RNA–Protein interactions for RNA: ENST00000522788.5

HOXA3-206, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-206ENST00000522788 TAOK3Q9H2K8 898 aa27.96■■■□□ 2.07
HOXA3-206ENST00000522788 ALDH1B1P30837 517 aa27.95■■■□□ 2.06
HOXA3-206ENST00000522788 SLC10A5Q5PT55 438 aa27.95■■■□□ 2.06
HOXA3-206ENST00000522788 OLFM4Q6UX06 510 aa27.95■■■□□ 2.06
HOXA3-206ENST00000522788 PLBD2Q8NHP8 589 aa27.95■■■□□ 2.06
HOXA3-206ENST00000522788 HOXA10P31260 410 aaPredicted RBP27.94■■■□□ 2.06
HOXA3-206ENST00000522788 HYPKQ9NX55 129 aa27.94■■■□□ 2.06
HOXA3-206ENST00000522788 ARFGEF2Q9Y6D5 1785 aa27.94■■■□□ 2.06
HOXA3-206ENST00000522788 KDM2BQ8NHM5 1336 aa27.93■■■□□ 2.06
HOXA3-206ENST00000522788 CCDC93Q567U6 631 aa27.93■■■□□ 2.06
HOXA3-206ENST00000522788 ANKRD13DQ6ZTN6 518 aa27.93■■■□□ 2.06
HOXA3-206ENST00000522788 FER1L6Q2WGJ9 1857 aa27.92■■■□□ 2.06
HOXA3-206ENST00000522788 TSPYL6Q8N831 410 aa27.92■■■□□ 2.06
HOXA3-206ENST00000522788 TSR2Q969E8 191 aaKnown RBP27.91■■■□□ 2.06
HOXA3-206ENST00000522788 ISCA1Q9BUE6 129 aa27.91■■■□□ 2.06
HOXA3-206ENST00000522788 RNF123Q5XPI4 1314 aa27.91■■■□□ 2.06
HOXA3-206ENST00000522788 GLTPD2A6NH11 291 aa27.9■■■□□ 2.06
HOXA3-206ENST00000522788 SYNE4Q8N205 404 aa27.9■■■□□ 2.06
HOXA3-206ENST00000522788 PHAXQ9H814 394 aaKnown RBP27.9■■■□□ 2.06
HOXA3-206ENST00000522788 RRAGCQ9HB90 399 aa27.9■■■□□ 2.06
HOXA3-206ENST00000522788 TOMM70O94826 608 aa27.89■■■□□ 2.06
HOXA3-206ENST00000522788 RPGRQ92834 1020 aaKnown RBP27.89■■■□□ 2.06
HOXA3-206ENST00000522788 NLRP3Q96P20 1036 aa27.89■■■□□ 2.06
HOXA3-206ENST00000522788 CRAMP1Q96RY5 1269 aa27.89■■■□□ 2.06
HOXA3-206ENST00000522788 SNED1Q8TER0 1413 aa27.89■■■□□ 2.06
HOXA3-206ENST00000522788 IL16Q14005 1332 aa27.89■■■□□ 2.05
HOXA3-206ENST00000522788 FKBP4Q02790 459 aaKnown RBP eCLIP27.88■■■□□ 2.05
HOXA3-206ENST00000522788 RTKN2Q8IZC4 609 aa27.87■■■□□ 2.05
HOXA3-206ENST00000522788 RBM17Q96I25 401 aaKnown RBP27.87■■■□□ 2.05
HOXA3-206ENST00000522788 TRMT112Q9UI30 125 aaKnown RBP27.87■■■□□ 2.05
HOXA3-206ENST00000522788 CACNA1SQ13698 1873 aa27.87■■■□□ 2.05
HOXA3-206ENST00000522788 SLC51AQ86UW1 340 aa27.86■■■□□ 2.05
HOXA3-206ENST00000522788 ATP5J2-PTCD1G3V325 749 aa27.85■■■□□ 2.05
HOXA3-206ENST00000522788 HCLS1P14317 486 aaPredicted RBP27.85■■■□□ 2.05
HOXA3-206ENST00000522788 CCDC30Q5VVM6 783 aa27.85■■■□□ 2.05
HOXA3-206ENST00000522788 ZNF428Q96B54 188 aa27.85■■■□□ 2.05
HOXA3-206ENST00000522788 SH3TC1Q8TE82 1336 aa27.85■■■□□ 2.05
HOXA3-206ENST00000522788 ANKRD36CQ5JPF3 1778 aa27.84■■■□□ 2.05
HOXA3-206ENST00000522788 TRIM28Q13263 835 aaKnown RBP27.84■■■□□ 2.05
HOXA3-206ENST00000522788 ZNF277Q9NRM2 450 aaPredicted RBP27.84■■■□□ 2.05
HOXA3-206ENST00000522788 SALL2Q9Y467 1007 aaPredicted RBP27.84■■■□□ 2.05
HOXA3-206ENST00000522788 HSPA6P17066 643 aa27.83■■■□□ 2.05
HOXA3-206ENST00000522788 FAM9BQ8IZU0 186 aa27.83■■■□□ 2.05
HOXA3-206ENST00000522788 TIAM2Q8IVF5 1701 aa27.82■■■□□ 2.04
HOXA3-206ENST00000522788 POTECB2RU33 542 aa27.82■■■□□ 2.04
HOXA3-206ENST00000522788 GOLGA2Q08379 1002 aa27.82■■■□□ 2.04
HOXA3-206ENST00000522788 CC2D2BQ6DHV5 1058 aa27.82■■■□□ 2.04
HOXA3-206ENST00000522788 RIC3Q7Z5B4 369 aa27.82■■■□□ 2.04
HOXA3-206ENST00000522788 WDR63Q8IWG1 891 aa27.82■■■□□ 2.04
HOXA3-206ENST00000522788 RBM46Q8TBY0 533 aaKnown RBP27.82■■■□□ 2.04
HOXA3-206ENST00000522788 CCDC88AQ3V6T2 1871 aa27.81■■■□□ 2.04
HOXA3-206ENST00000522788 DPY19L2Q6NUT2 758 aa27.81■■■□□ 2.04
HOXA3-206ENST00000522788 PSMD1Q99460 953 aa27.81■■■□□ 2.04
HOXA3-206ENST00000522788 CHMP4AQ9BY43 222 aa27.81■■■□□ 2.04
HOXA3-206ENST00000522788 PPEF1O14829 653 aaPredicted RBP27.8■■■□□ 2.04
HOXA3-206ENST00000522788 TWISTNBQ3B726 338 aaPredicted RBP27.8■■■□□ 2.04
HOXA3-206ENST00000522788 FAM89AQ96GI7 184 aa27.8■■■□□ 2.04
HOXA3-206ENST00000522788 ABCC4O15439 1325 aa27.8■■■□□ 2.04
HOXA3-206ENST00000522788 FANCIQ9NVI1 1328 aa27.79■■■□□ 2.04
HOXA3-206ENST00000522788 VEGFAP15692 232 aaPredicted RBP27.79■■■□□ 2.04
HOXA3-206ENST00000522788 C16orf71Q8IYS4 520 aaPredicted RBP27.79■■■□□ 2.04
HOXA3-206ENST00000522788 TCERG1O14776 1098 aaKnown RBP27.78■■■□□ 2.04
HOXA3-206ENST00000522788 IARSP41252 1262 aaKnown RBP27.78■■■□□ 2.04
HOXA3-206ENST00000522788 DICER1Q9UPY3 1922 aaKnown RBP27.77■■■□□ 2.04
HOXA3-206ENST00000522788 DDNO94850 711 aaPredicted RBP27.77■■■□□ 2.04
HOXA3-206ENST00000522788 SPINK5Q9NQ38 1064 aaPredicted RBP27.77■■■□□ 2.04
HOXA3-206ENST00000522788 ATP6V0A2Q9Y487 856 aa27.77■■■□□ 2.04
HOXA3-206ENST00000522788 GRIPAP1Q4V328 841 aa27.76■■■□□ 2.03
HOXA3-206ENST00000522788 MYD88Q99836 296 aa27.76■■■□□ 2.03
HOXA3-206ENST00000522788 METTL22Q9BUU2 404 aaPredicted RBP27.75■■■□□ 2.03
HOXA3-206ENST00000522788 BBOX1O75936 387 aa27.74■■■□□ 2.03
HOXA3-206ENST00000522788 GRAPQ13588 217 aa27.74■■■□□ 2.03
HOXA3-206ENST00000522788 SF3B3Q15393 1217 aaKnown RBP27.74■■■□□ 2.03
HOXA3-206ENST00000522788 RTL5Q5HYW3 569 aaPredicted RBP27.74■■■□□ 2.03
HOXA3-206ENST00000522788 GRAPLQ8TC17 118 aaPredicted RBP27.74■■■□□ 2.03
HOXA3-206ENST00000522788 WDR90Q96KV7 1748 aa27.74■■■□□ 2.03
HOXA3-206ENST00000522788 ZNF541Q9H0D2 1346 aa27.73■■■□□ 2.03
HOXA3-206ENST00000522788 DDX58O95786 925 aaKnown RBP27.73■■■□□ 2.03
HOXA3-206ENST00000522788 FSTL1Q12841 308 aa27.73■■■□□ 2.03
HOXA3-206ENST00000522788 DDX46Q7L014 1031 aaKnown RBP27.73■■■□□ 2.03
HOXA3-206ENST00000522788 G2E3Q7L622 706 aa27.73■■■□□ 2.03
HOXA3-206ENST00000522788 ZBTB38Q8NAP3 1195 aaPredicted RBP27.73■■■□□ 2.03
HOXA3-206ENST00000522788 STK31Q9BXU1 1019 aa27.73■■■□□ 2.03
HOXA3-206ENST00000522788 FZD9O00144 591 aa27.72■■■□□ 2.03
HOXA3-206ENST00000522788 IRS4O14654 1257 aaPredicted RBP27.72■■■□□ 2.03
HOXA3-206ENST00000522788 VAMP4O75379 141 aa27.72■■■□□ 2.03
HOXA3-206ENST00000522788 KSR2Q6VAB6 950 aa27.72■■■□□ 2.03
HOXA3-206ENST00000522788 SP8Q8IXZ3 490 aa27.72■■■□□ 2.03
HOXA3-206ENST00000522788 CCDC191Q8NCU4 936 aa27.72■■■□□ 2.03
HOXA3-206ENST00000522788 MAP3K2Q9Y2U5 619 aa27.72■■■□□ 2.03
HOXA3-206ENST00000522788 PI4KAP2A4QPH2 592 aa27.71■■■□□ 2.03
HOXA3-206ENST00000522788 SLC4A2P04920 1241 aa27.71■■■□□ 2.03
HOXA3-206ENST00000522788 EXOSC9Q06265 439 aaKnown RBP27.71■■■□□ 2.03
HOXA3-206ENST00000522788 PI4KAP1Q8N8J0 262 aa27.71■■■□□ 2.03
HOXA3-206ENST00000522788 COL4A5P29400 1685 aa27.71■■■□□ 2.03
HOXA3-206ENST00000522788 LAMB2P55268 1798 aa27.7■■■□□ 2.02
HOXA3-206ENST00000522788 IGKV5-2P06315 115 aa27.69■■■□□ 2.02
HOXA3-206ENST00000522788 SMC1BQ8NDV3 1235 aa27.69■■■□□ 2.02
HOXA3-206ENST00000522788 L3MBTL3Q96JM7 780 aaPredicted RBP27.69■■■□□ 2.02
HOXA3-206ENST00000522788 RTFDC1Q9BY42 306 aaPredicted RBP27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms