RNA–Protein interactions for RNA: ENST00000523953.5

CA1-222, Transcript of carbonic anhydrase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CA1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CA1-222ENST00000523953 METTL22Q9BUU2 404 aaPredicted RBP8.29□□□□□ -1.08
CA1-222ENST00000523953 IFIT2P09913 472 aaKnown RBP8.28□□□□□ -1.08
CA1-222ENST00000523953 RBM33Q96EV2 1170 aaKnown RBP8.28□□□□□ -1.08
CA1-222ENST00000523953 ZSCAN31Q96LW9 406 aaPredicted RBP8.28□□□□□ -1.08
CA1-222ENST00000523953 LIMCH1Q9UPQ0 1083 aa8.28□□□□□ -1.08
CA1-222ENST00000523953 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.28□□□□□ -1.08
CA1-222ENST00000523953 NEURL1BA8MQ27 555 aa8.28□□□□□ -1.08
CA1-222ENST00000523953 PRPF40AO75400 957 aaKnown RBP8.28□□□□□ -1.08
CA1-222ENST00000523953 ANXA1P04083 346 aa8.28□□□□□ -1.08
CA1-222ENST00000523953 IGKV5-2P06315 115 aa8.28□□□□□ -1.08
CA1-222ENST00000523953 OS9Q13438 667 aaPredicted RBP8.28□□□□□ -1.08
CA1-222ENST00000523953 CAVIN1Q6NZI2 390 aaKnown RBP8.28□□□□□ -1.08
CA1-222ENST00000523953 LRSAM1Q6UWE0 723 aa8.28□□□□□ -1.08
CA1-222ENST00000523953 RASEFQ8IZ41 740 aa8.28□□□□□ -1.08
CA1-222ENST00000523953 PDLIM2Q96JY6 352 aa8.28□□□□□ -1.08
CA1-222ENST00000523953 ZSWIM6Q9HCJ5 1215 aa8.28□□□□□ -1.08
CA1-222ENST00000523953 COPRSQ9NQ92 184 aa8.28□□□□□ -1.08
CA1-222ENST00000523953 SH2B1Q9NRF2 756 aaPredicted RBP8.28□□□□□ -1.08
CA1-222ENST00000523953 DIAPH3Q9NSV4 1193 aa8.28□□□□□ -1.08
CA1-222ENST00000523953 MED23Q9ULK4 1368 aa8.28□□□□□ -1.08
CA1-222ENST00000523953 NUP188Q5SRE5 1749 aa8.28□□□□□ -1.08
CA1-222ENST00000523953 ESPNB1AK53 854 aa8.27□□□□□ -1.08
CA1-222ENST00000523953 SASH1O94885 1247 aa8.27□□□□□ -1.08
CA1-222ENST00000523953 NEXNQ0ZGT2 675 aa8.27□□□□□ -1.08
CA1-222ENST00000523953 RABL6Q3YEC7 729 aaPredicted RBP8.27□□□□□ -1.08
CA1-222ENST00000523953 ANP32BQ92688 251 aaKnown RBP8.27□□□□□ -1.08
CA1-222ENST00000523953 SYAP1Q96A49 352 aaPredicted RBP8.27□□□□□ -1.08
CA1-222ENST00000523953 BICC1Q9H694 974 aaKnown RBP8.27□□□□□ -1.08
CA1-222ENST00000523953 CCDC171Q6TFL3 1326 aa8.27□□□□□ -1.09
CA1-222ENST00000523953 AFDNP55196 1824 aaKnown RBP8.27□□□□□ -1.09
CA1-222ENST00000523953 ZBTB7CA1YPR0 619 aa8.27□□□□□ -1.09
CA1-222ENST00000523953 SNRPA1P09661 255 aaKnown RBP8.27□□□□□ -1.09
CA1-222ENST00000523953 G3BP1Q13283 466 aaKnown RBP eCLIP8.27□□□□□ -1.09
CA1-222ENST00000523953 GCKRQ14397 625 aa8.27□□□□□ -1.09
CA1-222ENST00000523953 NECTIN1Q15223 517 aa8.27□□□□□ -1.09
CA1-222ENST00000523953 CWF19L2Q2TBE0 894 aaKnown RBP8.27□□□□□ -1.09
CA1-222ENST00000523953 ATF3P18847 181 aa8.27□□□□□ -1.09
CA1-222ENST00000523953 TSGA10IPQ3SY00 556 aa8.27□□□□□ -1.09
CA1-222ENST00000523953 MAP4K1Q92918 833 aa8.27□□□□□ -1.09
CA1-222ENST00000523953 UPF3BQ9BZI7 483 aaKnown RBP8.27□□□□□ -1.09
CA1-222ENST00000523953 SPATA31A3Q5VYP0 1347 aa8.26□□□□□ -1.09
CA1-222ENST00000523953 PRAMEF22A3QJZ6 481 aa8.26□□□□□ -1.09
CA1-222ENST00000523953 PHF14O94880 888 aa8.26□□□□□ -1.09
CA1-222ENST00000523953 AK2P54819 239 aa8.26□□□□□ -1.09
CA1-222ENST00000523953 XPCQ01831 940 aaPredicted RBP8.26□□□□□ -1.09
CA1-222ENST00000523953 RUFY3Q7L099 469 aa8.26□□□□□ -1.09
CA1-222ENST00000523953 CADPS2Q86UW7 1296 aa8.26□□□□□ -1.09
CA1-222ENST00000523953 AACSQ86V21 672 aa8.26□□□□□ -1.09
CA1-222ENST00000523953 TRIM44Q96DX7 344 aaPredicted RBP8.26□□□□□ -1.09
CA1-222ENST00000523953 FMNL2Q96PY5 1086 aa8.26□□□□□ -1.09
CA1-222ENST00000523953 TMEM63CQ9P1W3 806 aa8.26□□□□□ -1.09
CA1-222ENST00000523953 ATP6V1DQ9Y5K8 247 aa8.26□□□□□ -1.09
CA1-222ENST00000523953 ZSCAN22P10073 491 aaPredicted RBP8.26□□□□□ -1.09
CA1-222ENST00000523953 NUBP1P53384 320 aa8.26□□□□□ -1.09
CA1-222ENST00000523953 CWC27Q6UX04 472 aaKnown RBP8.26□□□□□ -1.09
CA1-222ENST00000523953 RIC3Q7Z5B4 369 aa8.26□□□□□ -1.09
CA1-222ENST00000523953 EAF2Q96CJ1 260 aaPredicted RBP8.26□□□□□ -1.09
CA1-222ENST00000523953 XIRP1Q702N8 1843 aaKnown RBP8.25□□□□□ -1.09
CA1-222ENST00000523953 SPEF2Q9C093 1822 aa8.25□□□□□ -1.09
CA1-222ENST00000523953 TJP1Q07157 1748 aa8.25□□□□□ -1.09
CA1-222ENST00000523953 MAP4K4O95819 1239 aaPredicted RBP8.25□□□□□ -1.09
CA1-222ENST00000523953 RFX5P48382 616 aaPredicted RBP8.25□□□□□ -1.09
CA1-222ENST00000523953 SPOCK2Q92563 424 aa8.25□□□□□ -1.09
CA1-222ENST00000523953 HMG20BQ9P0W2 317 aa8.25□□□□□ -1.09
CA1-222ENST00000523953 PA2G4Q9UQ80 394 aaKnown RBP8.25□□□□□ -1.09
CA1-222ENST00000523953 ABCA3Q99758 1704 aa8.25□□□□□ -1.09
CA1-222ENST00000523953 KCPQ6ZWJ8 1503 aa8.25□□□□□ -1.09
CA1-222ENST00000523953 LETM1O95202 739 aaPredicted RBP8.25□□□□□ -1.09
CA1-222ENST00000523953 ATP5JP18859 108 aa8.25□□□□□ -1.09
CA1-222ENST00000523953 PSMA5P28066 241 aa8.25□□□□□ -1.09
CA1-222ENST00000523953 XAGE3Q8WTP9 111 aa8.25□□□□□ -1.09
CA1-222ENST00000523953 ZNF496Q96IT1 587 aaPredicted RBP8.25□□□□□ -1.09
CA1-222ENST00000523953 RBSNQ9H1K0 784 aa8.25□□□□□ -1.09
CA1-222ENST00000523953 CYP46A1Q9Y6A2 500 aa8.25□□□□□ -1.09
CA1-222ENST00000523953 TNS2Q63HR2 1409 aa8.25□□□□□ -1.09
CA1-222ENST00000523953 CYP27B1O15528 508 aa8.24□□□□□ -1.09
CA1-222ENST00000523953 ZKSCAN1P17029 563 aaPredicted RBP8.24□□□□□ -1.09
CA1-222ENST00000523953 PRIM1P49642 420 aaKnown RBP8.24□□□□□ -1.09
CA1-222ENST00000523953 CASP7P55210 303 aa8.24□□□□□ -1.09
CA1-222ENST00000523953 PTH1RQ03431 593 aa8.24□□□□□ -1.09
CA1-222ENST00000523953 ANKRD1Q15327 319 aa8.24□□□□□ -1.09
CA1-222ENST00000523953 CSPP1Q1MSJ5 1256 aa8.24□□□□□ -1.09
CA1-222ENST00000523953 USPL1Q5W0Q7 1092 aa8.24□□□□□ -1.09
CA1-222ENST00000523953 ANKRD13DQ6ZTN6 518 aa8.24□□□□□ -1.09
CA1-222ENST00000523953 PDRG1Q9NUG6 133 aa8.24□□□□□ -1.09
CA1-222ENST00000523953 NLRP2Q9NX02 1062 aa8.24□□□□□ -1.09
CA1-222ENST00000523953 SHANK3Q9BYB0 1731 aa8.24□□□□□ -1.09
CA1-222ENST00000523953 STX6O43752 255 aa8.24□□□□□ -1.09
CA1-222ENST00000523953 MCM5P33992 734 aa8.24□□□□□ -1.09
CA1-222ENST00000523953 ZC3H6P61129 1189 aaKnown RBP8.24□□□□□ -1.09
CA1-222ENST00000523953 NKX1-1Q15270 411 aaPredicted RBP8.24□□□□□ -1.09
CA1-222ENST00000523953 RNF20Q5VTR2 975 aa8.24□□□□□ -1.09
CA1-222ENST00000523953 CREB3L3Q68CJ9 461 aa8.24□□□□□ -1.09
CA1-222ENST00000523953 LMOD2Q6P5Q4 547 aa8.24□□□□□ -1.09
CA1-222ENST00000523953 COPS6Q7L5N1 327 aa8.24□□□□□ -1.09
CA1-222ENST00000523953 ZSCAN30Q86W11 494 aa8.24□□□□□ -1.09
CA1-222ENST00000523953 TTC5Q8N0Z6 440 aa8.24□□□□□ -1.09
CA1-222ENST00000523953 FAM184AQ8NB25 1140 aa8.24□□□□□ -1.09
CA1-222ENST00000523953 NFATC2IPQ8NCF5 419 aa8.24□□□□□ -1.09
CA1-222ENST00000523953 PLBD2Q8NHP8 589 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms