RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 NEXNQ0ZGT2 675 aa12.94□□□□□ -0.34
TTC39A-213ENST00000524442 ERFEQ4G0M1 354 aa12.94□□□□□ -0.34
TTC39A-213ENST00000524442 NUTM1Q86Y26 1132 aa12.94□□□□□ -0.34
TTC39A-213ENST00000524442 CNKSR1Q969H4 720 aa12.94□□□□□ -0.34
TTC39A-213ENST00000524442 TRMT112Q9UI30 125 aaKnown RBP12.94□□□□□ -0.34
TTC39A-213ENST00000524442 N4BP2Q86UW6 1770 aaPredicted RBP12.94□□□□□ -0.34
TTC39A-213ENST00000524442 SH3TC1Q8TE82 1336 aa12.93□□□□□ -0.34
TTC39A-213ENST00000524442 PI4KAP2A4QPH2 592 aa12.93□□□□□ -0.34
TTC39A-213ENST00000524442 ATP5J2-PTCD1G3V325 749 aa12.93□□□□□ -0.34
TTC39A-213ENST00000524442 HSP90B1P14625 803 aaKnown RBP12.93□□□□□ -0.34
TTC39A-213ENST00000524442 FKBP5Q13451 457 aaPredicted RBP12.93□□□□□ -0.34
TTC39A-213ENST00000524442 CRY2Q49AN0 593 aa12.93□□□□□ -0.34
TTC39A-213ENST00000524442 G2E3Q7L622 706 aa12.93□□□□□ -0.34
TTC39A-213ENST00000524442 PI4KAP1Q8N8J0 262 aa12.93□□□□□ -0.34
TTC39A-213ENST00000524442 CCDC191Q8NCU4 936 aa12.93□□□□□ -0.34
TTC39A-213ENST00000524442 ZNF622Q969S3 477 aaKnown RBP eCLIP12.93□□□□□ -0.34
TTC39A-213ENST00000524442 MAP3K2Q9Y2U5 619 aa12.93□□□□□ -0.34
TTC39A-213ENST00000524442 ANKRD36CQ5JPF3 1778 aa12.92□□□□□ -0.34
TTC39A-213ENST00000524442 ALDH1B1P30837 517 aa12.92□□□□□ -0.34
TTC39A-213ENST00000524442 ALDH1L2Q3SY69 923 aa12.92□□□□□ -0.34
TTC39A-213ENST00000524442 ANKRD31Q8N7Z5 1873 aa12.92□□□□□ -0.34
TTC39A-213ENST00000524442 NLRP3Q96P20 1036 aa12.92□□□□□ -0.34
TTC39A-213ENST00000524442 MYD88Q99836 296 aa12.92□□□□□ -0.34
TTC39A-213ENST00000524442 WWC3Q9ULE0 1092 aa12.92□□□□□ -0.34
TTC39A-213ENST00000524442 CACNA1FO60840 1977 aa12.92□□□□□ -0.34
TTC39A-213ENST00000524442 ADCY9O60503 1353 aa12.92□□□□□ -0.34
TTC39A-213ENST00000524442 ABCC12Q96J65 1359 aa12.92□□□□□ -0.34
TTC39A-213ENST00000524442 ZBED9Q6R2W3 1325 aa12.91□□□□□ -0.34
TTC39A-213ENST00000524442 BRCA1P38398 1863 aaKnown RBP12.91□□□□□ -0.34
TTC39A-213ENST00000524442 ZBTB38Q8NAP3 1195 aaPredicted RBP12.91□□□□□ -0.34
TTC39A-213ENST00000524442 DNAAF4Q8WXU2 420 aa12.91□□□□□ -0.34
TTC39A-213ENST00000524442 CWC25Q9NXE8 425 aaPredicted RBP12.91□□□□□ -0.34
TTC39A-213ENST00000524442 DLEC1Q9Y238 1755 aa12.91□□□□□ -0.34
TTC39A-213ENST00000524442 ARFGEF2Q9Y6D5 1785 aa12.9□□□□□ -0.34
TTC39A-213ENST00000524442 PCCAP05165 728 aaPredicted RBP12.9□□□□□ -0.34
TTC39A-213ENST00000524442 HOXA10P31260 410 aaPredicted RBP12.9□□□□□ -0.34
TTC39A-213ENST00000524442 SOGA3Q5TF21 947 aa12.9□□□□□ -0.34
TTC39A-213ENST00000524442 RBM17Q96I25 401 aaKnown RBP12.9□□□□□ -0.34
TTC39A-213ENST00000524442 IGKV5-2P06315 115 aa12.89□□□□□ -0.35
TTC39A-213ENST00000524442 PRPF40BQ6NWY9 871 aaKnown RBP12.89□□□□□ -0.35
TTC39A-213ENST00000524442 ARHGAP27Q6ZUM4 889 aa12.89□□□□□ -0.35
TTC39A-213ENST00000524442 MRPL50Q8N5N7 158 aaKnown RBP12.89□□□□□ -0.35
TTC39A-213ENST00000524442 LINS1Q8NG48 757 aa12.89□□□□□ -0.35
TTC39A-213ENST00000524442 RPGRQ92834 1020 aaKnown RBP12.89□□□□□ -0.35
TTC39A-213ENST00000524442 CRAMP1Q96RY5 1269 aa12.89□□□□□ -0.35
TTC39A-213ENST00000524442 GOLGB1Q14789 3259 aaKnown RBP12.89□□□□□ -0.35
TTC39A-213ENST00000524442 PTPRCP08575 1304 aa12.88□□□□□ -0.35
TTC39A-213ENST00000524442 ARFGEF1Q9Y6D6 1849 aa12.88□□□□□ -0.35
TTC39A-213ENST00000524442 UTRNP46939 3433 aa12.88□□□□□ -0.35
TTC39A-213ENST00000524442 NEURL1BA8MQ27 555 aa12.88□□□□□ -0.35
TTC39A-213ENST00000524442 HCLS1P14317 486 aaPredicted RBP12.88□□□□□ -0.35
TTC39A-213ENST00000524442 YY1P25490 414 aa12.88□□□□□ -0.35
TTC39A-213ENST00000524442 BRPF1P55201 1214 aaPredicted RBP12.88□□□□□ -0.35
TTC39A-213ENST00000524442 SSH1Q8WYL5 1049 aa12.88□□□□□ -0.35
TTC39A-213ENST00000524442 FAM89AQ96GI7 184 aa12.88□□□□□ -0.35
TTC39A-213ENST00000524442 COL11A2P13942 1736 aaPredicted RBP12.88□□□□□ -0.35
TTC39A-213ENST00000524442 CDHR2Q9BYE9 1310 aa12.88□□□□□ -0.35
TTC39A-213ENST00000524442 IRS4O14654 1257 aaPredicted RBP12.87□□□□□ -0.35
TTC39A-213ENST00000524442 SF3B3Q15393 1217 aaKnown RBP12.87□□□□□ -0.35
TTC39A-213ENST00000524442 SYNE4Q8N205 404 aa12.87□□□□□ -0.35
TTC39A-213ENST00000524442 C21orf2O43822 256 aa12.86□□□□□ -0.35
TTC39A-213ENST00000524442 GCKRQ14397 625 aa12.86□□□□□ -0.35
TTC39A-213ENST00000524442 CWF19L2Q2TBE0 894 aaKnown RBP12.86□□□□□ -0.35
TTC39A-213ENST00000524442 GRIPAP1Q4V328 841 aa12.86□□□□□ -0.35
TTC39A-213ENST00000524442 CC2D2BQ6DHV5 1058 aa12.86□□□□□ -0.35
TTC39A-213ENST00000524442 C3orf67Q6ZVT6 689 aa12.86□□□□□ -0.35
TTC39A-213ENST00000524442 DDX46Q7L014 1031 aaKnown RBP12.86□□□□□ -0.35
TTC39A-213ENST00000524442 C7orf43Q8WVR3 580 aa12.86□□□□□ -0.35
TTC39A-213ENST00000524442 SMC4Q9NTJ3 1288 aa12.86□□□□□ -0.35
TTC39A-213ENST00000524442 TNRC6CQ9HCJ0 1690 aaKnown RBP12.86□□□□□ -0.35
TTC39A-213ENST00000524442 F6X3S4 739 aa12.85□□□□□ -0.35
TTC39A-213ENST00000524442 H7C1W4 665 aa12.85□□□□□ -0.35
TTC39A-213ENST00000524442 PDE8AO60658 829 aa12.85□□□□□ -0.35
TTC39A-213ENST00000524442 ALDH1L1O75891 902 aa12.85□□□□□ -0.35
TTC39A-213ENST00000524442 BBOX1O75936 387 aa12.85□□□□□ -0.35
TTC39A-213ENST00000524442 RARSP54136 660 aaKnown RBP12.85□□□□□ -0.35
TTC39A-213ENST00000524442 CCDC93Q567U6 631 aa12.85□□□□□ -0.35
TTC39A-213ENST00000524442 BEND3Q5T5X7 828 aa12.85□□□□□ -0.35
TTC39A-213ENST00000524442 TMC4Q7Z404 712 aa12.85□□□□□ -0.35
TTC39A-213ENST00000524442 CHD4Q14839 1912 aa12.85□□□□□ -0.35
TTC39A-213ENST00000524442 LTBP3Q9NS15 1303 aa12.85□□□□□ -0.35
TTC39A-213ENST00000524442 RTKN2Q8IZC4 609 aa12.84□□□□□ -0.35
TTC39A-213ENST00000524442 TMX4Q9H1E5 349 aaPredicted RBP12.84□□□□□ -0.35
TTC39A-213ENST00000524442 GRAPQ13588 217 aa12.83□□□□□ -0.36
TTC39A-213ENST00000524442 CCDC152Q4G0S7 254 aa12.83□□□□□ -0.36
TTC39A-213ENST00000524442 RTL5Q5HYW3 569 aaPredicted RBP12.83□□□□□ -0.36
TTC39A-213ENST00000524442 GRAPLQ8TC17 118 aaPredicted RBP12.83□□□□□ -0.36
TTC39A-213ENST00000524442 ARHGAP45Q92619 1136 aa12.83□□□□□ -0.36
TTC39A-213ENST00000524442 PLA2G12BQ9BX93 195 aa12.83□□□□□ -0.36
TTC39A-213ENST00000524442 BCL2L13Q9BXK5 485 aa12.83□□□□□ -0.36
TTC39A-213ENST00000524442 SRCIN1Q9C0H9 1055 aa12.83□□□□□ -0.36
TTC39A-213ENST00000524442 ABCC4O15439 1325 aa12.83□□□□□ -0.36
TTC39A-213ENST00000524442 KIF16BQ96L93 1317 aa12.83□□□□□ -0.36
TTC39A-213ENST00000524442 NFKBIEO00221 500 aa12.82□□□□□ -0.36
TTC39A-213ENST00000524442 PPEF1O14829 653 aaPredicted RBP12.82□□□□□ -0.36
TTC39A-213ENST00000524442 LMNB1P20700 586 aa12.82□□□□□ -0.36
TTC39A-213ENST00000524442 SLC4A10Q6U841 1118 aa12.82□□□□□ -0.36
TTC39A-213ENST00000524442 UBE3BQ7Z3V4 1068 aa12.82□□□□□ -0.36
TTC39A-213ENST00000524442 API5Q9BZZ5 524 aaKnown RBP12.82□□□□□ -0.36
TTC39A-213ENST00000524442 TAOK3Q9H2K8 898 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms