RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 ABCC12Q96J65 1359 aa16.06■□□□□ 0.16
VEGFA-225ENST00000523950 FAM177BA6PVY3 158 aa16.06■□□□□ 0.16
VEGFA-225ENST00000523950 TCERG1O14776 1098 aaKnown RBP16.06■□□□□ 0.16
VEGFA-225ENST00000523950 STYK1Q6J9G0 422 aa16.06■□□□□ 0.16
VEGFA-225ENST00000523950 METTL22Q9BUU2 404 aaPredicted RBP16.06■□□□□ 0.16
VEGFA-225ENST00000523950 BCS1LQ9Y276 419 aa16.06■□□□□ 0.16
VEGFA-225ENST00000523950 ADCY9O60503 1353 aa16.05■□□□□ 0.16
VEGFA-225ENST00000523950 ZBED9Q6R2W3 1325 aa16.05■□□□□ 0.16
VEGFA-225ENST00000523950 SH3TC1Q8TE82 1336 aa16.05■□□□□ 0.16
VEGFA-225ENST00000523950 SRGNP10124 158 aa16.05■□□□□ 0.16
VEGFA-225ENST00000523950 ERFEQ4G0M1 354 aa16.05■□□□□ 0.16
VEGFA-225ENST00000523950 SLC10A5Q5PT55 438 aa16.05■□□□□ 0.16
VEGFA-225ENST00000523950 NUTM1Q86Y26 1132 aa16.05■□□□□ 0.16
VEGFA-225ENST00000523950 CCDC24Q8N4L8 307 aa16.05■□□□□ 0.16
VEGFA-225ENST00000523950 TTLL6Q8N841 843 aa16.05■□□□□ 0.16
VEGFA-225ENST00000523950 CNKSR1Q969H4 720 aa16.05■□□□□ 0.16
VEGFA-225ENST00000523950 MASTLQ96GX5 879 aa16.05■□□□□ 0.16
VEGFA-225ENST00000523950 LAMB2P55268 1798 aa16.05■□□□□ 0.16
VEGFA-225ENST00000523950 PI4KAP2A4QPH2 592 aa16.04■□□□□ 0.16
VEGFA-225ENST00000523950 NPR1P16066 1061 aa16.04■□□□□ 0.16
VEGFA-225ENST00000523950 NEXNQ0ZGT2 675 aa16.04■□□□□ 0.16
VEGFA-225ENST00000523950 FKBP5Q13451 457 aaPredicted RBP16.04■□□□□ 0.16
VEGFA-225ENST00000523950 G2E3Q7L622 706 aa16.04■□□□□ 0.16
VEGFA-225ENST00000523950 PI4KAP1Q8N8J0 262 aa16.04■□□□□ 0.16
VEGFA-225ENST00000523950 CCDC191Q8NCU4 936 aa16.04■□□□□ 0.16
VEGFA-225ENST00000523950 MAP3K2Q9Y2U5 619 aa16.04■□□□□ 0.16
VEGFA-225ENST00000523950 ALDH1L2Q3SY69 923 aa16.03■□□□□ 0.16
VEGFA-225ENST00000523950 CRY2Q49AN0 593 aa16.03■□□□□ 0.16
VEGFA-225ENST00000523950 ZNF622Q969S3 477 aaKnown RBP eCLIP16.03■□□□□ 0.162e-16■□□□□ 8.9
VEGFA-225ENST00000523950 NLRP3Q96P20 1036 aa16.03■□□□□ 0.16
VEGFA-225ENST00000523950 MYD88Q99836 296 aa16.03■□□□□ 0.16
VEGFA-225ENST00000523950 TRMT112Q9UI30 125 aaKnown RBP16.03■□□□□ 0.16
VEGFA-225ENST00000523950 CACNA1SQ13698 1873 aa16.03■□□□□ 0.16
VEGFA-225ENST00000523950 DDX60Q8IY21 1712 aaKnown RBP16.02■□□□□ 0.16
VEGFA-225ENST00000523950 ATP5J2-PTCD1G3V325 749 aa16.02■□□□□ 0.16
VEGFA-225ENST00000523950 HSP90B1P14625 803 aaKnown RBP16.02■□□□□ 0.16
VEGFA-225ENST00000523950 CWC25Q9NXE8 425 aaPredicted RBP16.02■□□□□ 0.16
VEGFA-225ENST00000523950 ALDH1B1P30837 517 aa16.01■□□□□ 0.15
VEGFA-225ENST00000523950 ZBTB38Q8NAP3 1195 aaPredicted RBP16.01■□□□□ 0.15
VEGFA-225ENST00000523950 DNAAF4Q8WXU2 420 aa16.01■□□□□ 0.15
VEGFA-225ENST00000523950 WWC3Q9ULE0 1092 aa16.01■□□□□ 0.15
VEGFA-225ENST00000523950 HOXA10P31260 410 aaPredicted RBP16■□□□□ 0.15
VEGFA-225ENST00000523950 SOGA3Q5TF21 947 aa16■□□□□ 0.15
VEGFA-225ENST00000523950 RPGRQ92834 1020 aaKnown RBP16■□□□□ 0.15
VEGFA-225ENST00000523950 PTPRCP08575 1304 aa15.99■□□□□ 0.15
VEGFA-225ENST00000523950 SLX4Q8IY92 1834 aa15.99■□□□□ 0.15
VEGFA-225ENST00000523950 PCCAP05165 728 aaPredicted RBP15.99■□□□□ 0.15
VEGFA-225ENST00000523950 MRPL50Q8N5N7 158 aaKnown RBP15.99■□□□□ 0.15
VEGFA-225ENST00000523950 LINS1Q8NG48 757 aa15.99■□□□□ 0.15
VEGFA-225ENST00000523950 SSH1Q8WYL5 1049 aa15.99■□□□□ 0.15
VEGFA-225ENST00000523950 NEURL1BA8MQ27 555 aa15.98■□□□□ 0.15
VEGFA-225ENST00000523950 IGKV5-2P06315 115 aa15.98■□□□□ 0.15
VEGFA-225ENST00000523950 BRPF1P55201 1214 aaPredicted RBP15.98■□□□□ 0.15
VEGFA-225ENST00000523950 PRPF40BQ6NWY9 871 aaKnown RBP15.98■□□□□ 0.15
VEGFA-225ENST00000523950 FAM89AQ96GI7 184 aa15.98■□□□□ 0.15
VEGFA-225ENST00000523950 RBM17Q96I25 401 aaKnown RBP15.98■□□□□ 0.15
VEGFA-225ENST00000523950 CRAMP1Q96RY5 1269 aa15.98■□□□□ 0.15
VEGFA-225ENST00000523950 CDHR2Q9BYE9 1310 aa15.97■□□□□ 0.15
VEGFA-225ENST00000523950 FER1L6Q2WGJ9 1857 aa15.97■□□□□ 0.15
VEGFA-225ENST00000523950 ARHGAP27Q6ZUM4 889 aa15.97■□□□□ 0.15
VEGFA-225ENST00000523950 MYH3P11055 1940 aa15.96■□□□□ 0.15
VEGFA-225ENST00000523950 IRS4O14654 1257 aaPredicted RBP15.96■□□□□ 0.15
VEGFA-225ENST00000523950 HCLS1P14317 486 aaPredicted RBP15.96■□□□□ 0.15
VEGFA-225ENST00000523950 SF3B3Q15393 1217 aaKnown RBP15.96■□□□□ 0.15
VEGFA-225ENST00000523950 SMC4Q9NTJ3 1288 aa15.96■□□□□ 0.15
VEGFA-225ENST00000523950 YY1P25490 414 aa15.95■□□□□ 0.14
VEGFA-225ENST00000523950 GCKRQ14397 625 aa15.95■□□□□ 0.14
VEGFA-225ENST00000523950 CWF19L2Q2TBE0 894 aaKnown RBP15.95■□□□□ 0.14
VEGFA-225ENST00000523950 GRIPAP1Q4V328 841 aa15.95■□□□□ 0.14
VEGFA-225ENST00000523950 CC2D2BQ6DHV5 1058 aa15.95■□□□□ 0.14
VEGFA-225ENST00000523950 SYNE4Q8N205 404 aa15.95■□□□□ 0.14
VEGFA-225ENST00000523950 SBF1O95248 1867 aa15.95■□□□□ 0.14
VEGFA-225ENST00000523950 C21orf2O43822 256 aa15.94■□□□□ 0.14
VEGFA-225ENST00000523950 PDE8AO60658 829 aa15.94■□□□□ 0.14
VEGFA-225ENST00000523950 ALDH1L1O75891 902 aa15.94■□□□□ 0.14
VEGFA-225ENST00000523950 CCDC93Q567U6 631 aa15.94■□□□□ 0.14
VEGFA-225ENST00000523950 BEND3Q5T5X7 828 aa15.94■□□□□ 0.14
VEGFA-225ENST00000523950 C3orf67Q6ZVT6 689 aa15.94■□□□□ 0.14
VEGFA-225ENST00000523950 DDX46Q7L014 1031 aaKnown RBP15.94■□□□□ 0.14
VEGFA-225ENST00000523950 C7orf43Q8WVR3 580 aa15.94■□□□□ 0.14
VEGFA-225ENST00000523950 KIF16BQ96L93 1317 aa15.94■□□□□ 0.14
VEGFA-225ENST00000523950 LTBP3Q9NS15 1303 aa15.94■□□□□ 0.14
VEGFA-225ENST00000523950 F6X3S4 739 aa15.93■□□□□ 0.14
VEGFA-225ENST00000523950 H7C1W4 665 aa15.93■□□□□ 0.14
VEGFA-225ENST00000523950 RARSP54136 660 aaKnown RBP15.93■□□□□ 0.14
VEGFA-225ENST00000523950 TMC4Q7Z404 712 aa15.93■□□□□ 0.14
VEGFA-225ENST00000523950 ABCC4O15439 1325 aa15.93■□□□□ 0.14
VEGFA-225ENST00000523950 BBOX1O75936 387 aa15.92■□□□□ 0.14
VEGFA-225ENST00000523950 RTL5Q5HYW3 569 aaPredicted RBP15.92■□□□□ 0.14
VEGFA-225ENST00000523950 BCL2L13Q9BXK5 485 aa15.92■□□□□ 0.14
VEGFA-225ENST00000523950 SRCIN1Q9C0H9 1055 aa15.92■□□□□ 0.14
VEGFA-225ENST00000523950 TMX4Q9H1E5 349 aaPredicted RBP15.92■□□□□ 0.14
VEGFA-225ENST00000523950 GOLGB1Q14789 3259 aaKnown RBP15.91■□□□□ 0.14
VEGFA-225ENST00000523950 PPEF1O14829 653 aaPredicted RBP15.91■□□□□ 0.14
VEGFA-225ENST00000523950 GRAPQ13588 217 aa15.91■□□□□ 0.14
VEGFA-225ENST00000523950 CCDC152Q4G0S7 254 aa15.91■□□□□ 0.14
VEGFA-225ENST00000523950 RTKN2Q8IZC4 609 aa15.91■□□□□ 0.14
VEGFA-225ENST00000523950 GRAPLQ8TC17 118 aaPredicted RBP15.91■□□□□ 0.14
VEGFA-225ENST00000523950 PLA2G12BQ9BX93 195 aa15.91■□□□□ 0.14
VEGFA-225ENST00000523950 API5Q9BZZ5 524 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms