RNA–Protein interactions for RNA: ENST00000523675.1

PTK2-248, Transcript of protein tyrosine kinase 2, humanhuman

TSL 3

Gene PTK2, Length 650 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-248ENST00000523675 NUDCQ9Y266 331 aa11.31□□□□□ -0.6
PTK2-248ENST00000523675 BRCA1P38398 1863 aaKnown RBP11.31□□□□□ -0.6
PTK2-248ENST00000523675 N4BP2Q86UW6 1770 aaPredicted RBP11.31□□□□□ -0.6
PTK2-248ENST00000523675 A0A087WZG4 1122 aa11.3□□□□□ -0.6
PTK2-248ENST00000523675 KCNA3P22001 575 aa11.3□□□□□ -0.6
PTK2-248ENST00000523675 SLC39A6Q13433 755 aa11.3□□□□□ -0.6
PTK2-248ENST00000523675 ZNF790Q6PG37 636 aa11.3□□□□□ -0.6
PTK2-248ENST00000523675 IL17REQ8NFR9 667 aa11.3□□□□□ -0.6
PTK2-248ENST00000523675 BCL2L12Q9HB09 334 aa11.3□□□□□ -0.6
PTK2-248ENST00000523675 SRP68Q9UHB9 627 aaKnown RBP11.3□□□□□ -0.6
PTK2-248ENST00000523675 BCS1LQ9Y276 419 aa11.3□□□□□ -0.6
PTK2-248ENST00000523675 ARFGEF1Q9Y6D6 1849 aa11.3□□□□□ -0.6
PTK2-248ENST00000523675 CEMIPQ8WUJ3 1361 aa11.29□□□□□ -0.6
PTK2-248ENST00000523675 POLRMTO00411 1230 aaKnown RBP11.29□□□□□ -0.6
PTK2-248ENST00000523675 FCHSD2O94868 740 aa11.29□□□□□ -0.6
PTK2-248ENST00000523675 EIF5P55010 431 aaKnown RBP11.29□□□□□ -0.6
PTK2-248ENST00000523675 MAP3K9P80192 1104 aa11.29□□□□□ -0.6
PTK2-248ENST00000523675 DDR1Q08345 913 aa11.29□□□□□ -0.6
PTK2-248ENST00000523675 DALRD3Q5D0E6 543 aaKnown RBP11.29□□□□□ -0.6
PTK2-248ENST00000523675 CEP350Q5VT06 3117 aa11.29□□□□□ -0.6
PTK2-248ENST00000523675 COL15A1P39059 1388 aa11.28□□□□□ -0.6
PTK2-248ENST00000523675 SIPA1L3O60292 1781 aaPredicted RBP11.28□□□□□ -0.6
PTK2-248ENST00000523675 HTATSF1O43719 755 aaKnown RBP11.28□□□□□ -0.6
PTK2-248ENST00000523675 USPL1Q5W0Q7 1092 aa11.28□□□□□ -0.6
PTK2-248ENST00000523675 ARHGAP27Q6ZUM4 889 aa11.28□□□□□ -0.6
PTK2-248ENST00000523675 RSPH6AQ9H0K4 717 aa11.28□□□□□ -0.6
PTK2-248ENST00000523675 ZBTB1Q9Y2K1 713 aa11.28□□□□□ -0.6
PTK2-248ENST00000523675 HEG1Q9ULI3 1381 aa11.28□□□□□ -0.6
PTK2-248ENST00000523675 NRXN2Q9P2S2 1712 aa11.27□□□□□ -0.61
PTK2-248ENST00000523675 PPP2R1AP30153 589 aa11.27□□□□□ -0.61
PTK2-248ENST00000523675 IL6STP40189 918 aaPredicted RBP11.27□□□□□ -0.61
PTK2-248ENST00000523675 NFIXQ14938 502 aa11.27□□□□□ -0.61
PTK2-248ENST00000523675 ZNF496Q96IT1 587 aaPredicted RBP11.27□□□□□ -0.61
PTK2-248ENST00000523675 FMNL2Q96PY5 1086 aa11.27□□□□□ -0.61
PTK2-248ENST00000523675 PDZRN3Q9UPQ7 1066 aa11.27□□□□□ -0.61
PTK2-248ENST00000523675 PRKAR2BP31323 418 aa11.26□□□□□ -0.61
PTK2-248ENST00000523675 PHACTR3Q96KR7 559 aa11.26□□□□□ -0.61
PTK2-248ENST00000523675 WWC3Q9ULE0 1092 aa11.26□□□□□ -0.61
PTK2-248ENST00000523675 VPS9D1Q9Y2B5 631 aa11.26□□□□□ -0.61
PTK2-248ENST00000523675 BTBD11A6QL63 1104 aa11.25□□□□□ -0.61
PTK2-248ENST00000523675 SERPINB2P05120 415 aa11.25□□□□□ -0.61
PTK2-248ENST00000523675 CANXP27824 592 aaKnown RBP11.25□□□□□ -0.61
PTK2-248ENST00000523675 RTF1Q92541 710 aaKnown RBP11.25□□□□□ -0.61
PTK2-248ENST00000523675 AFDNP55196 1824 aaKnown RBP11.24□□□□□ -0.61
PTK2-248ENST00000523675 TOMM70O94826 608 aa11.24□□□□□ -0.61
PTK2-248ENST00000523675 U2AF1L5P0DN76 240 aaPredicted RBP11.24□□□□□ -0.61
PTK2-248ENST00000523675 HSPA6P17066 643 aa11.24□□□□□ -0.61
PTK2-248ENST00000523675 PTPREP23469 700 aa11.24□□□□□ -0.61
PTK2-248ENST00000523675 U2AF1Q01081 240 aaKnown RBP eCLIP11.24□□□□□ -0.61
PTK2-248ENST00000523675 CAMK2BQ13554 666 aa11.24□□□□□ -0.61
PTK2-248ENST00000523675 NPM2Q86SE8 214 aaKnown RBP11.24□□□□□ -0.61
PTK2-248ENST00000523675 ZDHHC16Q969W1 377 aa11.24□□□□□ -0.61
PTK2-248ENST00000523675 SLC4A5Q9BY07 1137 aa11.24□□□□□ -0.61
PTK2-248ENST00000523675 RTN4Q9NQC3 1192 aaKnown RBP11.24□□□□□ -0.61
PTK2-248ENST00000523675 ZC3H4Q9UPT8 1303 aaKnown RBP11.24□□□□□ -0.61
PTK2-248ENST00000523675 H0YIN7 160 aa11.23□□□□□ -0.61
PTK2-248ENST00000523675 ZNF526Q8TF50 670 aaPredicted RBP11.23□□□□□ -0.61
PTK2-248ENST00000523675 ADAM33Q9BZ11 813 aa11.23□□□□□ -0.61
PTK2-248ENST00000523675 DLEC1Q9Y238 1755 aa11.23□□□□□ -0.61
PTK2-248ENST00000523675 NEFMP07197 916 aa11.22□□□□□ -0.61
PTK2-248ENST00000523675 SNRPA1P09661 255 aaKnown RBP11.22□□□□□ -0.61
PTK2-248ENST00000523675 CHRNA5P30532 468 aa11.22□□□□□ -0.61
PTK2-248ENST00000523675 PDE6BP35913 854 aa11.22□□□□□ -0.61
PTK2-248ENST00000523675 CNGB1Q14028 1251 aaPredicted RBP11.22□□□□□ -0.61
PTK2-248ENST00000523675 C9orf131Q5VYM1 1079 aa11.22□□□□□ -0.61
PTK2-248ENST00000523675 CLEC4GQ6UXB4 293 aa11.22□□□□□ -0.61
PTK2-248ENST00000523675 TTLL6Q8N841 843 aa11.22□□□□□ -0.61
PTK2-248ENST00000523675 KDM2BQ8NHM5 1336 aa11.22□□□□□ -0.61
PTK2-248ENST00000523675 BRIP1Q9BX63 1249 aa11.22□□□□□ -0.61
PTK2-248ENST00000523675 PNNQ9H307 717 aaKnown RBP11.22□□□□□ -0.61
PTK2-248ENST00000523675 HCSTQ9UBK5 93 aa11.22□□□□□ -0.61
PTK2-248ENST00000523675 CARMIL3Q8ND23 1372 aa11.21□□□□□ -0.61
PTK2-248ENST00000523675 SBF1O95248 1867 aa11.21□□□□□ -0.62
PTK2-248ENST00000523675 SCN7AQ01118 1682 aa11.2□□□□□ -0.62
PTK2-248ENST00000523675 A1BGP04217 495 aa11.2□□□□□ -0.62
PTK2-248ENST00000523675 TAF7Q15545 349 aaPredicted RBP11.2□□□□□ -0.62
PTK2-248ENST00000523675 TBC1D9BQ66K14 1250 aa11.2□□□□□ -0.62
PTK2-248ENST00000523675 C2CD5Q86YS7 1000 aa11.2□□□□□ -0.62
PTK2-248ENST00000523675 PNISRQ8TF01 805 aaKnown RBP11.2□□□□□ -0.62
PTK2-248ENST00000523675 SETDB2Q96T68 719 aa11.2□□□□□ -0.62
PTK2-248ENST00000523675 ZBED2Q9BTP6 218 aa11.2□□□□□ -0.62
PTK2-248ENST00000523675 TBC1D2BQ9UPU7 963 aa11.2□□□□□ -0.62
PTK2-248ENST00000523675 PCDHGA10Q9Y5H3 936 aa11.2□□□□□ -0.62
PTK2-248ENST00000523675 BHMG1C9JSJ3 638 aaPredicted RBP11.19□□□□□ -0.62
PTK2-248ENST00000523675 CAMTA2O94983 1202 aa11.19□□□□□ -0.62
PTK2-248ENST00000523675 LMNB1P20700 586 aa11.19□□□□□ -0.62
PTK2-248ENST00000523675 SPRYD3Q8NCJ5 442 aa11.19□□□□□ -0.62
PTK2-248ENST00000523675 RBM46Q8TBY0 533 aaKnown RBP11.19□□□□□ -0.62
PTK2-248ENST00000523675 RNF181Q9P0P0 153 aa11.19□□□□□ -0.62
PTK2-248ENST00000523675 ZNF652Q9Y2D9 606 aa11.19□□□□□ -0.62
PTK2-248ENST00000523675 USP16Q9Y5T5 823 aa11.19□□□□□ -0.62
PTK2-248ENST00000523675 KCNQ3O43525 872 aa11.18□□□□□ -0.62
PTK2-248ENST00000523675 APLP1P51693 650 aa11.18□□□□□ -0.62
PTK2-248ENST00000523675 FSTL1Q12841 308 aa11.18□□□□□ -0.62
PTK2-248ENST00000523675 PRR5LQ6MZQ0 368 aa11.18□□□□□ -0.62
PTK2-248ENST00000523675 MCM10Q7L590 875 aa11.18□□□□□ -0.62
PTK2-248ENST00000523675 DZIP3Q86Y13 1208 aaKnown RBP11.18□□□□□ -0.62
PTK2-248ENST00000523675 ST5P78524 1137 aa11.17□□□□□ -0.62
PTK2-248ENST00000523675 STYK1Q6J9G0 422 aa11.17□□□□□ -0.62
PTK2-248ENST00000523675 BICDL1Q6ZP65 573 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms