RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 MASTLQ96GX5 879 aa12.33□□□□□ -0.44
PABPC1-222ENST00000523555 RIC1Q4ADV7 1423 aa12.32□□□□□ -0.44
PABPC1-222ENST00000523555 ATP5J2-PTCD1G3V325 749 aa12.32□□□□□ -0.44
PABPC1-222ENST00000523555 GTF2E1P29083 439 aaPredicted RBP12.32□□□□□ -0.44
PABPC1-222ENST00000523555 TCIRG1Q13488 830 aa12.32□□□□□ -0.44
PABPC1-222ENST00000523555 C9orf131Q5VYM1 1079 aa12.32□□□□□ -0.44
PABPC1-222ENST00000523555 STYK1Q6J9G0 422 aa12.32□□□□□ -0.44
PABPC1-222ENST00000523555 PLBD2Q8NHP8 589 aa12.32□□□□□ -0.44
PABPC1-222ENST00000523555 NYXQ9GZU5 481 aa12.32□□□□□ -0.44
PABPC1-222ENST00000523555 HYPKQ9NX55 129 aa12.32□□□□□ -0.44
PABPC1-222ENST00000523555 ZNF521Q96K83 1311 aa12.32□□□□□ -0.44
PABPC1-222ENST00000523555 TWISTNBQ3B726 338 aaPredicted RBP12.31□□□□□ -0.44
PABPC1-222ENST00000523555 CRY2Q49AN0 593 aa12.31□□□□□ -0.44
PABPC1-222ENST00000523555 ANKRD13DQ6ZTN6 518 aa12.31□□□□□ -0.44
PABPC1-222ENST00000523555 G2E3Q7L622 706 aa12.31□□□□□ -0.44
PABPC1-222ENST00000523555 WDR63Q8IWG1 891 aa12.31□□□□□ -0.44
PABPC1-222ENST00000523555 C7orf43Q8WVR3 580 aa12.31□□□□□ -0.44
PABPC1-222ENST00000523555 PDZRN3Q9UPQ7 1066 aa12.31□□□□□ -0.44
PABPC1-222ENST00000523555 SNED1Q8TER0 1413 aa12.3□□□□□ -0.44
PABPC1-222ENST00000523555 NPR1P16066 1061 aa12.3□□□□□ -0.44
PABPC1-222ENST00000523555 EXOSC9Q06265 439 aaKnown RBP12.3□□□□□ -0.44
PABPC1-222ENST00000523555 PARP10Q53GL7 1025 aa12.3□□□□□ -0.44
PABPC1-222ENST00000523555 PPP1R42Q7Z4L9 355 aa12.3□□□□□ -0.44
PABPC1-222ENST00000523555 CNKSR1Q969H4 720 aa12.3□□□□□ -0.44
PABPC1-222ENST00000523555 ISCA1Q9BUE6 129 aa12.3□□□□□ -0.44
PABPC1-222ENST00000523555 UTP14AQ9BVJ6 771 aaKnown RBP12.3□□□□□ -0.44
PABPC1-222ENST00000523555 RNF181Q9P0P0 153 aa12.3□□□□□ -0.44
PABPC1-222ENST00000523555 HCLS1P14317 486 aaPredicted RBP12.29□□□□□ -0.44
PABPC1-222ENST00000523555 HSP90AB3PQ58FF7 597 aa12.29□□□□□ -0.44
PABPC1-222ENST00000523555 CCDC30Q5VVM6 783 aa12.29□□□□□ -0.44
PABPC1-222ENST00000523555 VAMP4O75379 141 aa12.28□□□□□ -0.44
PABPC1-222ENST00000523555 RTL5Q5HYW3 569 aaPredicted RBP12.28□□□□□ -0.44
PABPC1-222ENST00000523555 SLC10A5Q5PT55 438 aa12.28□□□□□ -0.44
PABPC1-222ENST00000523555 RIC3Q7Z5B4 369 aa12.28□□□□□ -0.44
PABPC1-222ENST00000523555 MYD88Q99836 296 aa12.28□□□□□ -0.44
PABPC1-222ENST00000523555 TRMT112Q9UI30 125 aaKnown RBP12.28□□□□□ -0.44
PABPC1-222ENST00000523555 MYH3P11055 1940 aa12.27□□□□□ -0.44
PABPC1-222ENST00000523555 CCER2I3L3R5 266 aa12.27□□□□□ -0.45
PABPC1-222ENST00000523555 GOLGA2Q08379 1002 aa12.27□□□□□ -0.45
PABPC1-222ENST00000523555 MIER1Q8N108 512 aa12.27□□□□□ -0.45
PABPC1-222ENST00000523555 JARID2Q92833 1246 aaPredicted RBP12.27□□□□□ -0.45
PABPC1-222ENST00000523555 FAM89AQ96GI7 184 aa12.27□□□□□ -0.45
PABPC1-222ENST00000523555 GPBP1L1Q9HC44 474 aaPredicted RBP12.27□□□□□ -0.45
PABPC1-222ENST00000523555 SPEF2Q9C093 1822 aa12.27□□□□□ -0.45
PABPC1-222ENST00000523555 COL4A5P29400 1685 aa12.26□□□□□ -0.45
PABPC1-222ENST00000523555 LRRC37AA6NMS7 1700 aa12.26□□□□□ -0.45
PABPC1-222ENST00000523555 KIF3CO14782 793 aa12.26□□□□□ -0.45
PABPC1-222ENST00000523555 SLC4A2P04920 1241 aa12.26□□□□□ -0.45
PABPC1-222ENST00000523555 LMNB1P20700 586 aa12.26□□□□□ -0.45
PABPC1-222ENST00000523555 HOXA10P31260 410 aaPredicted RBP12.26□□□□□ -0.45
PABPC1-222ENST00000523555 MAP3K2Q9Y2U5 619 aa12.26□□□□□ -0.45
PABPC1-222ENST00000523555 ABCC4O15439 1325 aa12.26□□□□□ -0.45
PABPC1-222ENST00000523555 SH3TC1Q8TE82 1336 aa12.26□□□□□ -0.45
PABPC1-222ENST00000523555 PI4KAP2A4QPH2 592 aa12.25□□□□□ -0.45
PABPC1-222ENST00000523555 IGKV5-2P06315 115 aa12.25□□□□□ -0.45
PABPC1-222ENST00000523555 CCDC93Q567U6 631 aa12.25□□□□□ -0.45
PABPC1-222ENST00000523555 DIEXFQ68CQ4 756 aaKnown RBP12.25□□□□□ -0.45
PABPC1-222ENST00000523555 PI4KAP1Q8N8J0 262 aa12.25□□□□□ -0.45
PABPC1-222ENST00000523555 RPGRQ92834 1020 aaKnown RBP12.25□□□□□ -0.45
PABPC1-222ENST00000523555 CDCA7LQ96GN5 454 aa12.25□□□□□ -0.45
PABPC1-222ENST00000523555 NLRP3Q96P20 1036 aa12.25□□□□□ -0.45
PABPC1-222ENST00000523555 METTL22Q9BUU2 404 aaPredicted RBP12.25□□□□□ -0.45
PABPC1-222ENST00000523555 TAOK3Q9H2K8 898 aa12.25□□□□□ -0.45
PABPC1-222ENST00000523555 NMRK2Q9NPI5 230 aa12.25□□□□□ -0.45
PABPC1-222ENST00000523555 RNF123Q5XPI4 1314 aa12.25□□□□□ -0.45
PABPC1-222ENST00000523555 ALDH1B1P30837 517 aa12.24□□□□□ -0.45
PABPC1-222ENST00000523555 TRIM28Q13263 835 aaKnown RBP12.24□□□□□ -0.45
PABPC1-222ENST00000523555 KSR2Q6VAB6 950 aa12.24□□□□□ -0.45
PABPC1-222ENST00000523555 RBM17Q96I25 401 aaKnown RBP12.24□□□□□ -0.45
PABPC1-222ENST00000523555 STK31Q9BXU1 1019 aa12.24□□□□□ -0.45
PABPC1-222ENST00000523555 LTBP3Q9NS15 1303 aa12.24□□□□□ -0.45
PABPC1-222ENST00000523555 DUOX1Q9NRD9 1551 aa12.23□□□□□ -0.45
PABPC1-222ENST00000523555 PPEF1O14829 653 aaPredicted RBP12.23□□□□□ -0.45
PABPC1-222ENST00000523555 C1QTNF8P60827 252 aa12.23□□□□□ -0.45
PABPC1-222ENST00000523555 FLIIQ13045 1269 aa12.23□□□□□ -0.45
PABPC1-222ENST00000523555 CWF19L2Q2TBE0 894 aaKnown RBP12.23□□□□□ -0.45
PABPC1-222ENST00000523555 CRAMP1Q96RY5 1269 aa12.23□□□□□ -0.45
PABPC1-222ENST00000523555 MYH16Q9H6N6 1097 aa12.23□□□□□ -0.45
PABPC1-222ENST00000523555 ZNF277Q9NRM2 450 aaPredicted RBP12.23□□□□□ -0.45
PABPC1-222ENST00000523555 LTBP1Q14766 1721 aa12.23□□□□□ -0.45
PABPC1-222ENST00000523555 WDR90Q96KV7 1748 aa12.23□□□□□ -0.45
PABPC1-222ENST00000523555 IRS4O14654 1257 aaPredicted RBP12.22□□□□□ -0.45
PABPC1-222ENST00000523555 DDX58O95786 925 aaKnown RBP12.22□□□□□ -0.45
PABPC1-222ENST00000523555 FKBP4Q02790 459 aaKnown RBP eCLIP12.22□□□□□ -0.45
PABPC1-222ENST00000523555 SOGA3Q5TF21 947 aa12.22□□□□□ -0.45
PABPC1-222ENST00000523555 ZBTB38Q8NAP3 1195 aaPredicted RBP12.22□□□□□ -0.45
PABPC1-222ENST00000523555 F6X3S4 739 aa12.21□□□□□ -0.45
PABPC1-222ENST00000523555 SLFN5Q08AF3 891 aa12.21□□□□□ -0.45
PABPC1-222ENST00000523555 CCDC191Q8NCU4 936 aa12.21□□□□□ -0.45
PABPC1-222ENST00000523555 CELF1Q92879 486 aaKnown RBP12.21□□□□□ -0.45
PABPC1-222ENST00000523555 CWC25Q9NXE8 425 aaPredicted RBP12.21□□□□□ -0.45
PABPC1-222ENST00000523555 NEURL1BA8MQ27 555 aa12.2□□□□□ -0.46
PABPC1-222ENST00000523555 POTECB2RU33 542 aa12.2□□□□□ -0.46
PABPC1-222ENST00000523555 PCCAP05165 728 aaPredicted RBP12.2□□□□□ -0.46
PABPC1-222ENST00000523555 FKBP5Q13451 457 aaPredicted RBP12.2□□□□□ -0.46
PABPC1-222ENST00000523555 SF3B3Q15393 1217 aaKnown RBP12.2□□□□□ -0.46
PABPC1-222ENST00000523555 CCDC85AQ96PX6 553 aaPredicted RBP12.2□□□□□ -0.46
PABPC1-222ENST00000523555 RRAGCQ9HB90 399 aa12.2□□□□□ -0.46
PABPC1-222ENST00000523555 ZNF541Q9H0D2 1346 aa12.19□□□□□ -0.46
PABPC1-222ENST00000523555 ZC3H4Q9UPT8 1303 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms