RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 CSPP1Q1MSJ5 1256 aa21.4■■□□□ 1.02
IKBKB-228ENST00000523517 LARP1Q6PKG0 1096 aaKnown RBP21.4■■□□□ 1.02
IKBKB-228ENST00000523517 TLR7Q9NYK1 1049 aaKnown RBP21.4■■□□□ 1.02
IKBKB-228ENST00000523517 SETD1BQ9UPS6 1966 aaKnown RBP21.39■■□□□ 1.02
IKBKB-228ENST00000523517 DDX54Q8TDD1 881 aaKnown RBP21.39■■□□□ 1.02
IKBKB-228ENST00000523517 LMTK3Q96Q04 1460 aa21.39■■□□□ 1.02
IKBKB-228ENST00000523517 SLC27A2O14975 620 aa21.38■■□□□ 1.01
IKBKB-228ENST00000523517 ZNF790Q6PG37 636 aa21.38■■□□□ 1.01
IKBKB-228ENST00000523517 UBE2Q2Q8WVN8 375 aa21.38■■□□□ 1.01
IKBKB-228ENST00000523517 SIL1Q9H173 461 aa21.38■■□□□ 1.01
IKBKB-228ENST00000523517 PTMAP06454 111 aaKnown RBP21.38■■□□□ 1.01
IKBKB-228ENST00000523517 DNM1Q05193 864 aaKnown RBP21.38■■□□□ 1.01
IKBKB-228ENST00000523517 TPRNQ4KMQ1 711 aa21.38■■□□□ 1.01
IKBKB-228ENST00000523517 KRT28Q7Z3Y7 464 aa21.38■■□□□ 1.01
IKBKB-228ENST00000523517 NECAB1Q8N987 351 aa21.38■■□□□ 1.01
IKBKB-228ENST00000523517 BOLA2Q9H3K6 86 aa21.38■■□□□ 1.01
IKBKB-228ENST00000523517 TPCN1Q9ULQ1 816 aa21.38■■□□□ 1.01
IKBKB-228ENST00000523517 DTNBO60941 627 aa21.37■■□□□ 1.01
IKBKB-228ENST00000523517 PSMA5P28066 241 aa21.37■■□□□ 1.01
IKBKB-228ENST00000523517 R3HCC1Q9Y3T6 440 aaKnown RBP21.37■■□□□ 1.01
IKBKB-228ENST00000523517 A0A0D9SFI3 127 aa21.37■■□□□ 1.01
IKBKB-228ENST00000523517 NEURL1BA8MQ27 555 aa21.37■■□□□ 1.01
IKBKB-228ENST00000523517 NEXNQ0ZGT2 675 aa21.37■■□□□ 1.01
IKBKB-228ENST00000523517 SLC39A6Q13433 755 aa21.37■■□□□ 1.01
IKBKB-228ENST00000523517 FSD1Q9BTV5 496 aa21.37■■□□□ 1.01
IKBKB-228ENST00000523517 GCKRQ14397 625 aa21.36■■□□□ 1.01
IKBKB-228ENST00000523517 ERBB3P21860 1342 aa21.36■■□□□ 1.01
IKBKB-228ENST00000523517 CAMTA1Q9Y6Y1 1673 aa21.36■■□□□ 1.01
IKBKB-228ENST00000523517 MYL6BP14649 208 aa21.36■■□□□ 1.01
IKBKB-228ENST00000523517 KLHL34Q8N239 644 aa21.36■■□□□ 1.01
IKBKB-228ENST00000523517 KLHDC4Q8TBB5 520 aa21.36■■□□□ 1.01
IKBKB-228ENST00000523517 SLC52A2Q9HAB3 445 aa21.36■■□□□ 1.01
IKBKB-228ENST00000523517 VPS37CA5D8V6 355 aaPredicted RBP21.35■■□□□ 1.01
IKBKB-228ENST00000523517 RNF20Q5VTR2 975 aa21.35■■□□□ 1.01
IKBKB-228ENST00000523517 XAGE3Q8WTP9 111 aa21.35■■□□□ 1.01
IKBKB-228ENST00000523517 RAPGEF4Q8WZA2 1011 aa21.34■■□□□ 1.01
IKBKB-228ENST00000523517 HCLS1P14317 486 aaPredicted RBP21.34■■□□□ 1.01
IKBKB-228ENST00000523517 EPHA10Q5JZY3 1008 aa21.34■■□□□ 1.01
IKBKB-228ENST00000523517 METTL22Q9BUU2 404 aaPredicted RBP21.34■■□□□ 1.01
IKBKB-228ENST00000523517 MED23Q9ULK4 1368 aa21.34■■□□□ 1.01
IKBKB-228ENST00000523517 ADAMTS7Q9UKP4 1686 aa21.34■■□□□ 1.01
IKBKB-228ENST00000523517 PDIA4P13667 645 aaKnown RBP21.33■■□□□ 1.01
IKBKB-228ENST00000523517 COPS6Q7L5N1 327 aa21.33■■□□□ 1.01
IKBKB-228ENST00000523517 MYD88Q99836 296 aa21.33■■□□□ 1.01
IKBKB-228ENST00000523517 USP25Q9UHP3 1055 aa21.33■■□□□ 1.01
IKBKB-228ENST00000523517 NPHP4O75161 1426 aaPredicted RBP21.33■■□□□ 1.01
IKBKB-228ENST00000523517 NPHP3Q7Z494 1330 aa21.33■■□□□ 1.01
IKBKB-228ENST00000523517 COL9A3Q14050 684 aaPredicted RBP21.33■■□□□ 1
IKBKB-228ENST00000523517 ANKRD1Q15327 319 aa21.33■■□□□ 1
IKBKB-228ENST00000523517 BLOC1S2Q6QNY1 142 aa21.33■■□□□ 1
IKBKB-228ENST00000523517 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.33■■□□□ 1
IKBKB-228ENST00000523517 SIPA1L3O60292 1781 aaPredicted RBP21.32■■□□□ 1
IKBKB-228ENST00000523517 ZC3H6P61129 1189 aaKnown RBP21.32■■□□□ 1
IKBKB-228ENST00000523517 LARP1BQ659C4 914 aaKnown RBP21.32■■□□□ 1
IKBKB-228ENST00000523517 FUCA2Q9BTY2 467 aa21.32■■□□□ 1
IKBKB-228ENST00000523517 ALDH8A1Q9H2A2 487 aaPredicted RBP21.32■■□□□ 1
IKBKB-228ENST00000523517 RPS6KB1P23443 525 aa21.32■■□□□ 1
IKBKB-228ENST00000523517 NFATC2IPQ8NCF5 419 aa21.32■■□□□ 1
IKBKB-228ENST00000523517 KDM6AO15550 1401 aaPredicted RBP21.32■■□□□ 1
IKBKB-228ENST00000523517 PHKG2P15735 406 aa21.31■■□□□ 1
IKBKB-228ENST00000523517 GIMAP6Q6P9H5 292 aa21.31■■□□□ 1
IKBKB-228ENST00000523517 MRC1P22897 1456 aa21.31■■□□□ 1
IKBKB-228ENST00000523517 COPRSQ9NQ92 184 aa21.31■■□□□ 1
IKBKB-228ENST00000523517 NLRP2Q9NX02 1062 aa21.31■■□□□ 1
IKBKB-228ENST00000523517 TAF6LQ9Y6J9 622 aa21.31■■□□□ 1
IKBKB-228ENST00000523517 ZNF142P52746 1687 aaPredicted RBP21.3■■□□□ 1
IKBKB-228ENST00000523517 ADCY5O95622 1261 aa21.3■■□□□ 1
IKBKB-228ENST00000523517 KIAA2012Q0VF49 1180 aa21.3■■□□□ 1
IKBKB-228ENST00000523517 ZNF589Q86UQ0 364 aaPredicted RBP21.3■■□□□ 1
IKBKB-228ENST00000523517 ZNF496Q96IT1 587 aaPredicted RBP21.3■■□□□ 1
IKBKB-228ENST00000523517 HMG20BQ9P0W2 317 aa21.3■■□□□ 1
IKBKB-228ENST00000523517 JCADQ9P266 1359 aa21.3■■□□□ 1
IKBKB-228ENST00000523517 TATP17735 454 aaPredicted RBP21.3■■□□□ 1
IKBKB-228ENST00000523517 PDCP20941 246 aa21.3■■□□□ 1
IKBKB-228ENST00000523517 TSGA10IPQ3SY00 556 aa21.3■■□□□ 1
IKBKB-228ENST00000523517 ANKRD13DQ6ZTN6 518 aa21.3■■□□□ 1
IKBKB-228ENST00000523517 TAF5LO75529 589 aa21.29■■□□□ 1
IKBKB-228ENST00000523517 TCEANC2Q96MN5 208 aa21.29■■□□□ 1
IKBKB-228ENST00000523517 KDM4AO75164 1064 aa21.29■■□□□ 1
IKBKB-228ENST00000523517 ATP5JP18859 108 aa21.29■■□□□ 1
IKBKB-228ENST00000523517 RFX5P48382 616 aaPredicted RBP21.29■■□□□ 1
IKBKB-228ENST00000523517 TOB2Q14106 344 aaPredicted RBP21.29■■□□□ 1
IKBKB-228ENST00000523517 CDC37L1Q7L3B6 337 aa21.29■■□□□ 1
IKBKB-228ENST00000523517 LRP10Q7Z4F1 713 aa21.29■■□□□ 1
IKBKB-228ENST00000523517 EDC3Q96F86 508 aaKnown RBP21.29■■□□□ 1
IKBKB-228ENST00000523517 KRT85P78386 507 aa21.28■■□□□ 1
IKBKB-228ENST00000523517 DBNLQ9UJU6 430 aaKnown RBP21.28■■□□□ 1
IKBKB-228ENST00000523517 TRPM3Q9HCF6 1732 aaPredicted RBP21.28■■□□□ 1
IKBKB-228ENST00000523517 MST1RQ04912 1400 aa21.28■■□□□ 1
IKBKB-228ENST00000523517 TNNI3KQ59H18 835 aa21.28■■□□□ 1
IKBKB-228ENST00000523517 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.28■■□□□ 11e-6■■■□□ 18.1
IKBKB-228ENST00000523517 FPGT-TNNI3KV9GXZ4 949 aa21.28■■□□□ 1
IKBKB-228ENST00000523517 SNRPA1P09661 255 aaKnown RBP21.27■■□□□ 1
IKBKB-228ENST00000523517 PTPN12Q05209 780 aaKnown RBP21.27■■□□□ 1
IKBKB-228ENST00000523517 USPL1Q5W0Q7 1092 aa21.27■■□□□ 1
IKBKB-228ENST00000523517 TTC6Q86TZ1 520 aa21.27■■□□□ 1
IKBKB-228ENST00000523517 JARID2Q92833 1246 aaPredicted RBP21.27■■□□□ 1
IKBKB-228ENST00000523517 USP16Q9Y5T5 823 aa21.27■■□□□ 1
IKBKB-228ENST00000523517 C1orf167Q5SNV9 1468 aa21.27■■□□□ 1
IKBKB-228ENST00000523517 FERMT3Q86UX7 667 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms