RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 FZD9O00144 591 aa12.54□□□□□ -0.4
PTPN12-216ENST00000523952 OLFM4Q6UX06 510 aa12.54□□□□□ -0.4
PTPN12-216ENST00000523952 CLEC4GQ6UXB4 293 aa12.54□□□□□ -0.4
PTPN12-216ENST00000523952 GAS2L2Q8NHY3 880 aa12.54□□□□□ -0.4
PTPN12-216ENST00000523952 C7orf43Q8WVR3 580 aa12.54□□□□□ -0.4
PTPN12-216ENST00000523952 NIP7Q9Y221 180 aaKnown RBP eCLIP12.54□□□□□ -0.4
PTPN12-216ENST00000523952 BTBD11A6QL63 1104 aa12.53□□□□□ -0.4
PTPN12-216ENST00000523952 U2SURPO15042 1029 aaKnown RBP12.53□□□□□ -0.4
PTPN12-216ENST00000523952 CA12O43570 354 aa12.53□□□□□ -0.4
PTPN12-216ENST00000523952 PIP4K2AP48426 406 aaPredicted RBP12.53□□□□□ -0.4
PTPN12-216ENST00000523952 REM2Q8IYK8 340 aaPredicted RBP12.53□□□□□ -0.4
PTPN12-216ENST00000523952 MAP2K2P36507 400 aa12.52□□□□□ -0.41
PTPN12-216ENST00000523952 LARGE2Q8N3Y3 721 aa12.52□□□□□ -0.41
PTPN12-216ENST00000523952 MCOLN1Q9GZU1 580 aa12.52□□□□□ -0.41
PTPN12-216ENST00000523952 TMX4Q9H1E5 349 aaPredicted RBP12.52□□□□□ -0.41
PTPN12-216ENST00000523952 TIMELESSQ9UNS1 1208 aa12.52□□□□□ -0.41
PTPN12-216ENST00000523952 DLG5Q8TDM6 1919 aa12.51□□□□□ -0.41
PTPN12-216ENST00000523952 AOC2O75106 756 aa12.51□□□□□ -0.41
PTPN12-216ENST00000523952 HSPA5P11021 654 aaKnown RBP12.51□□□□□ -0.41
PTPN12-216ENST00000523952 DGKZQ13574 1117 aa12.51□□□□□ -0.41
PTPN12-216ENST00000523952 USP50Q70EL3 339 aaPredicted RBP12.51□□□□□ -0.41
PTPN12-216ENST00000523952 RPGRQ92834 1020 aaKnown RBP12.51□□□□□ -0.41
PTPN12-216ENST00000523952 PSMD1Q99460 953 aa12.51□□□□□ -0.41
PTPN12-216ENST00000523952 TLL2Q9Y6L7 1015 aa12.51□□□□□ -0.41
PTPN12-216ENST00000523952 TRAF5O00463 557 aa12.5□□□□□ -0.41
PTPN12-216ENST00000523952 FMR1Q06787 632 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTPN12-216ENST00000523952 CC2D2BQ6DHV5 1058 aa12.5□□□□□ -0.41
PTPN12-216ENST00000523952 NIM1KQ8IY84 436 aa12.5□□□□□ -0.41
PTPN12-216ENST00000523952 IL17REQ8NFR9 667 aa12.5□□□□□ -0.41
PTPN12-216ENST00000523952 LAMB2P55268 1798 aa12.49□□□□□ -0.41
PTPN12-216ENST00000523952 KLRG2A4D1S0 409 aaPredicted RBP12.49□□□□□ -0.41
PTPN12-216ENST00000523952 CELF2O95319 508 aaKnown RBP12.49□□□□□ -0.41
PTPN12-216ENST00000523952 EPS15P42566 896 aa12.49□□□□□ -0.41
PTPN12-216ENST00000523952 GRIPAP1Q4V328 841 aa12.49□□□□□ -0.41
PTPN12-216ENST00000523952 NYXQ9GZU5 481 aa12.49□□□□□ -0.41
PTPN12-216ENST00000523952 ZNF408Q9H9D4 720 aa12.49□□□□□ -0.41
PTPN12-216ENST00000523952 USP16Q9Y5T5 823 aa12.49□□□□□ -0.41
PTPN12-216ENST00000523952 SNRPA1P09661 255 aaKnown RBP12.48□□□□□ -0.41
PTPN12-216ENST00000523952 SCNN1DP51172 638 aa12.48□□□□□ -0.41
PTPN12-216ENST00000523952 CST9Q5W186 159 aa12.48□□□□□ -0.41
PTPN12-216ENST00000523952 COL4A5P29400 1685 aa12.48□□□□□ -0.41
PTPN12-216ENST00000523952 TCERG1O14776 1098 aaKnown RBP12.47□□□□□ -0.41
PTPN12-216ENST00000523952 KCNQ3O43525 872 aa12.47□□□□□ -0.41
PTPN12-216ENST00000523952 BRPF1P55201 1214 aaPredicted RBP12.47□□□□□ -0.41
PTPN12-216ENST00000523952 CNGB1Q14028 1251 aaPredicted RBP12.47□□□□□ -0.41
PTPN12-216ENST00000523952 CC2D1BQ5T0F9 858 aaKnown RBP12.47□□□□□ -0.41
PTPN12-216ENST00000523952 RTF1Q92541 710 aaKnown RBP12.47□□□□□ -0.41
PTPN12-216ENST00000523952 ADARB2Q9NS39 739 aaKnown RBP12.47□□□□□ -0.41
PTPN12-216ENST00000523952 ANKRD36CQ5JPF3 1778 aa12.47□□□□□ -0.41
PTPN12-216ENST00000523952 TAF1P21675 1872 aa12.46□□□□□ -0.41
PTPN12-216ENST00000523952 PPIP5K2O43314 1243 aa12.46□□□□□ -0.41
PTPN12-216ENST00000523952 CIAPIN1Q6FI81 312 aa12.46□□□□□ -0.41
PTPN12-216ENST00000523952 SAPCD2Q86UD0 394 aa12.46□□□□□ -0.41
PTPN12-216ENST00000523952 RBM17Q96I25 401 aaKnown RBP12.46□□□□□ -0.41
PTPN12-216ENST00000523952 ZBTB12Q9Y330 459 aaPredicted RBP12.46□□□□□ -0.41
PTPN12-216ENST00000523952 PPEF1O14829 653 aaPredicted RBP12.45□□□□□ -0.42
PTPN12-216ENST00000523952 RGL2O15211 777 aa12.45□□□□□ -0.42
PTPN12-216ENST00000523952 AMER1Q5JTC6 1135 aaPredicted RBP12.45□□□□□ -0.42
PTPN12-216ENST00000523952 NUTM1Q86Y26 1132 aa12.45□□□□□ -0.42
PTPN12-216ENST00000523952 NGEFQ8N5V2 710 aa12.45□□□□□ -0.42
PTPN12-216ENST00000523952 BCL2L13Q9BXK5 485 aa12.45□□□□□ -0.42
PTPN12-216ENST00000523952 KDM3BQ7LBC6 1761 aa12.45□□□□□ -0.42
PTPN12-216ENST00000523952 DDX60Q8IY21 1712 aaKnown RBP12.45□□□□□ -0.42
PTPN12-216ENST00000523952 CEMIPQ8WUJ3 1361 aa12.44□□□□□ -0.42
PTPN12-216ENST00000523952 PRAMEF22A3QJZ6 481 aa12.44□□□□□ -0.42
PTPN12-216ENST00000523952 PITPNM1O00562 1244 aa12.44□□□□□ -0.42
PTPN12-216ENST00000523952 NOGQ13253 232 aa12.44□□□□□ -0.42
PTPN12-216ENST00000523952 KIF6Q6ZMV9 814 aa12.44□□□□□ -0.42
PTPN12-216ENST00000523952 HHIPL1Q96JK4 782 aa12.44□□□□□ -0.42
PTPN12-216ENST00000523952 GLIS2Q9BZE0 524 aaPredicted RBP12.44□□□□□ -0.42
PTPN12-216ENST00000523952 GPRC5DQ9NZD1 345 aa12.44□□□□□ -0.42
PTPN12-216ENST00000523952 COL3A1P02461 1466 aaPredicted RBP12.43□□□□□ -0.42
PTPN12-216ENST00000523952 HLFQ16534 295 aa12.43□□□□□ -0.42
PTPN12-216ENST00000523952 AOC3Q16853 763 aa12.43□□□□□ -0.42
PTPN12-216ENST00000523952 SUPT20HQ8NEM7 779 aa12.43□□□□□ -0.42
PTPN12-216ENST00000523952 SNED1Q8TER0 1413 aa12.43□□□□□ -0.42
PTPN12-216ENST00000523952 ABCC12Q96J65 1359 aa12.43□□□□□ -0.42
PTPN12-216ENST00000523952 PRKAR2BP31323 418 aa12.42□□□□□ -0.42
PTPN12-216ENST00000523952 SOX10P56693 466 aa12.42□□□□□ -0.42
PTPN12-216ENST00000523952 CRY2Q49AN0 593 aa12.42□□□□□ -0.42
PTPN12-216ENST00000523952 CFAP53Q96M91 514 aa12.42□□□□□ -0.42
PTPN12-216ENST00000523952 NPC1L1Q9UHC9 1359 aa12.42□□□□□ -0.42
PTPN12-216ENST00000523952 NBPF26B4DH59 902 aa12.41□□□□□ -0.42
PTPN12-216ENST00000523952 GPTP24298 496 aa12.41□□□□□ -0.42
PTPN12-216ENST00000523952 GMPSP49915 693 aaPredicted RBP12.41□□□□□ -0.42
PTPN12-216ENST00000523952 HUNKP57058 714 aa12.41□□□□□ -0.42
PTPN12-216ENST00000523952 TNIP1Q15025 636 aa12.41□□□□□ -0.42
PTPN12-216ENST00000523952 NBPF10Q6P3W6 841 aaKnown RBP12.41□□□□□ -0.42
PTPN12-216ENST00000523952 CDC37L1Q7L3B6 337 aa12.41□□□□□ -0.42
PTPN12-216ENST00000523952 NBPF15Q8N660 670 aa12.41□□□□□ -0.42
PTPN12-216ENST00000523952 CRAMP1Q96RY5 1269 aa12.41□□□□□ -0.42
PTPN12-216ENST00000523952 VPS33BQ9H267 617 aa12.41□□□□□ -0.42
PTPN12-216ENST00000523952 ZNRF3Q9ULT6 936 aa12.41□□□□□ -0.42
PTPN12-216ENST00000523952 KIF7Q2M1P5 1343 aa12.4□□□□□ -0.42
PTPN12-216ENST00000523952 CDHR2Q9BYE9 1310 aa12.4□□□□□ -0.42
PTPN12-216ENST00000523952 RIC1Q4ADV7 1423 aa12.4□□□□□ -0.42
PTPN12-216ENST00000523952 HOXA10P31260 410 aaPredicted RBP12.4□□□□□ -0.42
PTPN12-216ENST00000523952 FXR2P51116 673 aaKnown RBP eCLIP12.4□□□□□ -0.42
PTPN12-216ENST00000523952 MCM10Q7L590 875 aa12.4□□□□□ -0.42
PTPN12-216ENST00000523952 ZC3H15Q8WU90 426 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms