RNA–Protein interactions for RNA: ENST00000523720.1

R3HCC1-209, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 5

Gene R3HCC1, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-209ENST00000523720 SUSD4Q5VX71 490 aa15.33■□□□□ 0.04
R3HCC1-209ENST00000523720 COPS6Q7L5N1 327 aa15.33■□□□□ 0.04
R3HCC1-209ENST00000523720 XAGE3Q8WTP9 111 aa15.33■□□□□ 0.04
R3HCC1-209ENST00000523720 RPGRQ92834 1020 aaKnown RBP15.33■□□□□ 0.04
R3HCC1-209ENST00000523720 DBF4Q9UBU7 674 aaPredicted RBP15.33■□□□□ 0.04
R3HCC1-209ENST00000523720 TOMM70O94826 608 aa15.32■□□□□ 0.04
R3HCC1-209ENST00000523720 ZNF853P0CG23 659 aa15.32■□□□□ 0.04
R3HCC1-209ENST00000523720 PRELPP51888 382 aa15.32■□□□□ 0.04
R3HCC1-209ENST00000523720 AIMP1Q12904 312 aaKnown RBP15.32■□□□□ 0.04
R3HCC1-209ENST00000523720 DUSP27Q5VZP5 1158 aa15.32■□□□□ 0.04
R3HCC1-209ENST00000523720 UTP14AQ9BVJ6 771 aaKnown RBP15.32■□□□□ 0.04
R3HCC1-209ENST00000523720 HYPKQ9NX55 129 aa15.31■□□□□ 0.04
R3HCC1-209ENST00000523720 SCN4AP35499 1836 aa15.31■□□□□ 0.04
R3HCC1-209ENST00000523720 CACNA1FO60840 1977 aa15.31■□□□□ 0.04
R3HCC1-209ENST00000523720 GLTPD2A6NH11 291 aa15.3■□□□□ 0.04
R3HCC1-209ENST00000523720 HSPA6P17066 643 aa15.3■□□□□ 0.04
R3HCC1-209ENST00000523720 FKBP4Q02790 459 aaKnown RBP eCLIP15.3■□□□□ 0.04
R3HCC1-209ENST00000523720 RTKN2Q8IZC4 609 aa15.3■□□□□ 0.04
R3HCC1-209ENST00000523720 RBM46Q8TBY0 533 aaKnown RBP15.3■□□□□ 0.04
R3HCC1-209ENST00000523720 CHMP4AQ9BY43 222 aa15.3■□□□□ 0.04
R3HCC1-209ENST00000523720 LRRC37AA6NMS7 1700 aa15.29■□□□□ 0.04
R3HCC1-209ENST00000523720 CCDC27Q2M243 656 aa15.29■□□□□ 0.04
R3HCC1-209ENST00000523720 PLBD2Q8NHP8 589 aa15.29■□□□□ 0.04
R3HCC1-209ENST00000523720 C7orf43Q8WVR3 580 aa15.29■□□□□ 0.04
R3HCC1-209ENST00000523720 RBM17Q96I25 401 aaKnown RBP15.29■□□□□ 0.04
R3HCC1-209ENST00000523720 SNED1Q8TER0 1413 aa15.28■□□□□ 0.04
R3HCC1-209ENST00000523720 HOXA10P31260 410 aaPredicted RBP15.28■□□□□ 0.04
R3HCC1-209ENST00000523720 TCIRG1Q13488 830 aa15.28■□□□□ 0.04
R3HCC1-209ENST00000523720 DPY19L2Q6NUT2 758 aa15.28■□□□□ 0.04
R3HCC1-209ENST00000523720 NLRP10Q86W26 655 aa15.28■□□□□ 0.04
R3HCC1-209ENST00000523720 SH3TC1Q8TE82 1336 aa15.27■□□□□ 0.04
R3HCC1-209ENST00000523720 PPEF1O14829 653 aaPredicted RBP15.27■□□□□ 0.04
R3HCC1-209ENST00000523720 GOLGA2Q08379 1002 aa15.27■□□□□ 0.04
R3HCC1-209ENST00000523720 CC2D2BQ6DHV5 1058 aa15.27■□□□□ 0.04
R3HCC1-209ENST00000523720 NLRP3Q96P20 1036 aa15.27■□□□□ 0.04
R3HCC1-209ENST00000523720 CRAMP1Q96RY5 1269 aa15.27■□□□□ 0.04
R3HCC1-209ENST00000523720 RRAGCQ9HB90 399 aa15.27■□□□□ 0.04
R3HCC1-209ENST00000523720 MYH3P11055 1940 aa15.27■□□□□ 0.03
R3HCC1-209ENST00000523720 FSTL1Q12841 308 aa15.26■□□□□ 0.03
R3HCC1-209ENST00000523720 GRIPAP1Q4V328 841 aa15.26■□□□□ 0.03
R3HCC1-209ENST00000523720 NCBP3Q53F19 620 aaKnown RBP15.26■□□□□ 0.03
R3HCC1-209ENST00000523720 ANKRD13DQ6ZTN6 518 aa15.26■□□□□ 0.03
R3HCC1-209ENST00000523720 TRMT112Q9UI30 125 aaKnown RBP15.26■□□□□ 0.03
R3HCC1-209ENST00000523720 TAF1P21675 1872 aa15.26■□□□□ 0.03
R3HCC1-209ENST00000523720 IL16Q14005 1332 aa15.25■□□□□ 0.03
R3HCC1-209ENST00000523720 VEGFAP15692 232 aaPredicted RBP15.25■□□□□ 0.03
R3HCC1-209ENST00000523720 SLC10A5Q5PT55 438 aa15.25■□□□□ 0.03
R3HCC1-209ENST00000523720 CCDC30Q5VVM6 783 aa15.25■□□□□ 0.03
R3HCC1-209ENST00000523720 PSMD1Q99460 953 aa15.25■□□□□ 0.03
R3HCC1-209ENST00000523720 TMX4Q9H1E5 349 aaPredicted RBP15.25■□□□□ 0.03
R3HCC1-209ENST00000523720 ZNF277Q9NRM2 450 aaPredicted RBP15.25■□□□□ 0.03
R3HCC1-209ENST00000523720 ABCC4O15439 1325 aa15.24■□□□□ 0.03
R3HCC1-209ENST00000523720 ELL2O00472 640 aaPredicted RBP15.24■□□□□ 0.03
R3HCC1-209ENST00000523720 IARSP41252 1262 aaKnown RBP15.24■□□□□ 0.03
R3HCC1-209ENST00000523720 APLP1P51693 650 aa15.24■□□□□ 0.03
R3HCC1-209ENST00000523720 OLFM4Q6UX06 510 aa15.24■□□□□ 0.03
R3HCC1-209ENST00000523720 C3orf67Q6ZVT6 689 aa15.24■□□□□ 0.03
R3HCC1-209ENST00000523720 WWC1Q8IX03 1113 aa15.24■□□□□ 0.03
R3HCC1-209ENST00000523720 SMC1BQ8NDV3 1235 aa15.24■□□□□ 0.03
R3HCC1-209ENST00000523720 C8orf58Q8NAV2 365 aa15.23■□□□□ 0.03
R3HCC1-209ENST00000523720 TSR2Q969E8 191 aaKnown RBP15.23■□□□□ 0.03
R3HCC1-209ENST00000523720 ISCA1Q9BUE6 129 aa15.23■□□□□ 0.03
R3HCC1-209ENST00000523720 DDX58O95786 925 aaKnown RBP15.22■□□□□ 0.03
R3HCC1-209ENST00000523720 HCLS1P14317 486 aaPredicted RBP15.22■□□□□ 0.03
R3HCC1-209ENST00000523720 RIC3Q7Z5B4 369 aa15.22■□□□□ 0.03
R3HCC1-209ENST00000523720 SYNE4Q8N205 404 aa15.22■□□□□ 0.03
R3HCC1-209ENST00000523720 STK31Q9BXU1 1019 aa15.22■□□□□ 0.03
R3HCC1-209ENST00000523720 IQCA1LA6NCM1 817 aa15.21■□□□□ 0.03
R3HCC1-209ENST00000523720 ATP5J2-PTCD1G3V325 749 aa15.21■□□□□ 0.03
R3HCC1-209ENST00000523720 DDX46Q7L014 1031 aaKnown RBP15.21■□□□□ 0.03
R3HCC1-209ENST00000523720 JDP2Q8WYK2 163 aa15.21■□□□□ 0.03
R3HCC1-209ENST00000523720 SPEF2Q9C093 1822 aa15.21■□□□□ 0.03
R3HCC1-209ENST00000523720 COL4A5P29400 1685 aa15.21■□□□□ 0.03
R3HCC1-209ENST00000523720 LTBP1Q14766 1721 aa15.2■□□□□ 0.02
R3HCC1-209ENST00000523720 ZNF541Q9H0D2 1346 aa15.2■□□□□ 0.02
R3HCC1-209ENST00000523720 FANCIQ9NVI1 1328 aa15.2■□□□□ 0.02
R3HCC1-209ENST00000523720 DDNO94850 711 aaPredicted RBP15.2■□□□□ 0.02
R3HCC1-209ENST00000523720 HSP90B1P14625 803 aaKnown RBP15.2■□□□□ 0.02
R3HCC1-209ENST00000523720 TMC4Q7Z404 712 aa15.2■□□□□ 0.02
R3HCC1-209ENST00000523720 L3MBTL3Q96JM7 780 aaPredicted RBP15.2■□□□□ 0.02
R3HCC1-209ENST00000523720 PHAXQ9H814 394 aaKnown RBP15.2■□□□□ 0.02
R3HCC1-209ENST00000523720 ATP6V0A2Q9Y487 856 aa15.2■□□□□ 0.02
R3HCC1-209ENST00000523720 ADAMTSL1Q8N6G6 1762 aa15.2■□□□□ 0.02
R3HCC1-209ENST00000523720 DUOX1Q9NRD9 1551 aa15.19■□□□□ 0.02
R3HCC1-209ENST00000523720 TCERG1O14776 1098 aaKnown RBP15.19■□□□□ 0.02
R3HCC1-209ENST00000523720 TRIM28Q13263 835 aaKnown RBP15.19■□□□□ 0.02
R3HCC1-209ENST00000523720 GRAPQ13588 217 aa15.19■□□□□ 0.02
R3HCC1-209ENST00000523720 TWISTNBQ3B726 338 aaPredicted RBP15.19■□□□□ 0.02
R3HCC1-209ENST00000523720 TSPYL6Q8N831 410 aa15.19■□□□□ 0.02
R3HCC1-209ENST00000523720 GRAPLQ8TC17 118 aaPredicted RBP15.19■□□□□ 0.02
R3HCC1-209ENST00000523720 BBOX1O75936 387 aa15.18■□□□□ 0.02
R3HCC1-209ENST00000523720 LARGE2Q8N3Y3 721 aa15.18■□□□□ 0.02
R3HCC1-209ENST00000523720 SUPT20HQ8NEM7 779 aa15.18■□□□□ 0.02
R3HCC1-209ENST00000523720 FAM89AQ96GI7 184 aa15.18■□□□□ 0.02
R3HCC1-209ENST00000523720 MYD88Q99836 296 aa15.18■□□□□ 0.02
R3HCC1-209ENST00000523720 FZD9O00144 591 aa15.17■□□□□ 0.02
R3HCC1-209ENST00000523720 IRS4O14654 1257 aaPredicted RBP15.17■□□□□ 0.02
R3HCC1-209ENST00000523720 EIF6P56537 245 aaKnown RBP15.17■□□□□ 0.02
R3HCC1-209ENST00000523720 WDR63Q8IWG1 891 aa15.17■□□□□ 0.02
R3HCC1-209ENST00000523720 NIM1KQ8IY84 436 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms