RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 PLEKHO1Q53GL0 409 aaPredicted RBP11.32□□□□□ -0.6
PUM1-213ENST00000524516 DLK2Q6UY11 383 aa11.32□□□□□ -0.6
PUM1-213ENST00000524516 PRDM6Q9NQX0 595 aa11.32□□□□□ -0.6
PUM1-213ENST00000524516 KIF20BQ96Q89 1820 aa11.32□□□□□ -0.6
PUM1-213ENST00000524516 ALDH1B1P30837 517 aa11.31□□□□□ -0.6
PUM1-213ENST00000524516 GMPSP49915 693 aaPredicted RBP11.31□□□□□ -0.6
PUM1-213ENST00000524516 KRT26Q7Z3Y9 468 aa11.31□□□□□ -0.6
PUM1-213ENST00000524516 TMEM106CQ9BVX2 250 aa11.31□□□□□ -0.6
PUM1-213ENST00000524516 BCL2L13Q9BXK5 485 aa11.31□□□□□ -0.6
PUM1-213ENST00000524516 NPM2Q86SE8 214 aaKnown RBP11.3□□□□□ -0.6
PUM1-213ENST00000524516 NBPF5PQ86XG9 351 aaPredicted RBP11.3□□□□□ -0.6
PUM1-213ENST00000524516 RASAL3Q86YV0 1011 aa11.3□□□□□ -0.6
PUM1-213ENST00000524516 TRPM4Q8TD43 1214 aa11.3□□□□□ -0.6
PUM1-213ENST00000524516 TBC1D2BQ9UPU7 963 aa11.3□□□□□ -0.6
PUM1-213ENST00000524516 TRIM17Q9Y577 477 aa11.3□□□□□ -0.6
PUM1-213ENST00000524516 NPC1L1Q9UHC9 1359 aa11.29□□□□□ -0.6
PUM1-213ENST00000524516 PPIP5K2O43314 1243 aa11.29□□□□□ -0.6
PUM1-213ENST00000524516 HIRAP54198 1017 aaPredicted RBP11.29□□□□□ -0.6
PUM1-213ENST00000524516 CDHR2Q9BYE9 1310 aa11.29□□□□□ -0.6
PUM1-213ENST00000524516 COL9A1P20849 921 aa11.28□□□□□ -0.6
PUM1-213ENST00000524516 EIF5P55010 431 aaKnown RBP11.28□□□□□ -0.6
PUM1-213ENST00000524516 NOM1Q5C9Z4 860 aaKnown RBP11.28□□□□□ -0.6
PUM1-213ENST00000524516 SNED1Q8TER0 1413 aa11.27□□□□□ -0.6
PUM1-213ENST00000524516 ADM5C9JUS6 153 aa11.27□□□□□ -0.61
PUM1-213ENST00000524516 STARD3NLO95772 234 aa11.27□□□□□ -0.61
PUM1-213ENST00000524516 CXCL9Q07325 125 aa11.27□□□□□ -0.61
PUM1-213ENST00000524516 SLC39A6Q13433 755 aa11.27□□□□□ -0.61
PUM1-213ENST00000524516 AMOTQ4VCS5 1084 aa11.27□□□□□ -0.61
PUM1-213ENST00000524516 CC2D2BQ6DHV5 1058 aa11.27□□□□□ -0.61
PUM1-213ENST00000524516 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.27□□□□□ -0.61
PUM1-213ENST00000524516 LRCH3Q96II8 777 aa11.27□□□□□ -0.61
PUM1-213ENST00000524516 PUS7Q96PZ0 661 aaKnown RBP11.27□□□□□ -0.61
PUM1-213ENST00000524516 H7C1D1 291 aa11.26□□□□□ -0.61
PUM1-213ENST00000524516 AOC3Q16853 763 aa11.26□□□□□ -0.61
PUM1-213ENST00000524516 ANKRD13DQ6ZTN6 518 aa11.26□□□□□ -0.61
PUM1-213ENST00000524516 DPF3Q92784 378 aa11.26□□□□□ -0.61
PUM1-213ENST00000524516 DCPSQ96C86 337 aaKnown RBP11.26□□□□□ -0.61
PUM1-213ENST00000524516 BRCA2P51587 3418 aa11.26□□□□□ -0.61
PUM1-213ENST00000524516 UNC80Q8N2C7 3258 aa11.26□□□□□ -0.61
PUM1-213ENST00000524516 SOX1O00570 391 aaPredicted RBP11.25□□□□□ -0.61
PUM1-213ENST00000524516 SLC4A8Q2Y0W8 1093 aa11.25□□□□□ -0.61
PUM1-213ENST00000524516 OTOP1Q7RTM1 612 aa11.25□□□□□ -0.61
PUM1-213ENST00000524516 L3MBTL2Q969R5 705 aa11.25□□□□□ -0.61
PUM1-213ENST00000524516 CNOT7Q9UIV1 285 aaKnown RBP11.25□□□□□ -0.61
PUM1-213ENST00000524516 STXBP5LQ9Y2K9 1186 aa11.25□□□□□ -0.61
PUM1-213ENST00000524516 HTTP42858 3142 aa11.25□□□□□ -0.61
PUM1-213ENST00000524516 CENPFP49454 3210 aa11.25□□□□□ -0.61
PUM1-213ENST00000524516 KLRG2A4D1S0 409 aaPredicted RBP11.24□□□□□ -0.61
PUM1-213ENST00000524516 EIF4A2Q14240 407 aaKnown RBP11.24□□□□□ -0.61
PUM1-213ENST00000524516 GRIPAP1Q4V328 841 aa11.24□□□□□ -0.61
PUM1-213ENST00000524516 MICALL2Q8IY33 904 aa11.24□□□□□ -0.61
PUM1-213ENST00000524516 ARMC5Q96C12 935 aa11.24□□□□□ -0.61
PUM1-213ENST00000524516 SLC52A2Q9HAB3 445 aa11.24□□□□□ -0.61
PUM1-213ENST00000524516 ZNRF3Q9ULT6 936 aa11.24□□□□□ -0.61
PUM1-213ENST00000524516 MRC1P22897 1456 aa11.24□□□□□ -0.61
PUM1-213ENST00000524516 SHTN1A0MZ66 631 aa11.23□□□□□ -0.61
PUM1-213ENST00000524516 FAM177BA6PVY3 158 aa11.23□□□□□ -0.61
PUM1-213ENST00000524516 RAD17O75943 681 aa11.23□□□□□ -0.61
PUM1-213ENST00000524516 CAMTA2O94983 1202 aa11.23□□□□□ -0.61
PUM1-213ENST00000524516 VSIG10Q8N0Z9 540 aa11.23□□□□□ -0.61
PUM1-213ENST00000524516 DEFB123Q8N688 67 aa11.23□□□□□ -0.61
PUM1-213ENST00000524516 TCERG1O14776 1098 aaKnown RBP11.22□□□□□ -0.61
PUM1-213ENST00000524516 GTF2E1P29083 439 aaPredicted RBP11.22□□□□□ -0.61
PUM1-213ENST00000524516 PLA2G5P39877 138 aa11.22□□□□□ -0.61
PUM1-213ENST00000524516 SREBF2Q12772 1141 aa11.22□□□□□ -0.61
PUM1-213ENST00000524516 TNIP1Q15025 636 aa11.22□□□□□ -0.61
PUM1-213ENST00000524516 TPTE2Q6XPS3 522 aa11.22□□□□□ -0.61
PUM1-213ENST00000524516 SULF1Q8IWU6 871 aa11.22□□□□□ -0.61
PUM1-213ENST00000524516 FAM122AQ96E09 287 aa11.22□□□□□ -0.61
PUM1-213ENST00000524516 CARD11Q9BXL7 1154 aa11.22□□□□□ -0.61
PUM1-213ENST00000524516 A0A1W2PPC1 479 aa11.21□□□□□ -0.61
PUM1-213ENST00000524516 TNNT2P45379 298 aaPredicted RBP11.21□□□□□ -0.61
PUM1-213ENST00000524516 MKRN3Q13064 507 aaKnown RBP11.21□□□□□ -0.61
PUM1-213ENST00000524516 TBC1D10BQ4KMP7 808 aaPredicted RBP11.21□□□□□ -0.61
PUM1-213ENST00000524516 SAMD7Q7Z3H4 446 aa11.21□□□□□ -0.61
PUM1-213ENST00000524516 DZIP3Q86Y13 1208 aaKnown RBP11.21□□□□□ -0.61
PUM1-213ENST00000524516 RPGRQ92834 1020 aaKnown RBP11.21□□□□□ -0.61
PUM1-213ENST00000524516 TMX4Q9H1E5 349 aaPredicted RBP11.21□□□□□ -0.61
PUM1-213ENST00000524516 R3HDMLQ9H3Y0 253 aa11.21□□□□□ -0.61
PUM1-213ENST00000524516 ZNF652Q9Y2D9 606 aa11.21□□□□□ -0.61
PUM1-213ENST00000524516 PTPN22Q9Y2R2 807 aa11.21□□□□□ -0.61
PUM1-213ENST00000524516 KIAA0100Q14667 2235 aaKnown RBP11.21□□□□□ -0.62
PUM1-213ENST00000524516 RANBP2P49792 3224 aaKnown RBP11.2□□□□□ -0.62
PUM1-213ENST00000524516 PPEF1O14829 653 aaPredicted RBP11.2□□□□□ -0.62
PUM1-213ENST00000524516 MYCP01106 439 aaPredicted RBP11.2□□□□□ -0.62
PUM1-213ENST00000524516 IL6STP40189 918 aaPredicted RBP11.2□□□□□ -0.62
PUM1-213ENST00000524516 TM4SF4P48230 202 aa11.2□□□□□ -0.62
PUM1-213ENST00000524516 RBM26Q5T8P6 1007 aaKnown RBP11.2□□□□□ -0.62
PUM1-213ENST00000524516 TTC5Q8N0Z6 440 aa11.2□□□□□ -0.62
PUM1-213ENST00000524516 CDCA5Q96FF9 252 aa11.2□□□□□ -0.62
PUM1-213ENST00000524516 PRO3102Q9H379 93 aa11.2□□□□□ -0.62
PUM1-213ENST00000524516 Q7L0L9 218 aa11.19□□□□□ -0.62
PUM1-213ENST00000524516 NBPF11Q86T75 865 aa11.19□□□□□ -0.62
PUM1-213ENST00000524516 ERO1AQ96HE7 468 aa11.19□□□□□ -0.62
PUM1-213ENST00000524516 ZNF333Q96JL9 665 aa11.19□□□□□ -0.62
PUM1-213ENST00000524516 LAMB4A4D0S4 1761 aa11.18□□□□□ -0.62
PUM1-213ENST00000524516 CEP290O15078 2479 aa11.18□□□□□ -0.62
PUM1-213ENST00000524516 ERBB4Q15303 1308 aa11.18□□□□□ -0.62
PUM1-213ENST00000524516 FKBP1BP68106 108 aa11.18□□□□□ -0.62
PUM1-213ENST00000524516 SLC9C1Q4G0N8 1177 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms