RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 SURF6O75683 361 aaKnown RBP18.73■□□□□ 0.59
CSGALNACT1-211ENST00000522854 PHF14O94880 888 aa18.73■□□□□ 0.59
CSGALNACT1-211ENST00000522854 NLRP10Q86W26 655 aa18.73■□□□□ 0.59
CSGALNACT1-211ENST00000522854 PROM2Q8N271 834 aa18.73■□□□□ 0.59
CSGALNACT1-211ENST00000522854 SRP68Q9UHB9 627 aaKnown RBP18.73■□□□□ 0.59
CSGALNACT1-211ENST00000522854 ERVV-1B6SEH8 477 aa18.72■□□□□ 0.59
CSGALNACT1-211ENST00000522854 MTX1Q13505 466 aa18.72■□□□□ 0.59
CSGALNACT1-211ENST00000522854 FOXO4P98177 505 aa18.72■□□□□ 0.59
CSGALNACT1-211ENST00000522854 CCDC85AQ96PX6 553 aaPredicted RBP18.72■□□□□ 0.59
CSGALNACT1-211ENST00000522854 SIL1Q9H173 461 aa18.71■□□□□ 0.59
CSGALNACT1-211ENST00000522854 IL1RAPL2Q9NP60 686 aa18.71■□□□□ 0.59
CSGALNACT1-211ENST00000522854 IBTKQ9P2D0 1353 aaPredicted RBP18.71■□□□□ 0.59
CSGALNACT1-211ENST00000522854 BCORQ6W2J9 1755 aa18.71■□□□□ 0.59
CSGALNACT1-211ENST00000522854 APBA3O96018 575 aa18.7■□□□□ 0.58
CSGALNACT1-211ENST00000522854 LMBR1LQ6UX01 489 aa18.7■□□□□ 0.58
CSGALNACT1-211ENST00000522854 ZNF34Q8IZ26 560 aa18.7■□□□□ 0.58
CSGALNACT1-211ENST00000522854 CHMP3Q9Y3E7 222 aa18.7■□□□□ 0.58
CSGALNACT1-211ENST00000522854 RPS6KA4O75676 772 aa18.7■□□□□ 0.58
CSGALNACT1-211ENST00000522854 TRIM28Q13263 835 aaKnown RBP18.7■□□□□ 0.58
CSGALNACT1-211ENST00000522854 RC3H1Q5TC82 1133 aaKnown RBP18.7■□□□□ 0.58
CSGALNACT1-211ENST00000522854 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.7■□□□□ 0.58
CSGALNACT1-211ENST00000522854 TXNRD1Q16881 649 aa18.69■□□□□ 0.58
CSGALNACT1-211ENST00000522854 SUSD4Q5VX71 490 aa18.69■□□□□ 0.58
CSGALNACT1-211ENST00000522854 USPL1Q5W0Q7 1092 aa18.69■□□□□ 0.58
CSGALNACT1-211ENST00000522854 BICDL1Q6ZP65 573 aa18.69■□□□□ 0.58
CSGALNACT1-211ENST00000522854 RTCBQ9Y3I0 505 aaKnown RBP18.69■□□□□ 0.58
CSGALNACT1-211ENST00000522854 HSP90AB3PQ58FF7 597 aa18.68■□□□□ 0.58
CSGALNACT1-211ENST00000522854 TSHZ3Q63HK5 1081 aa18.68■□□□□ 0.58
CSGALNACT1-211ENST00000522854 ARHGEF1Q92888 912 aaKnown RBP18.68■□□□□ 0.58
CSGALNACT1-211ENST00000522854 AK7Q96M32 723 aa18.68■□□□□ 0.58
CSGALNACT1-211ENST00000522854 BCL2L12Q9HB09 334 aa18.68■□□□□ 0.58
CSGALNACT1-211ENST00000522854 TRMT112Q9UI30 125 aaKnown RBP18.68■□□□□ 0.58
CSGALNACT1-211ENST00000522854 NIP7Q9Y221 180 aaKnown RBP eCLIP18.68■□□□□ 0.58
CSGALNACT1-211ENST00000522854 C4AP0C0L4 1744 aa18.68■□□□□ 0.58
CSGALNACT1-211ENST00000522854 RABL6Q3YEC7 729 aaPredicted RBP18.68■□□□□ 0.58
CSGALNACT1-211ENST00000522854 ZBTB38Q8NAP3 1195 aaPredicted RBP18.68■□□□□ 0.58
CSGALNACT1-211ENST00000522854 LRRCC1Q9C099 1032 aa18.68■□□□□ 0.58
CSGALNACT1-211ENST00000522854 PCCAP05165 728 aaPredicted RBP18.67■□□□□ 0.58
CSGALNACT1-211ENST00000522854 HDAC5Q9UQL6 1122 aa18.67■□□□□ 0.58
CSGALNACT1-211ENST00000522854 TNS1Q9HBL0 1735 aaKnown RBP18.67■□□□□ 0.58
CSGALNACT1-211ENST00000522854 RFX5P48382 616 aaPredicted RBP18.66■□□□□ 0.58
CSGALNACT1-211ENST00000522854 OS9Q13438 667 aaPredicted RBP18.66■□□□□ 0.58
CSGALNACT1-211ENST00000522854 NUTM1Q86Y26 1132 aa18.66■□□□□ 0.58
CSGALNACT1-211ENST00000522854 PLEKHM2Q8IWE5 1019 aa18.66■□□□□ 0.58
CSGALNACT1-211ENST00000522854 ZBTB47Q9UFB7 747 aaPredicted RBP18.66■□□□□ 0.58
CSGALNACT1-211ENST00000522854 SCN7AQ01118 1682 aa18.66■□□□□ 0.58
CSGALNACT1-211ENST00000522854 C8orf34Q49A92 452 aa18.66■□□□□ 0.58
CSGALNACT1-211ENST00000522854 UBR3Q6ZT12 1888 aa18.66■□□□□ 0.58
CSGALNACT1-211ENST00000522854 RHPN1Q8TCX5 695 aa18.66■□□□□ 0.58
CSGALNACT1-211ENST00000522854 ZNF594Q96JF6 807 aaPredicted RBP18.66■□□□□ 0.58
CSGALNACT1-211ENST00000522854 TBC1D9BQ66K14 1250 aa18.65■□□□□ 0.58
CSGALNACT1-211ENST00000522854 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.64■□□□□ 0.58
CSGALNACT1-211ENST00000522854 PTPN12Q05209 780 aaKnown RBP18.64■□□□□ 0.58
CSGALNACT1-211ENST00000522854 SLC27A3Q5K4L6 730 aa18.64■□□□□ 0.58
CSGALNACT1-211ENST00000522854 NARFQ9UHQ1 456 aa18.64■□□□□ 0.58
CSGALNACT1-211ENST00000522854 IRS4O14654 1257 aaPredicted RBP18.64■□□□□ 0.57
CSGALNACT1-211ENST00000522854 HCLS1P14317 486 aaPredicted RBP18.64■□□□□ 0.57
CSGALNACT1-211ENST00000522854 BACH2Q9BYV9 841 aa18.64■□□□□ 0.57
CSGALNACT1-211ENST00000522854 NOP58Q9Y2X3 529 aaKnown RBP18.64■□□□□ 0.57
CSGALNACT1-211ENST00000522854 ZPR1O75312 459 aa18.63■□□□□ 0.57
CSGALNACT1-211ENST00000522854 FAM161AQ3B820 660 aa18.63■□□□□ 0.57
CSGALNACT1-211ENST00000522854 TRAPPC3LQ5T215 181 aa18.63■□□□□ 0.57
CSGALNACT1-211ENST00000522854 ILDR1Q86SU0 546 aaPredicted RBP18.63■□□□□ 0.57
CSGALNACT1-211ENST00000522854 SASH1O94885 1247 aa18.62■□□□□ 0.57
CSGALNACT1-211ENST00000522854 ZNF827Q17R98 1081 aa18.62■□□□□ 0.57
CSGALNACT1-211ENST00000522854 MYH3P11055 1940 aa18.62■□□□□ 0.57
CSGALNACT1-211ENST00000522854 PLSCR1O15162 318 aa18.62■□□□□ 0.57
CSGALNACT1-211ENST00000522854 RFC4P35249 363 aa18.62■□□□□ 0.57
CSGALNACT1-211ENST00000522854 CCDC24Q8N4L8 307 aa18.62■□□□□ 0.57
CSGALNACT1-211ENST00000522854 ZNF652Q9Y2D9 606 aa18.62■□□□□ 0.57
CSGALNACT1-211ENST00000522854 NTSR2O95665 410 aa18.61■□□□□ 0.57
CSGALNACT1-211ENST00000522854 GSPT1P15170 499 aaKnown RBP18.61■□□□□ 0.57
CSGALNACT1-211ENST00000522854 UTP14AQ9BVJ6 771 aaKnown RBP18.61■□□□□ 0.57
CSGALNACT1-211ENST00000522854 RBM19Q9Y4C8 960 aaKnown RBP18.61■□□□□ 0.57
CSGALNACT1-211ENST00000522854 RAB11FIP3O75154 756 aa18.61■□□□□ 0.57
CSGALNACT1-211ENST00000522854 G3BP1Q13283 466 aaKnown RBP eCLIP18.61■□□□□ 0.57
CSGALNACT1-211ENST00000522854 CLEC4GQ6UXB4 293 aa18.61■□□□□ 0.57
CSGALNACT1-211ENST00000522854 KIF1BPQ96EK5 621 aa18.61■□□□□ 0.57
CSGALNACT1-211ENST00000522854 GREM2Q9H772 168 aa18.61■□□□□ 0.57
CSGALNACT1-211ENST00000522854 CDHR2Q9BYE9 1310 aa18.61■□□□□ 0.57
CSGALNACT1-211ENST00000522854 USP42Q9H9J4 1324 aaKnown RBP18.61■□□□□ 0.57
CSGALNACT1-211ENST00000522854 DDX60Q8IY21 1712 aaKnown RBP18.6■□□□□ 0.57
CSGALNACT1-211ENST00000522854 SH3TC1Q8TE82 1336 aa18.6■□□□□ 0.57
CSGALNACT1-211ENST00000522854 TTLL11Q8NHH1 800 aa18.6■□□□□ 0.57
CSGALNACT1-211ENST00000522854 PUS3Q9BZE2 481 aaKnown RBP18.6■□□□□ 0.57
CSGALNACT1-211ENST00000522854 COPRSQ9NQ92 184 aa18.6■□□□□ 0.57
CSGALNACT1-211ENST00000522854 SALL3Q9BXA9 1300 aa18.59■□□□□ 0.57
CSGALNACT1-211ENST00000522854 SEC24BO95487 1268 aa18.59■□□□□ 0.57
CSGALNACT1-211ENST00000522854 EN1Q05925 392 aaPredicted RBP18.59■□□□□ 0.57
CSGALNACT1-211ENST00000522854 LRRC24Q50LG9 513 aa18.59■□□□□ 0.57
CSGALNACT1-211ENST00000522854 PLA2G12BQ9BX93 195 aa18.59■□□□□ 0.57
CSGALNACT1-211ENST00000522854 PDE1AP54750 535 aa18.59■□□□□ 0.57
CSGALNACT1-211ENST00000522854 CTSWP56202 376 aa18.59■□□□□ 0.57
CSGALNACT1-211ENST00000522854 ERFEQ4G0M1 354 aa18.59■□□□□ 0.57
CSGALNACT1-211ENST00000522854 PARP10Q53GL7 1025 aa18.59■□□□□ 0.57
CSGALNACT1-211ENST00000522854 GOLGB1Q14789 3259 aaKnown RBP18.58■□□□□ 0.57
CSGALNACT1-211ENST00000522854 TUBGCP6Q96RT7 1819 aa18.58■□□□□ 0.57
CSGALNACT1-211ENST00000522854 CSF1RP07333 972 aa18.58■□□□□ 0.56
CSGALNACT1-211ENST00000522854 EZH2Q15910 746 aaKnown RBP18.58■□□□□ 0.56
CSGALNACT1-211ENST00000522854 C3orf67Q6ZVT6 689 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms