RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 GPBP1L1Q9HC44 474 aaPredicted RBP24.75■■□□□ 1.55
FBXO28-205ENST00000523990 RNF181Q9P0P0 153 aa24.75■■□□□ 1.55
FBXO28-205ENST00000523990 SALL2Q9Y467 1007 aaPredicted RBP24.75■■□□□ 1.55
FBXO28-205ENST00000523990 PRELPP51888 382 aa24.74■■□□□ 1.55
FBXO28-205ENST00000523990 TCIRG1Q13488 830 aa24.74■■□□□ 1.55
FBXO28-205ENST00000523990 ANKRD13DQ6ZTN6 518 aa24.74■■□□□ 1.55
FBXO28-205ENST00000523990 NLRP10Q86W26 655 aa24.74■■□□□ 1.55
FBXO28-205ENST00000523990 ZNF219Q9P2Y4 722 aaPredicted RBP24.74■■□□□ 1.55
FBXO28-205ENST00000523990 RNF123Q5XPI4 1314 aa24.74■■□□□ 1.55
FBXO28-205ENST00000523990 UTP14AQ9BVJ6 771 aaKnown RBP24.73■■□□□ 1.55
FBXO28-205ENST00000523990 FANCIQ9NVI1 1328 aa24.73■■□□□ 1.55
FBXO28-205ENST00000523990 LMNB1P20700 586 aa24.72■■□□□ 1.55
FBXO28-205ENST00000523990 WDR63Q8IWG1 891 aa24.72■■□□□ 1.55
FBXO28-205ENST00000523990 CCDC30Q5VVM6 783 aa24.71■■□□□ 1.55
FBXO28-205ENST00000523990 PHAXQ9H814 394 aaKnown RBP24.71■■□□□ 1.55
FBXO28-205ENST00000523990 SOGA3Q5TF21 947 aa24.7■■□□□ 1.55
FBXO28-205ENST00000523990 C7orf43Q8WVR3 580 aa24.7■■□□□ 1.55
FBXO28-205ENST00000523990 CHMP4AQ9BY43 222 aa24.7■■□□□ 1.55
FBXO28-205ENST00000523990 ALDH1B1P30837 517 aa24.69■■□□□ 1.54
FBXO28-205ENST00000523990 TWISTNBQ3B726 338 aaPredicted RBP24.69■■□□□ 1.54
FBXO28-205ENST00000523990 ISCA1Q9BUE6 129 aa24.69■■□□□ 1.54
FBXO28-205ENST00000523990 LTBP3Q9NS15 1303 aa24.69■■□□□ 1.54
FBXO28-205ENST00000523990 ZC3H4Q9UPT8 1303 aaKnown RBP24.69■■□□□ 1.54
FBXO28-205ENST00000523990 SLC10A5Q5PT55 438 aa24.69■■□□□ 1.54
FBXO28-205ENST00000523990 C3orf67Q6ZVT6 689 aa24.69■■□□□ 1.54
FBXO28-205ENST00000523990 SNED1Q8TER0 1413 aa24.68■■□□□ 1.54
FBXO28-205ENST00000523990 TAF1P21675 1872 aa24.68■■□□□ 1.54
FBXO28-205ENST00000523990 HOXA10P31260 410 aaPredicted RBP24.68■■□□□ 1.54
FBXO28-205ENST00000523990 GOLGA2Q08379 1002 aa24.68■■□□□ 1.54
FBXO28-205ENST00000523990 RPGRQ92834 1020 aaKnown RBP24.68■■□□□ 1.54
FBXO28-205ENST00000523990 TAOK3Q9H2K8 898 aa24.68■■□□□ 1.54
FBXO28-205ENST00000523990 TRMT112Q9UI30 125 aaKnown RBP24.67■■□□□ 1.54
FBXO28-205ENST00000523990 C1QTNF8P60827 252 aa24.66■■□□□ 1.54
FBXO28-205ENST00000523990 CCDC93Q567U6 631 aa24.66■■□□□ 1.54
FBXO28-205ENST00000523990 NLRP3Q96P20 1036 aa24.66■■□□□ 1.54
FBXO28-205ENST00000523990 SPINK5Q9NQ38 1064 aaPredicted RBP24.66■■□□□ 1.54
FBXO28-205ENST00000523990 SH3TC1Q8TE82 1336 aa24.66■■□□□ 1.54
FBXO28-205ENST00000523990 CEP350Q5VT06 3117 aa24.65■■□□□ 1.54
FBXO28-205ENST00000523990 ATP5J2-PTCD1G3V325 749 aa24.65■■□□□ 1.54
FBXO28-205ENST00000523990 OLFM4Q6UX06 510 aa24.65■■□□□ 1.54
FBXO28-205ENST00000523990 RIC3Q7Z5B4 369 aa24.65■■□□□ 1.54
FBXO28-205ENST00000523990 SYNE4Q8N205 404 aa24.65■■□□□ 1.54
FBXO28-205ENST00000523990 ZNF521Q96K83 1311 aa24.64■■□□□ 1.54
FBXO28-205ENST00000523990 KIF3CO14782 793 aa24.63■■□□□ 1.53
FBXO28-205ENST00000523990 TRIM28Q13263 835 aaKnown RBP24.63■■□□□ 1.53
FBXO28-205ENST00000523990 ZNF428Q96B54 188 aa24.63■■□□□ 1.53
FBXO28-205ENST00000523990 CRAMP1Q96RY5 1269 aa24.63■■□□□ 1.53
FBXO28-205ENST00000523990 STK31Q9BXU1 1019 aa24.63■■□□□ 1.53
FBXO28-205ENST00000523990 HCLS1P14317 486 aaPredicted RBP24.62■■□□□ 1.53
FBXO28-205ENST00000523990 RBM17Q96I25 401 aaKnown RBP24.62■■□□□ 1.53
FBXO28-205ENST00000523990 LRRC37AA6NMS7 1700 aa24.61■■□□□ 1.53
FBXO28-205ENST00000523990 CCER2I3L3R5 266 aa24.61■■□□□ 1.53
FBXO28-205ENST00000523990 TCERG1O14776 1098 aaKnown RBP24.61■■□□□ 1.53
FBXO28-205ENST00000523990 DDX58O95786 925 aaKnown RBP24.61■■□□□ 1.53
FBXO28-205ENST00000523990 NMRK2Q9NPI5 230 aa24.61■■□□□ 1.53
FBXO28-205ENST00000523990 KDM2BQ8NHM5 1336 aa24.61■■□□□ 1.53
FBXO28-205ENST00000523990 MYH3P11055 1940 aa24.61■■□□□ 1.53
FBXO28-205ENST00000523990 FKBP4Q02790 459 aaKnown RBP eCLIP24.61■■□□□ 1.53
FBXO28-205ENST00000523990 EXOSC9Q06265 439 aaKnown RBP24.61■■□□□ 1.53
FBXO28-205ENST00000523990 WDR90Q96KV7 1748 aa24.6■■□□□ 1.53
FBXO28-205ENST00000523990 ABCC4O15439 1325 aa24.6■■□□□ 1.53
FBXO28-205ENST00000523990 RTKN2Q8IZC4 609 aa24.6■■□□□ 1.53
FBXO28-205ENST00000523990 FAM89AQ96GI7 184 aa24.6■■□□□ 1.53
FBXO28-205ENST00000523990 MYD88Q99836 296 aa24.6■■□□□ 1.53
FBXO28-205ENST00000523990 MYH16Q9H6N6 1097 aa24.6■■□□□ 1.53
FBXO28-205ENST00000523990 VAMP4O75379 141 aa24.59■■□□□ 1.53
FBXO28-205ENST00000523990 METTL22Q9BUU2 404 aaPredicted RBP24.59■■□□□ 1.53
FBXO28-205ENST00000523990 PPEF1O14829 653 aaPredicted RBP24.58■■□□□ 1.53
FBXO28-205ENST00000523990 SLC4A2P04920 1241 aa24.58■■□□□ 1.53
FBXO28-205ENST00000523990 G2E3Q7L622 706 aa24.58■■□□□ 1.53
FBXO28-205ENST00000523990 SLC51AQ86UW1 340 aa24.58■■□□□ 1.53
FBXO28-205ENST00000523990 MAP3K2Q9Y2U5 619 aa24.58■■□□□ 1.53
FBXO28-205ENST00000523990 COL4A1P02462 1669 aa24.57■■□□□ 1.52
FBXO28-205ENST00000523990 CC2D2BQ6DHV5 1058 aa24.57■■□□□ 1.52
FBXO28-205ENST00000523990 KSR2Q6VAB6 950 aa24.57■■□□□ 1.52
FBXO28-205ENST00000523990 CCDC191Q8NCU4 936 aa24.57■■□□□ 1.52
FBXO28-205ENST00000523990 PI4KAP2A4QPH2 592 aa24.56■■□□□ 1.52
FBXO28-205ENST00000523990 GLTPD2A6NH11 291 aa24.56■■□□□ 1.52
FBXO28-205ENST00000523990 PI4KAP1Q8N8J0 262 aa24.56■■□□□ 1.52
FBXO28-205ENST00000523990 RTL5Q5HYW3 569 aaPredicted RBP24.55■■□□□ 1.52
FBXO28-205ENST00000523990 ZBTB38Q8NAP3 1195 aaPredicted RBP24.55■■□□□ 1.52
FBXO28-205ENST00000523990 PSMD1Q99460 953 aa24.55■■□□□ 1.52
FBXO28-205ENST00000523990 ZNF277Q9NRM2 450 aaPredicted RBP24.55■■□□□ 1.52
FBXO28-205ENST00000523990 FLIIQ13045 1269 aa24.54■■□□□ 1.52
FBXO28-205ENST00000523990 CWC25Q9NXE8 425 aaPredicted RBP24.54■■□□□ 1.52
FBXO28-205ENST00000523990 COL4A5P29400 1685 aa24.54■■□□□ 1.52
FBXO28-205ENST00000523990 IRS4O14654 1257 aaPredicted RBP24.53■■□□□ 1.52
FBXO28-205ENST00000523990 DDX46Q7L014 1031 aaKnown RBP24.53■■□□□ 1.52
FBXO28-205ENST00000523990 IGKV5-2P06315 115 aa24.52■■□□□ 1.52
FBXO28-205ENST00000523990 SF3B3Q15393 1217 aaKnown RBP24.52■■□□□ 1.52
FBXO28-205ENST00000523990 GRIPAP1Q4V328 841 aa24.52■■□□□ 1.52
FBXO28-205ENST00000523990 ATP6V0A2Q9Y487 856 aa24.52■■□□□ 1.52
FBXO28-205ENST00000523990 IARSP41252 1262 aaKnown RBP24.52■■□□□ 1.52
FBXO28-205ENST00000523990 GRAPQ13588 217 aa24.52■■□□□ 1.52
FBXO28-205ENST00000523990 GRAPLQ8TC17 118 aaPredicted RBP24.52■■□□□ 1.52
FBXO28-205ENST00000523990 RRAGCQ9HB90 399 aa24.52■■□□□ 1.52
FBXO28-205ENST00000523990 LTBP1Q14766 1721 aa24.52■■□□□ 1.52
FBXO28-205ENST00000523990 DUOX1Q9NRD9 1551 aa24.51■■□□□ 1.51
FBXO28-205ENST00000523990 SCN4AP35499 1836 aa24.51■■□□□ 1.51
FBXO28-205ENST00000523990 PCCAP05165 728 aaPredicted RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms