RNA–Protein interactions for RNA: ENST00000522502.1

CLU-213, Transcript of clusterin, human

TSL 2

Gene CLU, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLU-213	ENST00000522502	AIMP1	Q12904	312 aa	Known RBP	13.34	□□□□□ -0.27
CLU-213	ENST00000522502	CRY2	Q49AN0	593 aa		13.34	□□□□□ -0.27
CLU-213	ENST00000522502	MAP1S	Q66K74	1059 aa	Predicted RBP	13.34	□□□□□ -0.27
CLU-213	ENST00000522502	KIF6	Q6ZMV9	814 aa		13.34	□□□□□ -0.27
CLU-213	ENST00000522502	MAPK8IP3	Q9UPT6	1336 aa		13.34	□□□□□ -0.27
CLU-213	ENST00000522502	SCN4A	P35499	1836 aa		13.34	□□□□□ -0.27
CLU-213	ENST00000522502	ADAMTSL1	Q8N6G6	1762 aa		13.33	□□□□□ -0.28
CLU-213	ENST00000522502	ERVV-1	B6SEH8	477 aa		13.33	□□□□□ -0.28
CLU-213	ENST00000522502	ITGBL1	O95965	494 aa	Predicted RBP	13.33	□□□□□ -0.28
CLU-213	ENST00000522502	GJA3	Q9Y6H8	435 aa		13.33	□□□□□ -0.28
CLU-213	ENST00000522502	PASK	Q96RG2	1323 aa		13.33	□□□□□ -0.28
CLU-213	ENST00000522502	FZD9	O00144	591 aa		13.32	□□□□□ -0.28
CLU-213	ENST00000522502	HCLS1	P14317	486 aa	Predicted RBP	13.32	□□□□□ -0.28
CLU-213	ENST00000522502	PNISR	Q8TF01	805 aa	Known RBP	13.32	□□□□□ -0.28
CLU-213	ENST00000522502	XAGE3	Q8WTP9	111 aa		13.32	□□□□□ -0.28
CLU-213	ENST00000522502	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.32	□□□□□ -0.28
CLU-213	ENST00000522502	TRIM35	Q9UPQ4	493 aa		13.32	□□□□□ -0.28
CLU-213	ENST00000522502	CLEC11A	Q9Y240	323 aa		13.32	□□□□□ -0.28
CLU-213	ENST00000522502	LAS1L	Q9Y4W2	734 aa	Known RBP	13.32	□□□□□ -0.28
CLU-213	ENST00000522502	ALDH1B1	P30837	517 aa		13.31	□□□□□ -0.28
CLU-213	ENST00000522502	EPHX2	P34913	555 aa		13.31	□□□□□ -0.28
CLU-213	ENST00000522502	EPS15	P42566	896 aa		13.31	□□□□□ -0.28
CLU-213	ENST00000522502	SOGA3	Q5TF21	947 aa		13.31	□□□□□ -0.28
CLU-213	ENST00000522502	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.31	□□□□□ -0.28
CLU-213	ENST00000522502	COPS6	Q7L5N1	327 aa		13.31	□□□□□ -0.28
CLU-213	ENST00000522502	RTKN2	Q8IZC4	609 aa		13.31	□□□□□ -0.28
CLU-213	ENST00000522502	RPGR	Q92834	1020 aa	Known RBP	13.31	□□□□□ -0.28
CLU-213	ENST00000522502	ANKRD36C	Q5JPF3	1778 aa		13.3	□□□□□ -0.28
CLU-213	ENST00000522502	SHTN1	A0MZ66	631 aa		13.3	□□□□□ -0.28
CLU-213	ENST00000522502	PPEF1	O14829	653 aa	Predicted RBP	13.3	□□□□□ -0.28
CLU-213	ENST00000522502	NEFM	P07197	916 aa		13.3	□□□□□ -0.28
CLU-213	ENST00000522502	HOXA10	P31260	410 aa	Predicted RBP	13.3	□□□□□ -0.28
CLU-213	ENST00000522502	HACL1	Q9UJ83	578 aa		13.3	□□□□□ -0.28
CLU-213	ENST00000522502	VEGFB	P49765	207 aa		13.29	□□□□□ -0.28
CLU-213	ENST00000522502	SCNN1D	P51172	638 aa		13.29	□□□□□ -0.28
CLU-213	ENST00000522502	AOC3	Q16853	763 aa		13.29	□□□□□ -0.28
CLU-213	ENST00000522502	DLK2	Q6UY11	383 aa		13.29	□□□□□ -0.28
CLU-213	ENST00000522502	LDHD	Q86WU2	507 aa		13.29	□□□□□ -0.28
CLU-213	ENST00000522502	TNS4	Q8IZW8	715 aa		13.29	□□□□□ -0.28
CLU-213	ENST00000522502	NYX	Q9GZU5	481 aa		13.29	□□□□□ -0.28
CLU-213	ENST00000522502	CREBZF	Q9NS37	354 aa		13.29	□□□□□ -0.28
CLU-213	ENST00000522502	ADAMTS8	Q9UP79	889 aa		13.29	□□□□□ -0.28
CLU-213	ENST00000522502	ABCC4	O15439	1325 aa		13.29	□□□□□ -0.28
CLU-213	ENST00000522502	TRAF5	O00463	557 aa		13.28	□□□□□ -0.28
CLU-213	ENST00000522502	RGL2	O15211	777 aa		13.28	□□□□□ -0.28
CLU-213	ENST00000522502	FOXN1	O15353	648 aa		13.28	□□□□□ -0.28
CLU-213	ENST00000522502	RTL5	Q5HYW3	569 aa	Predicted RBP	13.28	□□□□□ -0.28
CLU-213	ENST00000522502	CNTROB	Q8N137	903 aa		13.28	□□□□□ -0.28
CLU-213	ENST00000522502	PSMD1	Q99460	953 aa		13.28	□□□□□ -0.28
CLU-213	ENST00000522502	CHPF2	Q9P2E5	772 aa		13.28	□□□□□ -0.28
CLU-213	ENST00000522502	RIC1	Q4ADV7	1423 aa		13.28	□□□□□ -0.28
CLU-213	ENST00000522502	ATP5J2-PTCD1	G3V325	749 aa		13.27	□□□□□ -0.29
CLU-213	ENST00000522502	NLRP10	Q86W26	655 aa		13.27	□□□□□ -0.29
CLU-213	ENST00000522502	LARGE2	Q8N3Y3	721 aa		13.27	□□□□□ -0.29
CLU-213	ENST00000522502	RBM17	Q96I25	401 aa	Known RBP	13.27	□□□□□ -0.29
CLU-213	ENST00000522502	UTP14A	Q9BVJ6	771 aa	Known RBP	13.27	□□□□□ -0.29
CLU-213	ENST00000522502	CNTNAP1	P78357	1384 aa		13.27	□□□□□ -0.29
CLU-213	ENST00000522502	DDX60	Q8IY21	1712 aa	Known RBP	13.27	□□□□□ -0.29
CLU-213	ENST00000522502	IQCA1L	A6NCM1	817 aa		13.26	□□□□□ -0.29
CLU-213	ENST00000522502	CHL1	O00533	1208 aa		13.26	□□□□□ -0.29
CLU-213	ENST00000522502	RALBP1	Q15311	655 aa		13.26	□□□□□ -0.29
CLU-213	ENST00000522502	JARID2	Q92833	1246 aa	Predicted RBP	13.26	□□□□□ -0.29
CLU-213	ENST00000522502	GPR101	Q96P66	508 aa	Predicted RBP	13.26	□□□□□ -0.29
CLU-213	ENST00000522502	CRAMP1	Q96RY5	1269 aa		13.26	□□□□□ -0.29
CLU-213	ENST00000522502	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.25	□□□□□ -0.29
CLU-213	ENST00000522502	PPIP5K2	O43314	1243 aa		13.25	□□□□□ -0.29
CLU-213	ENST00000522502	SLC10A5	Q5PT55	438 aa		13.25	□□□□□ -0.29
CLU-213	ENST00000522502	PPP1R42	Q7Z4L9	355 aa		13.25	□□□□□ -0.29
CLU-213	ENST00000522502	GPC2	Q8N158	579 aa		13.25	□□□□□ -0.29
CLU-213	ENST00000522502	JDP2	Q8WYK2	163 aa		13.25	□□□□□ -0.29
CLU-213	ENST00000522502	NLRP3	Q96P20	1036 aa		13.25	□□□□□ -0.29
CLU-213	ENST00000522502	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.24	□□□□□ -0.29
CLU-213	ENST00000522502	TMEM88B	A6NKF7	163 aa		13.24	□□□□□ -0.29
CLU-213	ENST00000522502	ELL2	O00472	640 aa	Predicted RBP	13.24	□□□□□ -0.29
CLU-213	ENST00000522502	EIF6	P56537	245 aa	Known RBP	13.24	□□□□□ -0.29
CLU-213	ENST00000522502	CXCL9	Q07325	125 aa		13.24	□□□□□ -0.29
CLU-213	ENST00000522502	TCIRG1	Q13488	830 aa		13.24	□□□□□ -0.29
CLU-213	ENST00000522502	CCDC184	Q52MB2	194 aa		13.24	□□□□□ -0.29
CLU-213	ENST00000522502	FAM89A	Q96GI7	184 aa		13.24	□□□□□ -0.29
CLU-213	ENST00000522502	KCNQ5	Q9NR82	932 aa		13.24	□□□□□ -0.29
CLU-213	ENST00000522502	TRMT112	Q9UI30	125 aa	Known RBP	13.24	□□□□□ -0.29
CLU-213	ENST00000522502	ATP6V0A2	Q9Y487	856 aa		13.24	□□□□□ -0.29
CLU-213	ENST00000522502	DUOX1	Q9NRD9	1551 aa		13.24	□□□□□ -0.29
CLU-213	ENST00000522502	ERBB4	Q15303	1308 aa		13.23	□□□□□ -0.29
CLU-213	ENST00000522502	YDJC	A8MPS7	323 aa		13.23	□□□□□ -0.29
CLU-213	ENST00000522502	RAD17	O75943	681 aa		13.23	□□□□□ -0.29
CLU-213	ENST00000522502	GRM1	Q13255	1194 aa		13.23	□□□□□ -0.29
CLU-213	ENST00000522502	CST9	Q5W186	159 aa		13.23	□□□□□ -0.29
CLU-213	ENST00000522502	CELF1	Q92879	486 aa	Known RBP	13.23	□□□□□ -0.29
CLU-213	ENST00000522502	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
CLU-213	ENST00000522502	POLR2A	P24928	1970 aa	Known RBP	13.23	□□□□□ -0.29
CLU-213	ENST00000522502	GMPS	P49915	693 aa	Predicted RBP	13.22	□□□□□ -0.29
CLU-213	ENST00000522502	HIRA	P54198	1017 aa	Predicted RBP	13.22	□□□□□ -0.29
CLU-213	ENST00000522502	PARP10	Q53GL7	1025 aa		13.22	□□□□□ -0.29
CLU-213	ENST00000522502	NIM1K	Q8IY84	436 aa		13.22	□□□□□ -0.29
CLU-213	ENST00000522502	RUNDC1	Q96C34	613 aa		13.22	□□□□□ -0.29
CLU-213	ENST00000522502	PNN	Q9H307	717 aa	Known RBP	13.22	□□□□□ -0.29
CLU-213	ENST00000522502	PHAX	Q9H814	394 aa	Known RBP	13.22	□□□□□ -0.29
CLU-213	ENST00000522502	MBIP	Q9NS73	344 aa		13.22	□□□□□ -0.29
CLU-213	ENST00000522502	HDGFL1	Q5TGJ6	251 aa		13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms