RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 TNRC6CQ9HCJ0 1690 aaKnown RBP26.91■■□□□ 1.9
TRAPPC9-215ENST00000524162 ERFEQ4G0M1 354 aa26.9■■□□□ 1.9
TRAPPC9-215ENST00000524162 SOGA3Q5TF21 947 aa26.9■■□□□ 1.9
TRAPPC9-215ENST00000524162 ISCA1Q9BUE6 129 aa26.9■■□□□ 1.9
TRAPPC9-215ENST00000524162 STK31Q9BXU1 1019 aa26.9■■□□□ 1.9
TRAPPC9-215ENST00000524162 SALL2Q9Y467 1007 aaPredicted RBP26.9■■□□□ 1.9
TRAPPC9-215ENST00000524162 SENP3-EIF4A1A0A087X0R7 540 aa26.89■■□□□ 1.9
TRAPPC9-215ENST00000524162 FAM177BA6PVY3 158 aa26.89■■□□□ 1.9
TRAPPC9-215ENST00000524162 ALDH1B1P30837 517 aa26.89■■□□□ 1.9
TRAPPC9-215ENST00000524162 DDX58O95786 925 aaKnown RBP26.88■■□□□ 1.89
TRAPPC9-215ENST00000524162 HOXA10P31260 410 aaPredicted RBP26.88■■□□□ 1.89
TRAPPC9-215ENST00000524162 NUTM1Q86Y26 1132 aa26.88■■□□□ 1.89
TRAPPC9-215ENST00000524162 DIEXFQ68CQ4 756 aaKnown RBP26.87■■□□□ 1.89
TRAPPC9-215ENST00000524162 PRPF40BQ6NWY9 871 aaKnown RBP26.87■■□□□ 1.89
TRAPPC9-215ENST00000524162 PHAXQ9H814 394 aaKnown RBP26.87■■□□□ 1.89
TRAPPC9-215ENST00000524162 CCDC88AQ3V6T2 1871 aa26.87■■□□□ 1.89
TRAPPC9-215ENST00000524162 LTBP3Q9NS15 1303 aa26.87■■□□□ 1.89
TRAPPC9-215ENST00000524162 DICER1Q9UPY3 1922 aaKnown RBP26.86■■□□□ 1.89
TRAPPC9-215ENST00000524162 VAMP4O75379 141 aa26.86■■□□□ 1.89
TRAPPC9-215ENST00000524162 C7orf43Q8WVR3 580 aa26.86■■□□□ 1.89
TRAPPC9-215ENST00000524162 SPINK5Q9NQ38 1064 aaPredicted RBP26.86■■□□□ 1.89
TRAPPC9-215ENST00000524162 ZC3H4Q9UPT8 1303 aaKnown RBP26.86■■□□□ 1.89
TRAPPC9-215ENST00000524162 RIC3Q7Z5B4 369 aa26.85■■□□□ 1.89
TRAPPC9-215ENST00000524162 SH3TC1Q8TE82 1336 aa26.85■■□□□ 1.89
TRAPPC9-215ENST00000524162 LAMB2P55268 1798 aa26.84■■□□□ 1.89
TRAPPC9-215ENST00000524162 NLRP3Q96P20 1036 aa26.84■■□□□ 1.89
TRAPPC9-215ENST00000524162 EXOSC9Q06265 439 aaKnown RBP26.83■■□□□ 1.89
TRAPPC9-215ENST00000524162 CRAMP1Q96RY5 1269 aa26.83■■□□□ 1.89
TRAPPC9-215ENST00000524162 TRMT112Q9UI30 125 aaKnown RBP26.83■■□□□ 1.89
TRAPPC9-215ENST00000524162 KSR2Q6VAB6 950 aa26.82■■□□□ 1.88
TRAPPC9-215ENST00000524162 E9PSI1 815 aa26.81■■□□□ 1.88
TRAPPC9-215ENST00000524162 C21orf2O43822 256 aa26.81■■□□□ 1.88
TRAPPC9-215ENST00000524162 LMNB1P20700 586 aa26.81■■□□□ 1.88
TRAPPC9-215ENST00000524162 GRIPAP1Q4V328 841 aa26.81■■□□□ 1.88
TRAPPC9-215ENST00000524162 CC2D2BQ6DHV5 1058 aa26.81■■□□□ 1.88
TRAPPC9-215ENST00000524162 CCDC191Q8NCU4 936 aa26.81■■□□□ 1.88
TRAPPC9-215ENST00000524162 RPGRQ92834 1020 aaKnown RBP26.81■■□□□ 1.88
TRAPPC9-215ENST00000524162 METTL22Q9BUU2 404 aaPredicted RBP26.81■■□□□ 1.88
TRAPPC9-215ENST00000524162 DDX60Q8IY21 1712 aaKnown RBP26.81■■□□□ 1.88
TRAPPC9-215ENST00000524162 NFKBIEO00221 500 aa26.8■■□□□ 1.88
TRAPPC9-215ENST00000524162 SLC4A2P04920 1241 aa26.8■■□□□ 1.88
TRAPPC9-215ENST00000524162 C9orf131Q5VYM1 1079 aa26.8■■□□□ 1.88
TRAPPC9-215ENST00000524162 HSP90B1P14625 803 aaKnown RBP26.79■■□□□ 1.88
TRAPPC9-215ENST00000524162 RBM17Q96I25 401 aaKnown RBP26.79■■□□□ 1.88
TRAPPC9-215ENST00000524162 CCDC93Q567U6 631 aa26.78■■□□□ 1.88
TRAPPC9-215ENST00000524162 ATP5J2-PTCD1G3V325 749 aa26.77■■□□□ 1.88
TRAPPC9-215ENST00000524162 RTKN2Q8IZC4 609 aa26.77■■□□□ 1.88
TRAPPC9-215ENST00000524162 PI4KAP2A4QPH2 592 aa26.76■■□□□ 1.87
TRAPPC9-215ENST00000524162 FLIIQ13045 1269 aa26.76■■□□□ 1.87
TRAPPC9-215ENST00000524162 PI4KAP1Q8N8J0 262 aa26.76■■□□□ 1.87
TRAPPC9-215ENST00000524162 ZBTB38Q8NAP3 1195 aaPredicted RBP26.76■■□□□ 1.87
TRAPPC9-215ENST00000524162 TAOK3Q9H2K8 898 aa26.76■■□□□ 1.87
TRAPPC9-215ENST00000524162 RNF181Q9P0P0 153 aa26.76■■□□□ 1.87
TRAPPC9-215ENST00000524162 MAP3K2Q9Y2U5 619 aa26.76■■□□□ 1.87
TRAPPC9-215ENST00000524162 SNED1Q8TER0 1413 aa26.75■■□□□ 1.87
TRAPPC9-215ENST00000524162 RASSF7Q02833 373 aa26.75■■□□□ 1.87
TRAPPC9-215ENST00000524162 SLFN5Q08AF3 891 aa26.75■■□□□ 1.87
TRAPPC9-215ENST00000524162 ZNF428Q96B54 188 aa26.75■■□□□ 1.87
TRAPPC9-215ENST00000524162 GPBP1L1Q9HC44 474 aaPredicted RBP26.75■■□□□ 1.87
TRAPPC9-215ENST00000524162 SF3B3Q15393 1217 aaKnown RBP26.74■■□□□ 1.87
TRAPPC9-215ENST00000524162 C3orf67Q6ZVT6 689 aa26.74■■□□□ 1.87
TRAPPC9-215ENST00000524162 MIER1Q8N108 512 aa26.74■■□□□ 1.87
TRAPPC9-215ENST00000524162 MYD88Q99836 296 aa26.74■■□□□ 1.87
TRAPPC9-215ENST00000524162 CWC25Q9NXE8 425 aaPredicted RBP26.74■■□□□ 1.87
TRAPPC9-215ENST00000524162 TIAM2Q8IVF5 1701 aa26.73■■□□□ 1.87
TRAPPC9-215ENST00000524162 PCCAP05165 728 aaPredicted RBP26.73■■□□□ 1.87
TRAPPC9-215ENST00000524162 NEXNQ0ZGT2 675 aa26.73■■□□□ 1.87
TRAPPC9-215ENST00000524162 G2E3Q7L622 706 aa26.73■■□□□ 1.87
TRAPPC9-215ENST00000524162 TRMT2AQ8IZ69 625 aaKnown RBP26.73■■□□□ 1.87
TRAPPC9-215ENST00000524162 BBOX1O75936 387 aa26.72■■□□□ 1.87
TRAPPC9-215ENST00000524162 HCLS1P14317 486 aaPredicted RBP26.72■■□□□ 1.87
TRAPPC9-215ENST00000524162 PRELPP51888 382 aa26.72■■□□□ 1.87
TRAPPC9-215ENST00000524162 SYNE4Q8N205 404 aa26.72■■□□□ 1.87
TRAPPC9-215ENST00000524162 FAM89AQ96GI7 184 aa26.72■■□□□ 1.87
TRAPPC9-215ENST00000524162 FKBP4Q02790 459 aaKnown RBP eCLIP26.71■■□□□ 1.87
TRAPPC9-215ENST00000524162 TMC4Q7Z404 712 aa26.71■■□□□ 1.87
TRAPPC9-215ENST00000524162 PSMD1Q99460 953 aa26.71■■□□□ 1.87
TRAPPC9-215ENST00000524162 MYH3P11055 1940 aa26.71■■□□□ 1.87
TRAPPC9-215ENST00000524162 TCERG1O14776 1098 aaKnown RBP26.7■■□□□ 1.86
TRAPPC9-215ENST00000524162 ZNF219Q9P2Y4 722 aaPredicted RBP26.7■■□□□ 1.86
TRAPPC9-215ENST00000524162 CDHR2Q9BYE9 1310 aa26.69■■□□□ 1.86
TRAPPC9-215ENST00000524162 IRS4O14654 1257 aaPredicted RBP26.69■■□□□ 1.86
TRAPPC9-215ENST00000524162 IGKV5-2P06315 115 aa26.69■■□□□ 1.86
TRAPPC9-215ENST00000524162 FKBP5Q13451 457 aaPredicted RBP26.69■■□□□ 1.86
TRAPPC9-215ENST00000524162 DDX46Q7L014 1031 aaKnown RBP26.69■■□□□ 1.86
TRAPPC9-215ENST00000524162 ABCC4O15439 1325 aa26.68■■□□□ 1.86
TRAPPC9-215ENST00000524162 KDM2BQ8NHM5 1336 aa26.68■■□□□ 1.86
TRAPPC9-215ENST00000524162 PPEF1O14829 653 aaPredicted RBP26.68■■□□□ 1.86
TRAPPC9-215ENST00000524162 CT47B1P0C2W7 299 aaPredicted RBP26.68■■□□□ 1.86
TRAPPC9-215ENST00000524162 DNAAF4Q8WXU2 420 aa26.68■■□□□ 1.86
TRAPPC9-215ENST00000524162 ATP6V0A2Q9Y487 856 aa26.68■■□□□ 1.86
TRAPPC9-215ENST00000524162 LINS1Q8NG48 757 aa26.67■■□□□ 1.86
TRAPPC9-215ENST00000524162 LRRC37AA6NMS7 1700 aa26.66■■□□□ 1.86
TRAPPC9-215ENST00000524162 NEURL1BA8MQ27 555 aa26.66■■□□□ 1.86
TRAPPC9-215ENST00000524162 GRAPQ13588 217 aa26.66■■□□□ 1.86
TRAPPC9-215ENST00000524162 GRAPLQ8TC17 118 aaPredicted RBP26.66■■□□□ 1.86
TRAPPC9-215ENST00000524162 TMX4Q9H1E5 349 aaPredicted RBP26.66■■□□□ 1.86
TRAPPC9-215ENST00000524162 TAF1P21675 1872 aa26.66■■□□□ 1.86
TRAPPC9-215ENST00000524162 SP8Q8IXZ3 490 aa26.65■■□□□ 1.86
TRAPPC9-215ENST00000524162 VPS33BQ9H267 617 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms