RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 NPHP1O15259 732 aa15.56■□□□□ 0.08
PABPC1-219ENST00000522387 BCL11AQ9H165 835 aa15.56■□□□□ 0.08
PABPC1-219ENST00000522387 ZNF652Q9Y2D9 606 aa15.56■□□□□ 0.08
PABPC1-219ENST00000522387 C4AP0C0L4 1744 aa15.56■□□□□ 0.08
PABPC1-219ENST00000522387 RGPD3A6NKT7 1758 aaPredicted RBP15.56■□□□□ 0.08
PABPC1-219ENST00000522387 RGPD4Q7Z3J3 1758 aa15.56■□□□□ 0.08
PABPC1-219ENST00000522387 SUSD4Q5VX71 490 aa15.56■□□□□ 0.08
PABPC1-219ENST00000522387 CCDC85AQ96PX6 553 aaPredicted RBP15.56■□□□□ 0.08
PABPC1-219ENST00000522387 CWC25Q9NXE8 425 aaPredicted RBP15.56■□□□□ 0.08
PABPC1-219ENST00000522387 ADRA2BP18089 450 aa15.55■□□□□ 0.08
PABPC1-219ENST00000522387 NLRP10Q86W26 655 aa15.55■□□□□ 0.08
PABPC1-219ENST00000522387 SETDB2Q96T68 719 aa15.55■□□□□ 0.08
PABPC1-219ENST00000522387 TRMT112Q9UI30 125 aaKnown RBP15.55■□□□□ 0.08
PABPC1-219ENST00000522387 AFDNP55196 1824 aaKnown RBP15.54■□□□□ 0.08
PABPC1-219ENST00000522387 GRM8O00222 908 aa15.54■□□□□ 0.08
PABPC1-219ENST00000522387 ZBTB7AO95365 584 aa15.54■□□□□ 0.08
PABPC1-219ENST00000522387 UBTFL1P0CB47 393 aaPredicted RBP15.54■□□□□ 0.08
PABPC1-219ENST00000522387 NFIXQ14938 502 aa15.54■□□□□ 0.08
PABPC1-219ENST00000522387 ISCA1Q9BUE6 129 aa15.54■□□□□ 0.08
PABPC1-219ENST00000522387 LRRFIP2Q9Y608 721 aaKnown RBP15.54■□□□□ 0.08
PABPC1-219ENST00000522387 GTF2E1P29083 439 aaPredicted RBP15.54■□□□□ 0.08
PABPC1-219ENST00000522387 ZNF34Q8IZ26 560 aa15.54■□□□□ 0.08
PABPC1-219ENST00000522387 ZBTB40Q9NUA8 1239 aa15.54■□□□□ 0.08
PABPC1-219ENST00000522387 HSP90AB3PQ58FF7 597 aa15.53■□□□□ 0.08
PABPC1-219ENST00000522387 CCDC191Q8NCU4 936 aa15.53■□□□□ 0.08
PABPC1-219ENST00000522387 CLEC4GQ6UXB4 293 aa15.52■□□□□ 0.08
PABPC1-219ENST00000522387 PCDHB15Q9Y5E8 787 aa15.52■□□□□ 0.08
PABPC1-219ENST00000522387 ATP10DQ9P241 1426 aa15.52■□□□□ 0.07
PABPC1-219ENST00000522387 ALDH1L1O75891 902 aa15.52■□□□□ 0.07
PABPC1-219ENST00000522387 HCLS1P14317 486 aaPredicted RBP15.52■□□□□ 0.07
PABPC1-219ENST00000522387 NBPF5PQ86XG9 351 aaPredicted RBP15.52■□□□□ 0.07
PABPC1-219ENST00000522387 ATF5Q9Y2D1 282 aaPredicted RBP15.52■□□□□ 0.07
PABPC1-219ENST00000522387 SUCLG2Q96I99 432 aa15.51■□□□□ 0.07
PABPC1-219ENST00000522387 CHMP3Q9Y3E7 222 aa15.51■□□□□ 0.07
PABPC1-219ENST00000522387 MMP10P09238 476 aa15.51■□□□□ 0.07
PABPC1-219ENST00000522387 EPHA10Q5JZY3 1008 aa15.51■□□□□ 0.07
PABPC1-219ENST00000522387 FLAD1Q8NFF5 587 aa15.51■□□□□ 0.07
PABPC1-219ENST00000522387 PXDNLA1KZ92 1463 aa15.51■□□□□ 0.07
PABPC1-219ENST00000522387 HMGB2P26583 209 aaKnown RBP15.5■□□□□ 0.07
PABPC1-219ENST00000522387 ERFEQ4G0M1 354 aa15.5■□□□□ 0.07
PABPC1-219ENST00000522387 UTP14AQ9BVJ6 771 aaKnown RBP15.5■□□□□ 0.07
PABPC1-219ENST00000522387 GNAI3P08754 354 aa15.5■□□□□ 0.07
PABPC1-219ENST00000522387 DDR1Q08345 913 aa15.5■□□□□ 0.07
PABPC1-219ENST00000522387 BICC1Q9H694 974 aaKnown RBP15.5■□□□□ 0.07
PABPC1-219ENST00000522387 BCORQ6W2J9 1755 aa15.49■□□□□ 0.07
PABPC1-219ENST00000522387 GNAI2P04899 355 aa15.49■□□□□ 0.07
PABPC1-219ENST00000522387 ZBTB38Q8NAP3 1195 aaPredicted RBP15.49■□□□□ 0.07
PABPC1-219ENST00000522387 KAZALD1Q96I82 304 aa15.49■□□□□ 0.07
PABPC1-219ENST00000522387 SCN7AQ01118 1682 aa15.49■□□□□ 0.07
PABPC1-219ENST00000522387 IRS4O14654 1257 aaPredicted RBP15.49■□□□□ 0.07
PABPC1-219ENST00000522387 PPP1R42Q7Z4L9 355 aa15.49■□□□□ 0.07
PABPC1-219ENST00000522387 H7C1W4 665 aa15.48■□□□□ 0.07
PABPC1-219ENST00000522387 NTSR2O95665 410 aa15.48■□□□□ 0.07
PABPC1-219ENST00000522387 SERPINB2P05120 415 aa15.48■□□□□ 0.07
PABPC1-219ENST00000522387 NLGN1Q8N2Q7 840 aa15.48■□□□□ 0.07
PABPC1-219ENST00000522387 PNMA6EA0A0J9YXQ4 647 aa15.48■□□□□ 0.07
PABPC1-219ENST00000522387 TRIM28Q13263 835 aaKnown RBP15.48■□□□□ 0.07
PABPC1-219ENST00000522387 ANKRD36CQ5JPF3 1778 aa15.47■□□□□ 0.07
PABPC1-219ENST00000522387 APBB1O00213 710 aa15.47■□□□□ 0.07
PABPC1-219ENST00000522387 TM4SF1P30408 202 aa15.47■□□□□ 0.07
PABPC1-219ENST00000522387 CASP7P55210 303 aa15.47■□□□□ 0.07
PABPC1-219ENST00000522387 PARP10Q53GL7 1025 aa15.47■□□□□ 0.07
PABPC1-219ENST00000522387 TPTE2Q6XPS3 522 aa15.47■□□□□ 0.07
PABPC1-219ENST00000522387 KLHDC4Q8TBB5 520 aa15.47■□□□□ 0.07
PABPC1-219ENST00000522387 SH3TC1Q8TE82 1336 aa15.47■□□□□ 0.07
PABPC1-219ENST00000522387 POLRMTO00411 1230 aaKnown RBP15.46■□□□□ 0.07
PABPC1-219ENST00000522387 PCCAP05165 728 aaPredicted RBP15.46■□□□□ 0.07
PABPC1-219ENST00000522387 LMBR1LQ6UX01 489 aa15.46■□□□□ 0.07
PABPC1-219ENST00000522387 C3orf67Q6ZVT6 689 aa15.46■□□□□ 0.07
PABPC1-219ENST00000522387 SIRT2Q8IXJ6 389 aa15.46■□□□□ 0.07
PABPC1-219ENST00000522387 CNBD1Q8NA66 436 aa15.46■□□□□ 0.07
PABPC1-219ENST00000522387 IGHDP01880 384 aa15.46■□□□□ 0.07
PABPC1-219ENST00000522387 CARMIL3Q8ND23 1372 aa15.46■□□□□ 0.07
PABPC1-219ENST00000522387 SRGAP3O43295 1099 aa15.45■□□□□ 0.06
PABPC1-219ENST00000522387 CEP85Q6P2H3 762 aa15.45■□□□□ 0.06
PABPC1-219ENST00000522387 PPP1R1BQ9UD71 204 aaPredicted RBP15.45■□□□□ 0.06
PABPC1-219ENST00000522387 ABCC12Q96J65 1359 aa15.45■□□□□ 0.06
PABPC1-219ENST00000522387 PRR5LQ6MZQ0 368 aa15.45■□□□□ 0.06
PABPC1-219ENST00000522387 KLHL34Q8N239 644 aa15.45■□□□□ 0.06
PABPC1-219ENST00000522387 WWC3Q9ULE0 1092 aa15.45■□□□□ 0.06
PABPC1-219ENST00000522387 PARP3Q9Y6F1 533 aa15.45■□□□□ 0.06
PABPC1-219ENST00000522387 SKAP1Q86WV1 359 aa15.44■□□□□ 0.06
PABPC1-219ENST00000522387 FOXO4P98177 505 aa15.44■□□□□ 0.06
PABPC1-219ENST00000522387 SIL1Q9H173 461 aa15.44■□□□□ 0.06
PABPC1-219ENST00000522387 CHMP4BQ9H444 224 aaKnown RBP15.44■□□□□ 0.06
PABPC1-219ENST00000522387 PA2G4Q9UQ80 394 aaKnown RBP15.44■□□□□ 0.06
PABPC1-219ENST00000522387 UTYO14607 1347 aa15.44■□□□□ 0.06
PABPC1-219ENST00000522387 ANKRD44Q8N8A2 993 aa15.43■□□□□ 0.06
PABPC1-219ENST00000522387 N4BP2Q86UW6 1770 aaPredicted RBP15.43■□□□□ 0.06
PABPC1-219ENST00000522387 FAM161AQ3B820 660 aa15.43■□□□□ 0.06
PABPC1-219ENST00000522387 ZNF594Q96JF6 807 aaPredicted RBP15.43■□□□□ 0.06
PABPC1-219ENST00000522387 NYXQ9GZU5 481 aa15.43■□□□□ 0.06
PABPC1-219ENST00000522387 GREM2Q9H772 168 aa15.43■□□□□ 0.06
PABPC1-219ENST00000522387 SEC31BQ9NQW1 1179 aa15.42■□□□□ 0.06
PABPC1-219ENST00000522387 EXOC6BQ9Y2D4 811 aa15.42■□□□□ 0.06
PABPC1-219ENST00000522387 PDE8AO60658 829 aa15.41■□□□□ 0.06
PABPC1-219ENST00000522387 CTSWP56202 376 aa15.41■□□□□ 0.06
PABPC1-219ENST00000522387 TTLL11Q8NHH1 800 aa15.41■□□□□ 0.06
PABPC1-219ENST00000522387 ST5P78524 1137 aa15.4■□□□□ 0.06
PABPC1-219ENST00000522387 SLC51AQ86UW1 340 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms