RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 TRIM26Q12899 539 aaPredicted RBP15.61■□□□□ 0.09
SDCBP-211ENST00000523441 CLEC4GQ6UXB4 293 aa15.61■□□□□ 0.09
SDCBP-211ENST00000523441 RPGRQ92834 1020 aaKnown RBP15.61■□□□□ 0.09
SDCBP-211ENST00000523441 ABCC12Q96J65 1359 aa15.61■□□□□ 0.09
SDCBP-211ENST00000523441 NUP98P52948 1817 aa15.6■□□□□ 0.09
SDCBP-211ENST00000523441 NBPF26B4DH59 902 aa15.6■□□□□ 0.09
SDCBP-211ENST00000523441 SNRPA1P09661 255 aaKnown RBP15.6■□□□□ 0.09
SDCBP-211ENST00000523441 SCNN1DP51172 638 aa15.6■□□□□ 0.09
SDCBP-211ENST00000523441 DCTN1Q14203 1278 aa15.6■□□□□ 0.09
SDCBP-211ENST00000523441 CST9Q5W186 159 aa15.6■□□□□ 0.09
SDCBP-211ENST00000523441 NBPF10Q6P3W6 841 aaKnown RBP15.6■□□□□ 0.09
SDCBP-211ENST00000523441 NBPF15Q8N660 670 aa15.6■□□□□ 0.09
SDCBP-211ENST00000523441 MCOLN1Q9GZU1 580 aa15.6■□□□□ 0.09
SDCBP-211ENST00000523441 COL3A1P02461 1466 aaPredicted RBP15.59■□□□□ 0.09
SDCBP-211ENST00000523441 KLRG2A4D1S0 409 aaPredicted RBP15.59■□□□□ 0.09
SDCBP-211ENST00000523441 GPTP24298 496 aa15.59■□□□□ 0.09
SDCBP-211ENST00000523441 CELF2O95319 508 aaKnown RBP15.58■□□□□ 0.08
SDCBP-211ENST00000523441 DGKZQ13574 1117 aa15.58■□□□□ 0.08
SDCBP-211ENST00000523441 NIM1KQ8IY84 436 aa15.58■□□□□ 0.08
SDCBP-211ENST00000523441 RTF1Q92541 710 aaKnown RBP15.58■□□□□ 0.08
SDCBP-211ENST00000523441 MIS18AQ9NYP9 233 aa15.58■□□□□ 0.08
SDCBP-211ENST00000523441 TLL2Q9Y6L7 1015 aa15.58■□□□□ 0.08
SDCBP-211ENST00000523441 KIF7Q2M1P5 1343 aa15.58■□□□□ 0.08
SDCBP-211ENST00000523441 PPIP5K2O43314 1243 aa15.57■□□□□ 0.08
SDCBP-211ENST00000523441 PSMD1Q99460 953 aa15.57■□□□□ 0.08
SDCBP-211ENST00000523441 GLIS2Q9BZE0 524 aaPredicted RBP15.57■□□□□ 0.08
SDCBP-211ENST00000523441 RRP7AQ9Y3A4 280 aaKnown RBP15.57■□□□□ 0.08
SDCBP-211ENST00000523441 CEMIPQ8WUJ3 1361 aa15.57■□□□□ 0.08
SDCBP-211ENST00000523441 PPEF1O14829 653 aaPredicted RBP15.56■□□□□ 0.08
SDCBP-211ENST00000523441 AOC3Q16853 763 aa15.56■□□□□ 0.08
SDCBP-211ENST00000523441 USP50Q70EL3 339 aaPredicted RBP15.56■□□□□ 0.08
SDCBP-211ENST00000523441 LAMB4A4D0S4 1761 aa15.55■□□□□ 0.08
SDCBP-211ENST00000523441 MYL6BP14649 208 aa15.55■□□□□ 0.08
SDCBP-211ENST00000523441 CIAPIN1Q6FI81 312 aa15.55■□□□□ 0.08
SDCBP-211ENST00000523441 NYXQ9GZU5 481 aa15.55■□□□□ 0.08
SDCBP-211ENST00000523441 ZBTB3Q9H5J0 574 aa15.55■□□□□ 0.08
SDCBP-211ENST00000523441 TNRC18O15417 2968 aaPredicted RBP15.55■□□□□ 0.08
SDCBP-211ENST00000523441 RGS19P49795 217 aa15.54■□□□□ 0.08
SDCBP-211ENST00000523441 SNED1Q8TER0 1413 aa15.53■□□□□ 0.08
SDCBP-211ENST00000523441 MAP2K2P36507 400 aa15.53■□□□□ 0.08
SDCBP-211ENST00000523441 GMPSP49915 693 aaPredicted RBP15.53■□□□□ 0.08
SDCBP-211ENST00000523441 DLK2Q6UY11 383 aa15.53■□□□□ 0.08
SDCBP-211ENST00000523441 KIF6Q6ZMV9 814 aa15.53■□□□□ 0.08
SDCBP-211ENST00000523441 TTLL7Q6ZT98 887 aa15.53■□□□□ 0.08
SDCBP-211ENST00000523441 SAPCD2Q86UD0 394 aa15.53■□□□□ 0.08
SDCBP-211ENST00000523441 RBM17Q96I25 401 aaKnown RBP15.53■□□□□ 0.08
SDCBP-211ENST00000523441 BCL2L13Q9BXK5 485 aa15.53■□□□□ 0.08
SDCBP-211ENST00000523441 RSPH6AQ9H0K4 717 aa15.53■□□□□ 0.08
SDCBP-211ENST00000523441 TMX4Q9H1E5 349 aaPredicted RBP15.53■□□□□ 0.08
SDCBP-211ENST00000523441 ADARB2Q9NS39 739 aaKnown RBP15.53■□□□□ 0.08
SDCBP-211ENST00000523441 PER1O15534 1290 aaPredicted RBP15.52■□□□□ 0.08
SDCBP-211ENST00000523441 U2AF1L5P0DN76 240 aaPredicted RBP15.52■□□□□ 0.08
SDCBP-211ENST00000523441 SOX10P56693 466 aa15.52■□□□□ 0.08
SDCBP-211ENST00000523441 U2AF1Q01081 240 aaKnown RBP eCLIP15.52■□□□□ 0.08
SDCBP-211ENST00000523441 CC2D2BQ6DHV5 1058 aa15.52■□□□□ 0.08
SDCBP-211ENST00000523441 C3orf67Q6ZVT6 689 aa15.52■□□□□ 0.08
SDCBP-211ENST00000523441 ZIC5Q96T25 663 aa15.52■□□□□ 0.08
SDCBP-211ENST00000523441 GPRC5DQ9NZD1 345 aa15.52■□□□□ 0.08
SDCBP-211ENST00000523441 RAD17O75943 681 aa15.51■□□□□ 0.07
SDCBP-211ENST00000523441 CXCL9Q07325 125 aa15.51■□□□□ 0.07
SDCBP-211ENST00000523441 CRY2Q49AN0 593 aa15.51■□□□□ 0.07
SDCBP-211ENST00000523441 SUSD4Q5VX71 490 aa15.51■□□□□ 0.07
SDCBP-211ENST00000523441 ZNF428Q96B54 188 aa15.51■□□□□ 0.07
SDCBP-211ENST00000523441 CFAP53Q96M91 514 aa15.51■□□□□ 0.07
SDCBP-211ENST00000523441 NPC1L1Q9UHC9 1359 aa15.5■□□□□ 0.07
SDCBP-211ENST00000523441 UBN2Q6ZU65 1347 aa15.5■□□□□ 0.07
SDCBP-211ENST00000523441 SHTN1A0MZ66 631 aa15.5■□□□□ 0.07
SDCBP-211ENST00000523441 TAF1P21675 1872 aa15.5■□□□□ 0.07
SDCBP-211ENST00000523441 MAP3K15Q6ZN16 1313 aa15.49■□□□□ 0.07
SDCBP-211ENST00000523441 USP48Q86UV5 1035 aa15.49■□□□□ 0.07
SDCBP-211ENST00000523441 DLG5Q8TDM6 1919 aa15.49■□□□□ 0.07
SDCBP-211ENST00000523441 CA12O43570 354 aa15.48■□□□□ 0.07
SDCBP-211ENST00000523441 HOXA10P31260 410 aaPredicted RBP15.48■□□□□ 0.07
SDCBP-211ENST00000523441 BRPF1P55201 1214 aaPredicted RBP15.48■□□□□ 0.07
SDCBP-211ENST00000523441 HUNKP57058 714 aa15.48■□□□□ 0.07
SDCBP-211ENST00000523441 TAF7Q15545 349 aaPredicted RBP15.48■□□□□ 0.07
SDCBP-211ENST00000523441 TRPM4Q8TD43 1214 aa15.48■□□□□ 0.07
SDCBP-211ENST00000523441 PCDH10Q9P2E7 1040 aa15.48■□□□□ 0.07
SDCBP-211ENST00000523441 ZNRF3Q9ULT6 936 aa15.48■□□□□ 0.07
SDCBP-211ENST00000523441 NUDCQ9Y266 331 aa15.48■□□□□ 0.07
SDCBP-211ENST00000523441 POLR2AP24928 1970 aaKnown RBP15.47■□□□□ 0.07
SDCBP-211ENST00000523441 LAMB2P55268 1798 aa15.47■□□□□ 0.07
SDCBP-211ENST00000523441 HIRAP54198 1017 aaPredicted RBP15.47■□□□□ 0.07
SDCBP-211ENST00000523441 CCER1Q8TC90 406 aaPredicted RBP15.47■□□□□ 0.07
SDCBP-211ENST00000523441 CRAMP1Q96RY5 1269 aa15.47■□□□□ 0.07
SDCBP-211ENST00000523441 PDE4DIPQ5VU43 2346 aa15.46■□□□□ 0.07
SDCBP-211ENST00000523441 RBM26Q5T8P6 1007 aaKnown RBP15.46■□□□□ 0.07
SDCBP-211ENST00000523441 DPP8Q6V1X1 898 aaPredicted RBP15.46■□□□□ 0.07
SDCBP-211ENST00000523441 NLRP3Q96P20 1036 aa15.46■□□□□ 0.07
SDCBP-211ENST00000523441 THUMPD2Q9BTF0 503 aaKnown RBP15.46■□□□□ 0.07
SDCBP-211ENST00000523441 KDM3BQ7LBC6 1761 aa15.46■□□□□ 0.07
SDCBP-211ENST00000523441 ABCC4O15439 1325 aa15.45■□□□□ 0.06
SDCBP-211ENST00000523441 CLSPNQ9HAW4 1339 aa15.45■□□□□ 0.06
SDCBP-211ENST00000523441 RIC1Q4ADV7 1423 aa15.45■□□□□ 0.06
SDCBP-211ENST00000523441 ERVV-1B6SEH8 477 aa15.45■□□□□ 0.06
SDCBP-211ENST00000523441 NTSR2O95665 410 aa15.45■□□□□ 0.06
SDCBP-211ENST00000523441 GRIPAP1Q4V328 841 aa15.45■□□□□ 0.06
SDCBP-211ENST00000523441 CNOT7Q9UIV1 285 aaKnown RBP15.45■□□□□ 0.06
SDCBP-211ENST00000523441 ZBTB12Q9Y330 459 aaPredicted RBP15.45■□□□□ 0.06
SDCBP-211ENST00000523441 ATP6V0A2Q9Y487 856 aa15.45■□□□□ 0.06
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