RNA–Protein interactions for RNA: ENST00000524478.1

MMP3-203, Transcript of matrix metallopeptidase 3, humanhuman

TSL 4

Gene MMP3, Length 559 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-203ENST00000524478 FAM177BA6PVY3 158 aa12.75□□□□□ -0.37
MMP3-203ENST00000524478 TRAF5O00463 557 aa12.75□□□□□ -0.37
MMP3-203ENST00000524478 PER1O15534 1290 aaPredicted RBP12.75□□□□□ -0.37
MMP3-203ENST00000524478 CRY2Q49AN0 593 aa12.75□□□□□ -0.37
MMP3-203ENST00000524478 ANKRD36CQ5JPF3 1778 aa12.75□□□□□ -0.37
MMP3-203ENST00000524478 CYP4F22Q6NT55 531 aa12.75□□□□□ -0.37
MMP3-203ENST00000524478 SYNE4Q8N205 404 aa12.75□□□□□ -0.37
MMP3-203ENST00000524478 PSMD1Q99460 953 aa12.75□□□□□ -0.37
MMP3-203ENST00000524478 NIP7Q9Y221 180 aaKnown RBP eCLIP12.75□□□□□ -0.37
MMP3-203ENST00000524478 HTTP42858 3142 aa12.74□□□□□ -0.37
MMP3-203ENST00000524478 BTBD11A6QL63 1104 aa12.74□□□□□ -0.37
MMP3-203ENST00000524478 U2SURPO15042 1029 aaKnown RBP12.74□□□□□ -0.37
MMP3-203ENST00000524478 EPS15P42566 896 aa12.74□□□□□ -0.37
MMP3-203ENST00000524478 HLFQ16534 295 aa12.74□□□□□ -0.37
MMP3-203ENST00000524478 CST9Q5W186 159 aa12.74□□□□□ -0.37
MMP3-203ENST00000524478 RSPH6AQ9H0K4 717 aa12.74□□□□□ -0.37
MMP3-203ENST00000524478 ZNF652Q9Y2D9 606 aa12.74□□□□□ -0.37
MMP3-203ENST00000524478 DUOX1Q9NRD9 1551 aa12.73□□□□□ -0.37
MMP3-203ENST00000524478 IBTKQ9P2D0 1353 aaPredicted RBP12.73□□□□□ -0.37
MMP3-203ENST00000524478 NPC1L1Q9UHC9 1359 aa12.73□□□□□ -0.37
MMP3-203ENST00000524478 MKI67P46013 3256 aaKnown RBP12.73□□□□□ -0.37
MMP3-203ENST00000524478 CCDC85CA6NKD9 419 aa12.73□□□□□ -0.37
MMP3-203ENST00000524478 AOC2O75106 756 aa12.73□□□□□ -0.37
MMP3-203ENST00000524478 PRKAR2BP31323 418 aa12.73□□□□□ -0.37
MMP3-203ENST00000524478 RGS19P49795 217 aa12.73□□□□□ -0.37
MMP3-203ENST00000524478 NPM2Q86SE8 214 aaKnown RBP12.73□□□□□ -0.37
MMP3-203ENST00000524478 TAF1P21675 1872 aa12.73□□□□□ -0.37
MMP3-203ENST00000524478 LRRC37AA6NMS7 1700 aa12.73□□□□□ -0.37
MMP3-203ENST00000524478 UBN2Q6ZU65 1347 aa12.72□□□□□ -0.37
MMP3-203ENST00000524478 RGL2O15211 777 aa12.72□□□□□ -0.37
MMP3-203ENST00000524478 MLLT1Q03111 559 aaPredicted RBP12.72□□□□□ -0.37
MMP3-203ENST00000524478 GRM1Q13255 1194 aa12.72□□□□□ -0.37
MMP3-203ENST00000524478 PAXIP1Q6ZW49 1069 aaPredicted RBP12.72□□□□□ -0.37
MMP3-203ENST00000524478 NUTM1Q86Y26 1132 aa12.72□□□□□ -0.37
MMP3-203ENST00000524478 GJA3Q9Y6H8 435 aa12.72□□□□□ -0.37
MMP3-203ENST00000524478 TLL2Q9Y6L7 1015 aa12.72□□□□□ -0.37
MMP3-203ENST00000524478 SNRPA1P09661 255 aaKnown RBP12.71□□□□□ -0.37
MMP3-203ENST00000524478 TPTE2Q6XPS3 522 aa12.71□□□□□ -0.37
MMP3-203ENST00000524478 C3orf67Q6ZVT6 689 aa12.71□□□□□ -0.37
MMP3-203ENST00000524478 MCM10Q7L590 875 aa12.71□□□□□ -0.37
MMP3-203ENST00000524478 GPR101Q96P66 508 aaPredicted RBP12.71□□□□□ -0.37
MMP3-203ENST00000524478 LMOD1P29536 600 aaPredicted RBP12.7□□□□□ -0.38
MMP3-203ENST00000524478 JDP2Q8WYK2 163 aa12.7□□□□□ -0.38
MMP3-203ENST00000524478 MCOLN1Q9GZU1 580 aa12.7□□□□□ -0.38
MMP3-203ENST00000524478 POLR2AP24928 1970 aaKnown RBP12.69□□□□□ -0.38
MMP3-203ENST00000524478 ALDH1B1P30837 517 aa12.69□□□□□ -0.38
MMP3-203ENST00000524478 HOXA10P31260 410 aaPredicted RBP12.69□□□□□ -0.38
MMP3-203ENST00000524478 ECE1P42892 770 aa12.69□□□□□ -0.38
MMP3-203ENST00000524478 EIF6P56537 245 aaKnown RBP12.69□□□□□ -0.38
MMP3-203ENST00000524478 DCTN1Q14203 1278 aa12.69□□□□□ -0.38
MMP3-203ENST00000524478 COL4A1P02462 1669 aa12.68□□□□□ -0.38
MMP3-203ENST00000524478 USP50Q70EL3 339 aaPredicted RBP12.68□□□□□ -0.38
MMP3-203ENST00000524478 SAPCD2Q86UD0 394 aa12.68□□□□□ -0.38
MMP3-203ENST00000524478 LARGE2Q8N3Y3 721 aa12.68□□□□□ -0.38
MMP3-203ENST00000524478 CENPFP49454 3210 aa12.68□□□□□ -0.38
MMP3-203ENST00000524478 DDX60Q8IY21 1712 aaKnown RBP12.68□□□□□ -0.38
MMP3-203ENST00000524478 PPEF1O14829 653 aaPredicted RBP12.67□□□□□ -0.38
MMP3-203ENST00000524478 BEGAINQ9BUH8 593 aa12.67□□□□□ -0.38
MMP3-203ENST00000524478 GLIS2Q9BZE0 524 aaPredicted RBP12.67□□□□□ -0.38
MMP3-203ENST00000524478 GPRC5DQ9NZD1 345 aa12.67□□□□□ -0.38
MMP3-203ENST00000524478 AKAP11Q9UKA4 1901 aa12.66□□□□□ -0.38
MMP3-203ENST00000524478 MAP3K15Q6ZN16 1313 aa12.66□□□□□ -0.38
MMP3-203ENST00000524478 CELF2O95319 508 aaKnown RBP12.66□□□□□ -0.38
MMP3-203ENST00000524478 NTSR2O95665 410 aa12.66□□□□□ -0.38
MMP3-203ENST00000524478 MAP2K2P36507 400 aa12.66□□□□□ -0.38
MMP3-203ENST00000524478 CNGB1Q14028 1251 aaPredicted RBP12.66□□□□□ -0.38
MMP3-203ENST00000524478 AOC3Q16853 763 aa12.66□□□□□ -0.38
MMP3-203ENST00000524478 CC2D2BQ6DHV5 1058 aa12.66□□□□□ -0.38
MMP3-203ENST00000524478 TTLL7Q6ZT98 887 aa12.66□□□□□ -0.38
MMP3-203ENST00000524478 NIM1KQ8IY84 436 aa12.66□□□□□ -0.38
MMP3-203ENST00000524478 RPGRQ92834 1020 aaKnown RBP12.66□□□□□ -0.38
MMP3-203ENST00000524478 ZIC5Q96T25 663 aa12.66□□□□□ -0.38
MMP3-203ENST00000524478 SCN9AQ15858 1988 aa12.66□□□□□ -0.38
MMP3-203ENST00000524478 BRCA2P51587 3418 aa12.66□□□□□ -0.38
MMP3-203ENST00000524478 SHTN1A0MZ66 631 aa12.65□□□□□ -0.38
MMP3-203ENST00000524478 PPIP5K2O43314 1243 aa12.65□□□□□ -0.38
MMP3-203ENST00000524478 GPTP24298 496 aa12.65□□□□□ -0.38
MMP3-203ENST00000524478 BRPF1P55201 1214 aaPredicted RBP12.65□□□□□ -0.38
MMP3-203ENST00000524478 TRPM4Q8TD43 1214 aa12.65□□□□□ -0.38
MMP3-203ENST00000524478 NYXQ9GZU5 481 aa12.65□□□□□ -0.38
MMP3-203ENST00000524478 ADARB2Q9NS39 739 aaKnown RBP12.65□□□□□ -0.38
MMP3-203ENST00000524478 ABCC4O15439 1325 aa12.64□□□□□ -0.39
MMP3-203ENST00000524478 ERVV-1B6SEH8 477 aa12.64□□□□□ -0.39
MMP3-203ENST00000524478 TCERG1O14776 1098 aaKnown RBP12.64□□□□□ -0.39
MMP3-203ENST00000524478 GTF2E1P29083 439 aaPredicted RBP12.64□□□□□ -0.39
MMP3-203ENST00000524478 GMPSP49915 693 aaPredicted RBP12.64□□□□□ -0.39
MMP3-203ENST00000524478 CXCL9Q07325 125 aa12.64□□□□□ -0.39
MMP3-203ENST00000524478 SUSD4Q5VX71 490 aa12.64□□□□□ -0.39
MMP3-203ENST00000524478 CIAPIN1Q6FI81 312 aa12.64□□□□□ -0.39
MMP3-203ENST00000524478 CRAMP1Q96RY5 1269 aa12.64□□□□□ -0.39
MMP3-203ENST00000524478 MIS18AQ9NYP9 233 aa12.64□□□□□ -0.39
MMP3-203ENST00000524478 CA12O43570 354 aa12.63□□□□□ -0.39
MMP3-203ENST00000524478 HIRAP54198 1017 aaPredicted RBP12.63□□□□□ -0.39
MMP3-203ENST00000524478 DLK2Q6UY11 383 aa12.63□□□□□ -0.39
MMP3-203ENST00000524478 NGEFQ8N5V2 710 aa12.63□□□□□ -0.39
MMP3-203ENST00000524478 HHIPL1Q96JK4 782 aa12.63□□□□□ -0.39
MMP3-203ENST00000524478 CFAP44Q96MT7 982 aa12.63□□□□□ -0.39
MMP3-203ENST00000524478 ZBTB3Q9H5J0 574 aa12.63□□□□□ -0.39
MMP3-203ENST00000524478 PCDH10Q9P2E7 1040 aa12.63□□□□□ -0.39
MMP3-203ENST00000524478 CDHR2Q9BYE9 1310 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms