RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 TMF1P82094 1093 aa11.2□□□□□ -0.62
PVT1-213ENST00000522414 SLC15A2Q16348 729 aa11.2□□□□□ -0.62
PVT1-213ENST00000522414 AMER1Q5JTC6 1135 aaPredicted RBP11.2□□□□□ -0.62
PVT1-213ENST00000522414 RBM26Q5T8P6 1007 aaKnown RBP11.2□□□□□ -0.62
PVT1-213ENST00000522414 STK32BQ9NY57 414 aa11.2□□□□□ -0.62
PVT1-213ENST00000522414 TNS2Q63HR2 1409 aa11.19□□□□□ -0.62
PVT1-213ENST00000522414 TTC24A2A3L6 582 aaPredicted RBP11.19□□□□□ -0.62
PVT1-213ENST00000522414 GPR37O15354 613 aa11.19□□□□□ -0.62
PVT1-213ENST00000522414 SNRPBP14678 240 aaKnown RBP11.19□□□□□ -0.62
PVT1-213ENST00000522414 GCGRP47871 477 aa11.19□□□□□ -0.62
PVT1-213ENST00000522414 RNF19BQ6ZMZ0 732 aa11.19□□□□□ -0.62
PVT1-213ENST00000522414 PHOX2BQ99453 314 aa11.19□□□□□ -0.62
PVT1-213ENST00000522414 CARD14Q9BXL6 1004 aa11.19□□□□□ -0.62
PVT1-213ENST00000522414 LRRC4BQ9NT99 713 aa11.19□□□□□ -0.62
PVT1-213ENST00000522414 SALL2Q9Y467 1007 aaPredicted RBP11.19□□□□□ -0.62
PVT1-213ENST00000522414 MYOM1P52179 1685 aa11.18□□□□□ -0.62
PVT1-213ENST00000522414 NHSQ6T4R5 1651 aa11.18□□□□□ -0.62
PVT1-213ENST00000522414 KCNQ4P56696 695 aa11.18□□□□□ -0.62
PVT1-213ENST00000522414 NBPF6Q5VWK0 638 aa11.18□□□□□ -0.62
PVT1-213ENST00000522414 NBPF4Q96M43 638 aa11.18□□□□□ -0.62
PVT1-213ENST00000522414 USP47Q96K76 1375 aa11.17□□□□□ -0.62
PVT1-213ENST00000522414 CLSPNQ9HAW4 1339 aa11.17□□□□□ -0.62
PVT1-213ENST00000522414 HSP90AB2PQ58FF8 381 aa11.17□□□□□ -0.62
PVT1-213ENST00000522414 USHBP1Q8N6Y0 703 aa11.17□□□□□ -0.62
PVT1-213ENST00000522414 SYTL4Q96C24 671 aaPredicted RBP11.17□□□□□ -0.62
PVT1-213ENST00000522414 ATP13A2Q9NQ11 1180 aa11.17□□□□□ -0.62
PVT1-213ENST00000522414 STK17AQ9UEE5 414 aa11.17□□□□□ -0.62
PVT1-213ENST00000522414 WNT7AO00755 349 aa11.16□□□□□ -0.62
PVT1-213ENST00000522414 GNPATO15228 680 aa11.16□□□□□ -0.62
PVT1-213ENST00000522414 MSS51Q4VC12 460 aa11.16□□□□□ -0.62
PVT1-213ENST00000522414 ZCRB1Q8TBF4 217 aaKnown RBP11.16□□□□□ -0.62
PVT1-213ENST00000522414 CASZ1Q86V15 1759 aa11.16□□□□□ -0.62
PVT1-213ENST00000522414 ANKRD36BQ8N2N9 1353 aa11.16□□□□□ -0.62
PVT1-213ENST00000522414 J3QL48 77 aa11.15□□□□□ -0.62
PVT1-213ENST00000522414 ZNF827Q17R98 1081 aa11.15□□□□□ -0.62
PVT1-213ENST00000522414 SNIP1Q8TAD8 396 aaKnown RBP11.15□□□□□ -0.62
PVT1-213ENST00000522414 TIMELESSQ9UNS1 1208 aa11.15□□□□□ -0.62
PVT1-213ENST00000522414 ANKRD26Q9UPS8 1709 aa11.15□□□□□ -0.63
PVT1-213ENST00000522414 PAPPAQ13219 1627 aa11.14□□□□□ -0.63
PVT1-213ENST00000522414 ZBTB24O43167 697 aaPredicted RBP11.14□□□□□ -0.63
PVT1-213ENST00000522414 POLR3GLQ9BT43 218 aa11.14□□□□□ -0.63
PVT1-213ENST00000522414 SHANK3Q9BYB0 1731 aa11.14□□□□□ -0.63
PVT1-213ENST00000522414 GOLGB1Q14789 3259 aaKnown RBP11.13□□□□□ -0.63
PVT1-213ENST00000522414 PPM1GO15355 546 aaPredicted RBP11.13□□□□□ -0.63
PVT1-213ENST00000522414 YY1P25490 414 aa11.13□□□□□ -0.63
PVT1-213ENST00000522414 TRIM32Q13049 653 aa11.13□□□□□ -0.63
PVT1-213ENST00000522414 CDCA8Q53HL2 280 aa11.13□□□□□ -0.63
PVT1-213ENST00000522414 MRGPRX2Q96LB1 330 aa11.13□□□□□ -0.63
PVT1-213ENST00000522414 SYT17Q9BSW7 474 aa11.13□□□□□ -0.63
PVT1-213ENST00000522414 MTFR1LQ9H019 292 aa11.13□□□□□ -0.63
PVT1-213ENST00000522414 KIF20BQ96Q89 1820 aa11.13□□□□□ -0.63
PVT1-213ENST00000522414 TESPA1A2RU30 521 aaPredicted RBP11.12□□□□□ -0.63
PVT1-213ENST00000522414 FHDC1Q9C0D6 1143 aaPredicted RBP11.12□□□□□ -0.63
PVT1-213ENST00000522414 EMILIN1Q9Y6C2 1016 aa11.12□□□□□ -0.63
PVT1-213ENST00000522414 RTL1A6NKG5 1358 aa11.12□□□□□ -0.63
PVT1-213ENST00000522414 TERTO14746 1132 aaKnown RBP11.11□□□□□ -0.63
PVT1-213ENST00000522414 RAPGEF4Q8WZA2 1011 aa11.11□□□□□ -0.63
PVT1-213ENST00000522414 TRIM47Q96LD4 638 aa11.11□□□□□ -0.63
PVT1-213ENST00000522414 RGPD2P0DJD1 1756 aa11.11□□□□□ -0.63
PVT1-213ENST00000522414 MEGF6O75095 1541 aa11.1□□□□□ -0.63
PVT1-213ENST00000522414 BTAF1O14981 1849 aa11.1□□□□□ -0.63
PVT1-213ENST00000522414 TATP17735 454 aaPredicted RBP11.1□□□□□ -0.63
PVT1-213ENST00000522414 INSM1Q01101 510 aaPredicted RBP11.1□□□□□ -0.63
PVT1-213ENST00000522414 SLC27A3Q5K4L6 730 aa11.1□□□□□ -0.63
PVT1-213ENST00000522414 HPS1Q92902 700 aa11.1□□□□□ -0.63
PVT1-213ENST00000522414 ARXQ96QS3 562 aa11.1□□□□□ -0.63
PVT1-213ENST00000522414 TFCP2L1Q9NZI6 479 aa11.1□□□□□ -0.63
PVT1-213ENST00000522414 KIF24Q5T7B8 1368 aa11.1□□□□□ -0.63
PVT1-213ENST00000522414 INSRP06213 1382 aa11.09□□□□□ -0.63
PVT1-213ENST00000522414 TNNT2P45379 298 aaPredicted RBP11.09□□□□□ -0.63
PVT1-213ENST00000522414 MMP16P51512 607 aa11.09□□□□□ -0.63
PVT1-213ENST00000522414 MPRIPQ6WCQ1 1025 aa11.09□□□□□ -0.63
PVT1-213ENST00000522414 SULF1Q8IWU6 871 aa11.09□□□□□ -0.63
PVT1-213ENST00000522414 QSER1Q2KHR3 1735 aa11.09□□□□□ -0.63
PVT1-213ENST00000522414 NCAPD2Q15021 1401 aa11.09□□□□□ -0.63
PVT1-213ENST00000522414 NSD2O96028 1365 aa11.08□□□□□ -0.64
PVT1-213ENST00000522414 CYP27B1O15528 508 aa11.08□□□□□ -0.64
PVT1-213ENST00000522414 CCNL1Q9UK58 526 aaPredicted RBP11.08□□□□□ -0.64
PVT1-213ENST00000522414 NSD3Q9BZ95 1437 aa11.08□□□□□ -0.64
PVT1-213ENST00000522414 PNPLA7Q6ZV29 1317 aa11.08□□□□□ -0.64
PVT1-213ENST00000522414 COL24A1Q17RW2 1714 aa11.07□□□□□ -0.64
PVT1-213ENST00000522414 POLKQ9UBT6 870 aa11.07□□□□□ -0.64
PVT1-213ENST00000522414 CGNL1Q0VF96 1302 aa11.07□□□□□ -0.64
PVT1-213ENST00000522414 LY75O60449 1722 aa11.06□□□□□ -0.64
PVT1-213ENST00000522414 COL23A1Q86Y22 540 aaPredicted RBP11.06□□□□□ -0.64
PVT1-213ENST00000522414 DOT1LQ8TEK3 1739 aa11.06□□□□□ -0.64
PVT1-213ENST00000522414 WASHC2AQ641Q2 1341 aa11.06□□□□□ -0.64
PVT1-213ENST00000522414 FLT4P35916 1363 aa11.05□□□□□ -0.64
PVT1-213ENST00000522414 HSPA5P11021 654 aaKnown RBP11.05□□□□□ -0.64
PVT1-213ENST00000522414 SMIM5Q71RC9 77 aa11.05□□□□□ -0.64
PVT1-213ENST00000522414 PKD1L3Q7Z443 1732 aa11.05□□□□□ -0.64
PVT1-213ENST00000522414 SMG6Q86US8 1419 aaKnown RBP11.05□□□□□ -0.64
PVT1-213ENST00000522414 CCER1Q8TC90 406 aaPredicted RBP11.05□□□□□ -0.64
PVT1-213ENST00000522414 SLC16A10Q8TF71 515 aa11.05□□□□□ -0.64
PVT1-213ENST00000522414 PANK3Q9H999 370 aa11.05□□□□□ -0.64
PVT1-213ENST00000522414 DXOO77932 396 aaKnown RBP11.04□□□□□ -0.64
PVT1-213ENST00000522414 EIF4G2P78344 907 aaKnown RBP eCLIP11.04□□□□□ -0.64
PVT1-213ENST00000522414 SKOR1P84550 965 aa11.04□□□□□ -0.64
PVT1-213ENST00000522414 PIGBQ92521 554 aa11.04□□□□□ -0.64
PVT1-213ENST00000522414 SENP2Q9HC62 589 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms