RNA–Protein interactions for RNA: ENST00000522480.5

SMG1P3-205, Transcript of SMG1 pseudogene 3, humanhuman

BASIC

Gene SMG1P3, Length 4,262 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-205ENST00000522480 UBN2Q6ZU65 1347 aa13.48□□□□□ -0.25
SMG1P3-205ENST00000522480 GNPATO15228 680 aa13.48□□□□□ -0.25
SMG1P3-205ENST00000522480 RABL6Q3YEC7 729 aaPredicted RBP13.48□□□□□ -0.25
SMG1P3-205ENST00000522480 NLRP10Q86W26 655 aa13.48□□□□□ -0.25
SMG1P3-205ENST00000522480 TBC1D2BQ9UPU7 963 aa13.48□□□□□ -0.25
SMG1P3-205ENST00000522480 USP42Q9H9J4 1324 aaKnown RBP13.48□□□□□ -0.25
SMG1P3-205ENST00000522480 PCCAP05165 728 aaPredicted RBP13.47□□□□□ -0.25
SMG1P3-205ENST00000522480 SUCLG2Q96I99 432 aa13.47□□□□□ -0.25
SMG1P3-205ENST00000522480 SSH3Q8TE77 659 aa13.47□□□□□ -0.25
SMG1P3-205ENST00000522480 ATP5J2-PTCD1G3V325 749 aa13.47□□□□□ -0.25
SMG1P3-205ENST00000522480 CCDC125Q86Z20 511 aa13.47□□□□□ -0.25
SMG1P3-205ENST00000522480 AK7Q96M32 723 aa13.47□□□□□ -0.25
SMG1P3-205ENST00000522480 C9orf78Q9NZ63 289 aaPredicted RBP13.47□□□□□ -0.25
SMG1P3-205ENST00000522480 ARHGEF1Q92888 912 aaKnown RBP13.47□□□□□ -0.25
SMG1P3-205ENST00000522480 GCC1Q96CN9 775 aa13.47□□□□□ -0.25
SMG1P3-205ENST00000522480 DCTPP1Q9H773 170 aa13.47□□□□□ -0.25
SMG1P3-205ENST00000522480 ZBTB38Q8NAP3 1195 aaPredicted RBP13.46□□□□□ -0.25
SMG1P3-205ENST00000522480 RIC1Q4ADV7 1423 aa13.46□□□□□ -0.25
SMG1P3-205ENST00000522480 PARP10Q53GL7 1025 aa13.46□□□□□ -0.25
SMG1P3-205ENST00000522480 ZNF652Q9Y2D9 606 aa13.46□□□□□ -0.25
SMG1P3-205ENST00000522480 TNRC6CQ9HCJ0 1690 aaKnown RBP13.46□□□□□ -0.26
SMG1P3-205ENST00000522480 FOXO4P98177 505 aa13.45□□□□□ -0.26
SMG1P3-205ENST00000522480 ZNF827Q17R98 1081 aa13.45□□□□□ -0.26
SMG1P3-205ENST00000522480 ZNF330Q9Y3S2 320 aaPredicted RBP13.45□□□□□ -0.26
SMG1P3-205ENST00000522480 TRAPPC3LQ5T215 181 aa13.44□□□□□ -0.26
SMG1P3-205ENST00000522480 SPEF2Q9C093 1822 aa13.44□□□□□ -0.26
SMG1P3-205ENST00000522480 PNMA6EA0A0J9YXQ4 647 aa13.44□□□□□ -0.26
SMG1P3-205ENST00000522480 NPM2Q86SE8 214 aaKnown RBP13.44□□□□□ -0.26
SMG1P3-205ENST00000522480 BICC1Q9H694 974 aaKnown RBP13.44□□□□□ -0.26
SMG1P3-205ENST00000522480 HMMRO75330 724 aa13.44□□□□□ -0.26
SMG1P3-205ENST00000522480 NTSR2O95665 410 aa13.44□□□□□ -0.26
SMG1P3-205ENST00000522480 ANKRD31Q8N7Z5 1873 aa13.43□□□□□ -0.26
SMG1P3-205ENST00000522480 ARAP2Q8WZ64 1704 aa13.43□□□□□ -0.26
SMG1P3-205ENST00000522480 EPHA10Q5JZY3 1008 aa13.43□□□□□ -0.26
SMG1P3-205ENST00000522480 UBE3BQ7Z3V4 1068 aa13.43□□□□□ -0.26
SMG1P3-205ENST00000522480 NOP58Q9Y2X3 529 aaKnown RBP13.43□□□□□ -0.26
SMG1P3-205ENST00000522480 USPL1Q5W0Q7 1092 aa13.43□□□□□ -0.26
SMG1P3-205ENST00000522480 NUCB1Q02818 461 aa13.42□□□□□ -0.26
SMG1P3-205ENST00000522480 EZH2Q15910 746 aaKnown RBP13.42□□□□□ -0.26
SMG1P3-205ENST00000522480 PPP1R42Q7Z4L9 355 aa13.42□□□□□ -0.26
SMG1P3-205ENST00000522480 CSF1RP07333 972 aa13.42□□□□□ -0.26
SMG1P3-205ENST00000522480 RFX5P48382 616 aaPredicted RBP13.42□□□□□ -0.26
SMG1P3-205ENST00000522480 SUSD4Q5VX71 490 aa13.42□□□□□ -0.26
SMG1P3-205ENST00000522480 FLAD1Q8NFF5 587 aa13.42□□□□□ -0.26
SMG1P3-205ENST00000522480 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.42□□□□□ -0.26
SMG1P3-205ENST00000522480 RTL9Q8NET4 1388 aa13.42□□□□□ -0.26
SMG1P3-205ENST00000522480 TBC1D9BQ66K14 1250 aa13.42□□□□□ -0.26
SMG1P3-205ENST00000522480 SRP68Q9UHB9 627 aaKnown RBP13.42□□□□□ -0.26
SMG1P3-205ENST00000522480 BAG6P46379 1132 aa13.41□□□□□ -0.26
SMG1P3-205ENST00000522480 PNPLA7Q6ZV29 1317 aa13.41□□□□□ -0.26
SMG1P3-205ENST00000522480 ZPR1O75312 459 aa13.41□□□□□ -0.26
SMG1P3-205ENST00000522480 EN1Q05925 392 aaPredicted RBP13.41□□□□□ -0.26
SMG1P3-205ENST00000522480 SMIM5Q71RC9 77 aa13.41□□□□□ -0.26
SMG1P3-205ENST00000522480 KIF13BQ9NQT8 1826 aa13.4□□□□□ -0.26
SMG1P3-205ENST00000522480 GYS1P13807 737 aa13.4□□□□□ -0.26
SMG1P3-205ENST00000522480 RFC4P35249 363 aa13.4□□□□□ -0.26
SMG1P3-205ENST00000522480 UTP14AQ9BVJ6 771 aaKnown RBP13.4□□□□□ -0.26
SMG1P3-205ENST00000522480 GPTP24298 496 aa13.4□□□□□ -0.26
SMG1P3-205ENST00000522480 PDZRN3Q9UPQ7 1066 aa13.4□□□□□ -0.26
SMG1P3-205ENST00000522480 NIP7Q9Y221 180 aaKnown RBP eCLIP13.4□□□□□ -0.26
SMG1P3-205ENST00000522480 CARMIL3Q8ND23 1372 aa13.4□□□□□ -0.26
SMG1P3-205ENST00000522480 SLC10A5Q5PT55 438 aa13.4□□□□□ -0.26
SMG1P3-205ENST00000522480 TM4SF1P30408 202 aa13.39□□□□□ -0.27
SMG1P3-205ENST00000522480 DLEC1Q9Y238 1755 aa13.39□□□□□ -0.27
SMG1P3-205ENST00000522480 COL4A1P02462 1669 aa13.39□□□□□ -0.27
SMG1P3-205ENST00000522480 LRRC37AA6NMS7 1700 aa13.39□□□□□ -0.27
SMG1P3-205ENST00000522480 SRGAP3O43295 1099 aa13.39□□□□□ -0.27
SMG1P3-205ENST00000522480 COPRSQ9NQ92 184 aa13.39□□□□□ -0.27
SMG1P3-205ENST00000522480 SH3TC1Q8TE82 1336 aa13.39□□□□□ -0.27
SMG1P3-205ENST00000522480 PDE8AO60658 829 aa13.38□□□□□ -0.27
SMG1P3-205ENST00000522480 RAB11FIP3O75154 756 aa13.38□□□□□ -0.27
SMG1P3-205ENST00000522480 SLC15A2Q16348 729 aa13.38□□□□□ -0.27
SMG1P3-205ENST00000522480 COL23A1Q86Y22 540 aaPredicted RBP13.38□□□□□ -0.27
SMG1P3-205ENST00000522480 FAM89AQ96GI7 184 aa13.38□□□□□ -0.27
SMG1P3-205ENST00000522480 TRMT112Q9UI30 125 aaKnown RBP13.38□□□□□ -0.27
SMG1P3-205ENST00000522480 PHF14O94880 888 aa13.38□□□□□ -0.27
SMG1P3-205ENST00000522480 SF3B2Q13435 895 aaKnown RBP13.38□□□□□ -0.27
SMG1P3-205ENST00000522480 NYXQ9GZU5 481 aa13.38□□□□□ -0.27
SMG1P3-205ENST00000522480 ANO8Q9HCE9 1232 aaPredicted RBP13.38□□□□□ -0.27
SMG1P3-205ENST00000522480 JARID2Q92833 1246 aaPredicted RBP13.38□□□□□ -0.27
SMG1P3-205ENST00000522480 ARXQ96QS3 562 aa13.38□□□□□ -0.27
SMG1P3-205ENST00000522480 CHD1LQ86WJ1 897 aa13.37□□□□□ -0.27
SMG1P3-205ENST00000522480 COL11A2P13942 1736 aaPredicted RBP13.37□□□□□ -0.27
SMG1P3-205ENST00000522480 IRS4O14654 1257 aaPredicted RBP13.37□□□□□ -0.27
SMG1P3-205ENST00000522480 CTSWP56202 376 aa13.37□□□□□ -0.27
SMG1P3-205ENST00000522480 PTPN12Q05209 780 aaKnown RBP13.37□□□□□ -0.27
SMG1P3-205ENST00000522480 HSP90B1P14625 803 aaKnown RBP13.36□□□□□ -0.27
SMG1P3-205ENST00000522480 PDE4AP27815 886 aa13.36□□□□□ -0.27
SMG1P3-205ENST00000522480 TTLL11Q8NHH1 800 aa13.36□□□□□ -0.27
SMG1P3-205ENST00000522480 ABCC12Q96J65 1359 aa13.36□□□□□ -0.27
SMG1P3-205ENST00000522480 SALL3Q9BXA9 1300 aa13.36□□□□□ -0.27
SMG1P3-205ENST00000522480 NFIXQ14938 502 aa13.36□□□□□ -0.27
SMG1P3-205ENST00000522480 LMBR1LQ6UX01 489 aa13.36□□□□□ -0.27
SMG1P3-205ENST00000522480 SYNE4Q8N205 404 aa13.36□□□□□ -0.27
SMG1P3-205ENST00000522480 FBXO3Q9UK99 471 aa13.36□□□□□ -0.27
SMG1P3-205ENST00000522480 TAF1P21675 1872 aa13.36□□□□□ -0.27
SMG1P3-205ENST00000522480 HSP90AB4PQ58FF6 505 aa13.36□□□□□ -0.27
SMG1P3-205ENST00000522480 SETDB2Q96T68 719 aa13.36□□□□□ -0.27
SMG1P3-205ENST00000522480 TFCP2L1Q9NZI6 479 aa13.36□□□□□ -0.27
SMG1P3-205ENST00000522480 KIAA1551Q9HCM1 1747 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms