RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 MAP3K2Q9Y2U5 619 aa15.15■□□□□ 0.02
PVT1-215ENST00000522963 TPTE2Q6XPS3 522 aa15.14■□□□□ 0.01
PVT1-215ENST00000522963 DNAAF4Q8WXU2 420 aa15.14■□□□□ 0.01
PVT1-215ENST00000522963 CLUAP1Q96AJ1 413 aa15.14■□□□□ 0.01
PVT1-215ENST00000522963 KIAA1551Q9HCM1 1747 aa15.14■□□□□ 0.01
PVT1-215ENST00000522963 RGL2O15211 777 aa15.13■□□□□ 0.01
PVT1-215ENST00000522963 C20orf194Q5TEA3 1177 aa15.13■□□□□ 0.01
PVT1-215ENST00000522963 NUTM1Q86Y26 1132 aa15.13■□□□□ 0.01
PVT1-215ENST00000522963 ANKRD31Q8N7Z5 1873 aa15.13■□□□□ 0.01
PVT1-215ENST00000522963 ZNF622Q969S3 477 aaKnown RBP eCLIP15.13■□□□□ 0.01
PVT1-215ENST00000522963 PIM2Q9P1W9 311 aa15.13■□□□□ 0.01
PVT1-215ENST00000522963 ABCC4O15439 1325 aa15.13■□□□□ 0.01
PVT1-215ENST00000522963 H0YIN7 160 aa15.12■□□□□ 0.01
PVT1-215ENST00000522963 RLBP1P12271 317 aa15.12■□□□□ 0.01
PVT1-215ENST00000522963 PDE6BP35913 854 aa15.12■□□□□ 0.01
PVT1-215ENST00000522963 SUSD4Q5VX71 490 aa15.12■□□□□ 0.01
PVT1-215ENST00000522963 SLC4A10Q6U841 1118 aa15.12■□□□□ 0.01
PVT1-215ENST00000522963 DZIP1LQ8IYY4 767 aaKnown RBP15.12■□□□□ 0.01
PVT1-215ENST00000522963 ZNF34Q8IZ26 560 aa15.12■□□□□ 0.01
PVT1-215ENST00000522963 PANK1Q8TE04 598 aa15.12■□□□□ 0.01
PVT1-215ENST00000522963 METTL22Q9BUU2 404 aaPredicted RBP15.12■□□□□ 0.01
PVT1-215ENST00000522963 BRIP1Q9BX63 1249 aa15.12■□□□□ 0.01
PVT1-215ENST00000522963 UBN2Q6ZU65 1347 aa15.12■□□□□ 0.01
PVT1-215ENST00000522963 ATP10DQ9P241 1426 aa15.11■□□□□ 0.01
PVT1-215ENST00000522963 GRIN3BO60391 1043 aa15.11■□□□□ 0.01
PVT1-215ENST00000522963 KCNA3P22001 575 aa15.11■□□□□ 0.01
PVT1-215ENST00000522963 HSP90AB3PQ58FF7 597 aa15.11■□□□□ 0.01
PVT1-215ENST00000522963 PPP1R42Q7Z4L9 355 aa15.11■□□□□ 0.01
PVT1-215ENST00000522963 MYD88Q99836 296 aa15.11■□□□□ 0.01
PVT1-215ENST00000522963 NYXQ9GZU5 481 aa15.11■□□□□ 0.01
PVT1-215ENST00000522963 ATP5J2-PTCD1G3V325 749 aa15.1■□□□□ 0.01
PVT1-215ENST00000522963 TCIRG1Q13488 830 aa15.1■□□□□ 0.01
PVT1-215ENST00000522963 PDE3AQ14432 1141 aa15.1■□□□□ 0.01
PVT1-215ENST00000522963 ERFEQ4G0M1 354 aa15.1■□□□□ 0.01
PVT1-215ENST00000522963 PARP10Q53GL7 1025 aa15.1■□□□□ 0.01
PVT1-215ENST00000522963 DALRD3Q5D0E6 543 aaKnown RBP15.1■□□□□ 0.01
PVT1-215ENST00000522963 BEND3Q5T5X7 828 aa15.1■□□□□ 0.01
PVT1-215ENST00000522963 FTSJ3Q8IY81 847 aaKnown RBP15.1■□□□□ 0.01
PVT1-215ENST00000522963 TMEM57Q8N5G2 664 aa15.1■□□□□ 0.01
PVT1-215ENST00000522963 ZNF219Q9P2Y4 722 aaPredicted RBP15.1■□□□□ 0.01
PVT1-215ENST00000522963 ANKRD36CQ5JPF3 1778 aa15.1■□□□□ 0.01
PVT1-215ENST00000522963 CHD4Q14839 1912 aa15.09■□□□□ 0.01
PVT1-215ENST00000522963 CACNA1FO60840 1977 aa15.09■□□□□ 0.01
PVT1-215ENST00000522963 IGKV5-2P06315 115 aa15.09■□□□□ 0.01
PVT1-215ENST00000522963 MS4A1P11836 297 aa15.09■□□□□ 0.01
PVT1-215ENST00000522963 ISCA1Q9BUE6 129 aa15.09■□□□□ 0.01
PVT1-215ENST00000522963 UTP14AQ9BVJ6 771 aaKnown RBP15.09■□□□□ 0.01
PVT1-215ENST00000522963 BRCA1P38398 1863 aaKnown RBP15.09■□□□□ 0.01
PVT1-215ENST00000522963 ARFGEF2Q9Y6D5 1785 aa15.08■□□□□ 0.01
PVT1-215ENST00000522963 CACNA1SQ13698 1873 aa15.08■□□□□ 0.01
PVT1-215ENST00000522963 YY1P25490 414 aa15.08■□□□□ 0
PVT1-215ENST00000522963 CCT4P50991 539 aaKnown RBP15.08■□□□□ 0
PVT1-215ENST00000522963 NEXNQ0ZGT2 675 aa15.08■□□□□ 0
PVT1-215ENST00000522963 CWF19L2Q2TBE0 894 aaKnown RBP15.08■□□□□ 0
PVT1-215ENST00000522963 INTS3Q68E01 1043 aaKnown RBP15.08■□□□□ 0
PVT1-215ENST00000522963 ARHGAP27Q6ZUM4 889 aa15.08■□□□□ 0
PVT1-215ENST00000522963 NLRP10Q86W26 655 aa15.08■□□□□ 0
PVT1-215ENST00000522963 LINS1Q8NG48 757 aa15.08■□□□□ 0
PVT1-215ENST00000522963 TRMT112Q9UI30 125 aaKnown RBP15.08■□□□□ 0
PVT1-215ENST00000522963 ABCC12Q96J65 1359 aa15.08■□□□□ 0
PVT1-215ENST00000522963 COL11A2P13942 1736 aaPredicted RBP15.07■□□□□ 0
PVT1-215ENST00000522963 NTSR2O95665 410 aa15.07■□□□□ 0
PVT1-215ENST00000522963 IRX6P78412 446 aaPredicted RBP15.07■□□□□ 0
PVT1-215ENST00000522963 RTL5Q5HYW3 569 aaPredicted RBP15.07■□□□□ 0
PVT1-215ENST00000522963 TTLL6Q8N841 843 aa15.07■□□□□ 0
PVT1-215ENST00000522963 SRCIN1Q9C0H9 1055 aa15.07■□□□□ 0
PVT1-215ENST00000522963 COG6Q9Y2V7 657 aa15.07■□□□□ 0
PVT1-215ENST00000522963 NEURL1BA8MQ27 555 aa15.06■□□□□ 0
PVT1-215ENST00000522963 ALDH1L1O75891 902 aa15.06■□□□□ 0
PVT1-215ENST00000522963 TRIM28Q13263 835 aaKnown RBP15.06■□□□□ 0
PVT1-215ENST00000522963 ITPRIPQ8IWB1 547 aa15.06■□□□□ 0
PVT1-215ENST00000522963 PDZRN3Q9UPQ7 1066 aa15.06■□□□□ 0
PVT1-215ENST00000522963 DLEC1Q9Y238 1755 aa15.06■□□□□ 0
PVT1-215ENST00000522963 SRGNP10124 158 aa15.05■□□□□ -0
PVT1-215ENST00000522963 HCLS1P14317 486 aaPredicted RBP15.05■□□□□ -0
PVT1-215ENST00000522963 MVPQ14764 893 aaKnown RBP15.05■□□□□ -0
PVT1-215ENST00000522963 SYNE4Q8N205 404 aa15.05■□□□□ -0
PVT1-215ENST00000522963 MASTLQ96GX5 879 aa15.05■□□□□ -0
PVT1-215ENST00000522963 CRBNQ96SW2 442 aa15.05■□□□□ -0
PVT1-215ENST00000522963 ARFGEF1Q9Y6D6 1849 aa15.05■□□□□ -0
PVT1-215ENST00000522963 TNRC6CQ9HCJ0 1690 aaKnown RBP15.04■□□□□ -0
PVT1-215ENST00000522963 IBTKQ9P2D0 1353 aaPredicted RBP15.04■□□□□ -0
PVT1-215ENST00000522963 NPR1P16066 1061 aa15.04■□□□□ -0
PVT1-215ENST00000522963 GCKRQ14397 625 aa15.04■□□□□ -0
PVT1-215ENST00000522963 STYK1Q6J9G0 422 aa15.04■□□□□ -0
PVT1-215ENST00000522963 CCDC191Q8NCU4 936 aa15.04■□□□□ -0
PVT1-215ENST00000522963 RPGRQ92834 1020 aaKnown RBP15.04■□□□□ -0
PVT1-215ENST00000522963 CNKSR1Q969H4 720 aa15.04■□□□□ -0
PVT1-215ENST00000522963 CWC25Q9NXE8 425 aaPredicted RBP15.04■□□□□ -0
PVT1-215ENST00000522963 SH3TC1Q8TE82 1336 aa15.03■□□□□ -0
PVT1-215ENST00000522963 C21orf2O43822 256 aa15.03■□□□□ -0
PVT1-215ENST00000522963 JARID2Q92833 1246 aaPredicted RBP15.03■□□□□ -0
PVT1-215ENST00000522963 FAM89AQ96GI7 184 aa15.03■□□□□ -0
PVT1-215ENST00000522963 NLRP3Q96P20 1036 aa15.03■□□□□ -0
PVT1-215ENST00000522963 SLX4Q8IY92 1834 aa15.03■□□□□ -0
PVT1-215ENST00000522963 PRPF40BQ6NWY9 871 aaKnown RBP15.02■□□□□ -0
PVT1-215ENST00000522963 C3orf67Q6ZVT6 689 aa15.02■□□□□ -0
PVT1-215ENST00000522963 MEIS3Q99687 375 aa15.02■□□□□ -0
PVT1-215ENST00000522963 USP44Q9H0E7 712 aa15.02■□□□□ -0
PVT1-215ENST00000522963 GRM8O00222 908 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms