RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 IL17REQ8NFR9 667 aa12.16□□□□□ -0.46
SPIDR-225ENST00000524141 DNAAF4Q8WXU2 420 aa12.16□□□□□ -0.46
SPIDR-225ENST00000524141 C16orf45Q96MC5 204 aaPredicted RBP12.16□□□□□ -0.46
SPIDR-225ENST00000524141 TPCN1Q9ULQ1 816 aa12.16□□□□□ -0.46
SPIDR-225ENST00000524141 TNNT1P13805 278 aa12.15□□□□□ -0.46
SPIDR-225ENST00000524141 TAF3Q5VWG9 929 aa12.15□□□□□ -0.46
SPIDR-225ENST00000524141 CREB3L3Q68CJ9 461 aa12.15□□□□□ -0.46
SPIDR-225ENST00000524141 CCDC112Q8NEF3 446 aa12.15□□□□□ -0.46
SPIDR-225ENST00000524141 ALDH8A1Q9H2A2 487 aaPredicted RBP12.15□□□□□ -0.46
SPIDR-225ENST00000524141 RBM8AQ9Y5S9 174 aaKnown RBP12.15□□□□□ -0.46
SPIDR-225ENST00000524141 NEMFO60524 1076 aa12.15□□□□□ -0.46
SPIDR-225ENST00000524141 IFIT2P09913 472 aaKnown RBP12.15□□□□□ -0.46
SPIDR-225ENST00000524141 BEND3Q5T5X7 828 aa12.15□□□□□ -0.46
SPIDR-225ENST00000524141 NECAB1Q8N987 351 aa12.15□□□□□ -0.46
SPIDR-225ENST00000524141 GABPB1Q06547 395 aaPredicted RBP12.14□□□□□ -0.47
SPIDR-225ENST00000524141 MAP4K1Q92918 833 aa12.14□□□□□ -0.47
SPIDR-225ENST00000524141 CHMP3Q9Y3E7 222 aa12.14□□□□□ -0.47
SPIDR-225ENST00000524141 ZNF165P49910 485 aa12.14□□□□□ -0.47
SPIDR-225ENST00000524141 FERMT3Q86UX7 667 aa12.14□□□□□ -0.47
SPIDR-225ENST00000524141 CKAP2LQ8IYA6 745 aa12.14□□□□□ -0.47
SPIDR-225ENST00000524141 TMEM2Q9UHN6 1383 aa12.14□□□□□ -0.47
SPIDR-225ENST00000524141 BLOC1S2Q6QNY1 142 aa12.13□□□□□ -0.47
SPIDR-225ENST00000524141 LEO1Q8WVC0 666 aaPredicted RBP12.13□□□□□ -0.47
SPIDR-225ENST00000524141 SNRKQ9NRH2 765 aa12.13□□□□□ -0.47
SPIDR-225ENST00000524141 CLIP2Q9UDT6 1046 aa12.13□□□□□ -0.47
SPIDR-225ENST00000524141 CTNNA3Q9UI47 895 aa12.13□□□□□ -0.47
SPIDR-225ENST00000524141 NWD1Q149M9 1564 aa12.13□□□□□ -0.47
SPIDR-225ENST00000524141 PIK3C2AO00443 1686 aa12.13□□□□□ -0.47
SPIDR-225ENST00000524141 ADAMTS13Q76LX8 1427 aa12.13□□□□□ -0.47
SPIDR-225ENST00000524141 NUTM2FA1L443 756 aa12.13□□□□□ -0.47
SPIDR-225ENST00000524141 GIGYF1O75420 1035 aaPredicted RBP12.13□□□□□ -0.47
SPIDR-225ENST00000524141 LRMPQ12912 555 aa12.13□□□□□ -0.47
SPIDR-225ENST00000524141 TPD52L1Q16890 204 aaPredicted RBP12.13□□□□□ -0.47
SPIDR-225ENST00000524141 HMG20BQ9P0W2 317 aa12.13□□□□□ -0.47
SPIDR-225ENST00000524141 DIP2BQ9P265 1576 aa12.12□□□□□ -0.47
SPIDR-225ENST00000524141 CEMIPQ8WUJ3 1361 aa12.12□□□□□ -0.47
SPIDR-225ENST00000524141 PI4KAP2A4QPH2 592 aa12.12□□□□□ -0.47
SPIDR-225ENST00000524141 SLC27A2O14975 620 aa12.12□□□□□ -0.47
SPIDR-225ENST00000524141 SARM1Q6SZW1 724 aa12.12□□□□□ -0.47
SPIDR-225ENST00000524141 PI4KAP1Q8N8J0 262 aa12.12□□□□□ -0.47
SPIDR-225ENST00000524141 BICD2Q8TD16 824 aa12.12□□□□□ -0.47
SPIDR-225ENST00000524141 UBR1Q8IWV7 1749 aa12.12□□□□□ -0.47
SPIDR-225ENST00000524141 GOLGA6L19H0YKK7 550 aa12.12□□□□□ -0.47
SPIDR-225ENST00000524141 RPS6KB1P23443 525 aa12.12□□□□□ -0.47
SPIDR-225ENST00000524141 ESF1Q9H501 851 aaKnown RBP12.12□□□□□ -0.47
SPIDR-225ENST00000524141 DDX41Q9UJV9 622 aaKnown RBP12.12□□□□□ -0.47
SPIDR-225ENST00000524141 MED1Q15648 1581 aaPredicted RBP12.11□□□□□ -0.47
SPIDR-225ENST00000524141 HOXC9P31274 260 aa12.11□□□□□ -0.47
SPIDR-225ENST00000524141 NGDNQ8NEJ9 315 aaKnown RBP12.11□□□□□ -0.47
SPIDR-225ENST00000524141 CHPF2Q9P2E5 772 aa12.11□□□□□ -0.47
SPIDR-225ENST00000524141 NRBP1Q9UHY1 535 aa12.11□□□□□ -0.47
SPIDR-225ENST00000524141 KDM3BQ7LBC6 1761 aa12.11□□□□□ -0.47
SPIDR-225ENST00000524141 CTAGE5O15320 804 aa12.11□□□□□ -0.47
SPIDR-225ENST00000524141 ALDH1L1O75891 902 aa12.11□□□□□ -0.47
SPIDR-225ENST00000524141 EIF2S2P20042 333 aaKnown RBP12.11□□□□□ -0.47
SPIDR-225ENST00000524141 CEP135Q66GS9 1140 aa12.11□□□□□ -0.47
SPIDR-225ENST00000524141 FAM173BQ6P4H8 233 aa12.11□□□□□ -0.47
SPIDR-225ENST00000524141 MRFAP1L1Q96HT8 127 aa12.11□□□□□ -0.47
SPIDR-225ENST00000524141 PLEKHG1Q9ULL1 1385 aa12.1□□□□□ -0.47
SPIDR-225ENST00000524141 DIP2AQ14689 1571 aa12.1□□□□□ -0.47
SPIDR-225ENST00000524141 NR1I2O75469 434 aa12.1□□□□□ -0.47
SPIDR-225ENST00000524141 EIF4A1P60842 406 aaKnown RBP12.1□□□□□ -0.47
SPIDR-225ENST00000524141 NMIQ13287 307 aaPredicted RBP12.1□□□□□ -0.47
SPIDR-225ENST00000524141 LARP1Q6PKG0 1096 aaKnown RBP12.1□□□□□ -0.47
SPIDR-225ENST00000524141 AACSQ86V21 672 aa12.1□□□□□ -0.47
SPIDR-225ENST00000524141 CACTINQ8WUQ7 758 aaKnown RBP12.1□□□□□ -0.47
SPIDR-225ENST00000524141 DNAJC25Q9H1X3 360 aa12.1□□□□□ -0.47
SPIDR-225ENST00000524141 ZSCAN16Q9H4T2 348 aaPredicted RBP12.1□□□□□ -0.47
SPIDR-225ENST00000524141 CFAP45Q9UL16 551 aa12.1□□□□□ -0.47
SPIDR-225ENST00000524141 TNRQ92752 1358 aa12.1□□□□□ -0.47
SPIDR-225ENST00000524141 RBM6P78332 1123 aaKnown RBP12.1□□□□□ -0.47
SPIDR-225ENST00000524141 KRT32Q14532 448 aa12.1□□□□□ -0.47
SPIDR-225ENST00000524141 TSGA10IPQ3SY00 556 aa12.1□□□□□ -0.47
SPIDR-225ENST00000524141 TFIP11Q9UBB9 837 aaKnown RBP12.1□□□□□ -0.47
SPIDR-225ENST00000524141 MORC2Q9Y6X9 1032 aaPredicted RBP12.1□□□□□ -0.47
SPIDR-225ENST00000524141 USP54Q70EL1 1684 aa12.1□□□□□ -0.47
SPIDR-225ENST00000524141 NPHP4O75161 1426 aaPredicted RBP12.09□□□□□ -0.47
SPIDR-225ENST00000524141 ZNF771Q7L3S4 317 aaPredicted RBP12.09□□□□□ -0.47
SPIDR-225ENST00000524141 LRRC8AQ8IWT6 810 aa12.09□□□□□ -0.47
SPIDR-225ENST00000524141 C9orf78Q9NZ63 289 aaPredicted RBP12.09□□□□□ -0.47
SPIDR-225ENST00000524141 ADCY9O60503 1353 aa12.09□□□□□ -0.47
SPIDR-225ENST00000524141 JCADQ9P266 1359 aa12.09□□□□□ -0.47
SPIDR-225ENST00000524141 MLECQ14165 292 aa12.09□□□□□ -0.47
SPIDR-225ENST00000524141 DDX54Q8TDD1 881 aaKnown RBP12.09□□□□□ -0.47
SPIDR-225ENST00000524141 FAM227BQ96M60 508 aa12.09□□□□□ -0.47
SPIDR-225ENST00000524141 PODXL2Q9NZ53 605 aa12.09□□□□□ -0.47
SPIDR-225ENST00000524141 MED23Q9ULK4 1368 aa12.09□□□□□ -0.47
SPIDR-225ENST00000524141 KIF2AO00139 706 aaPredicted RBP12.08□□□□□ -0.48
SPIDR-225ENST00000524141 DTNBO60941 627 aa12.08□□□□□ -0.48
SPIDR-225ENST00000524141 NLRP6P59044 892 aa12.08□□□□□ -0.48
SPIDR-225ENST00000524141 TOB2Q14106 344 aaPredicted RBP12.08□□□□□ -0.48
SPIDR-225ENST00000524141 STX1AQ16623 288 aa12.08□□□□□ -0.48
SPIDR-225ENST00000524141 ZNF397Q8NF99 534 aaPredicted RBP12.08□□□□□ -0.48
SPIDR-225ENST00000524141 KIF18AQ8NI77 898 aa12.08□□□□□ -0.48
SPIDR-225ENST00000524141 PGBD1Q96JS3 809 aa12.08□□□□□ -0.48
SPIDR-225ENST00000524141 SLIT1O75093 1534 aa12.08□□□□□ -0.48
SPIDR-225ENST00000524141 PTPN14Q15678 1187 aa12.08□□□□□ -0.48
SPIDR-225ENST00000524141 DBF4Q9UBU7 674 aaPredicted RBP12.08□□□□□ -0.48
SPIDR-225ENST00000524141 H3BQV1 296 aa12.07□□□□□ -0.48
SPIDR-225ENST00000524141 IFFO2Q5TF58 517 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms