ENST00000524523 V9GY48 417 aaPredicted RBP9.47□□□□□ -0.89
CTR9-202ENST00000524523 STRCP1A6NGW2 1772 aa9.47□□□□□ -0.89
CTR9-202ENST00000524523 DLG5Q8TDM6 1919 aa9.46□□□□□ -0.89
CTR9-202ENST00000524523 CAMTA1Q9Y6Y1 1673 aa9.46□□□□□ -0.89
CTR9-202ENST00000524523 EIF5BO60841 1220 aaKnown RBP9.46□□□□□ -0.9
CTR9-202ENST00000524523 CCT4P50991 539 aaKnown RBP9.46□□□□□ -0.9
CTR9-202ENST00000524523 RPAP2Q8IXW5 612 aaPredicted RBP9.46□□□□□ -0.9
CTR9-202ENST00000524523 RAPGEF4Q8WZA2 1011 aa9.46□□□□□ -0.9
CTR9-202ENST00000524523 LTV1Q96GA3 475 aaPredicted RBP9.46□□□□□ -0.9
CTR9-202ENST00000524523 KDM4CQ9H3R0 1056 aa9.46□□□□□ -0.9
CTR9-202ENST00000524523 LRRC37A3O60309 1634 aa9.45□□□□□ -0.9
CTR9-202ENST00000524523 C6orf229H3BNL8 230 aa9.45□□□□□ -0.9
CTR9-202ENST00000524523 RNMTO43148 476 aaKnown RBP9.45□□□□□ -0.9
CTR9-202ENST00000524523 GJA5P36382 358 aa9.45□□□□□ -0.9
CTR9-202ENST00000524523 TEFQ10587 303 aa9.45□□□□□ -0.9
CTR9-202ENST00000524523 GPBP1L1Q9HC44 474 aaPredicted RBP9.45□□□□□ -0.9
CTR9-202ENST00000524523 IBTKQ9P2D0 1353 aaPredicted RBP9.45□□□□□ -0.9
CTR9-202ENST00000524523 LTN1O94822 1766 aa9.45□□□□□ -0.9
CTR9-202ENST00000524523 ELL2O00472 640 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms