RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 UTP14AQ9BVJ6 771 aaKnown RBP24.05■■□□□ 1.44
TOP1MT-216ENST00000522121 HOXB7P09629 217 aa24.04■■□□□ 1.44
TOP1MT-216ENST00000522121 HOXA10P31260 410 aaPredicted RBP24.04■■□□□ 1.44
TOP1MT-216ENST00000522121 OLFM4Q6UX06 510 aa24.04■■□□□ 1.44
TOP1MT-216ENST00000522121 RBM17Q96I25 401 aaKnown RBP24.04■■□□□ 1.44
TOP1MT-216ENST00000522121 CALD1Q05682 793 aaKnown RBP24.03■■□□□ 1.44
TOP1MT-216ENST00000522121 HDGFL1Q5TGJ6 251 aa24.03■■□□□ 1.44
TOP1MT-216ENST00000522121 CC2D2BQ6DHV5 1058 aa24.03■■□□□ 1.44
TOP1MT-216ENST00000522121 NLRP3Q96P20 1036 aa24.03■■□□□ 1.44
TOP1MT-216ENST00000522121 ZNF277Q9NRM2 450 aaPredicted RBP24.03■■□□□ 1.44
TOP1MT-216ENST00000522121 DICER1Q9UPY3 1922 aaKnown RBP24.02■■□□□ 1.44
TOP1MT-216ENST00000522121 POTECB2RU33 542 aa24.02■■□□□ 1.44
TOP1MT-216ENST00000522121 APAF1O14727 1248 aa24.02■■□□□ 1.44
TOP1MT-216ENST00000522121 RNF123Q5XPI4 1314 aa24.02■■□□□ 1.44
TOP1MT-216ENST00000522121 DDNO94850 711 aaPredicted RBP24.01■■□□□ 1.43
TOP1MT-216ENST00000522121 CRAMP1Q96RY5 1269 aa24.01■■□□□ 1.43
TOP1MT-216ENST00000522121 CHPF2Q9P2E5 772 aa24.01■■□□□ 1.43
TOP1MT-216ENST00000522121 WDR90Q96KV7 1748 aa24.01■■□□□ 1.43
TOP1MT-216ENST00000522121 TCIRG1Q13488 830 aa24■■□□□ 1.43
TOP1MT-216ENST00000522121 GRIPAP1Q4V328 841 aa24■■□□□ 1.43
TOP1MT-216ENST00000522121 SYNE4Q8N205 404 aa24■■□□□ 1.43
TOP1MT-216ENST00000522121 PSMD1Q99460 953 aa24■■□□□ 1.43
TOP1MT-216ENST00000522121 DBF4Q9UBU7 674 aaPredicted RBP24■■□□□ 1.43
TOP1MT-216ENST00000522121 SLC10A5Q5PT55 438 aa23.99■■□□□ 1.43
TOP1MT-216ENST00000522121 DNAJC5GQ8N7S2 189 aa23.99■■□□□ 1.43
TOP1MT-216ENST00000522121 TMX4Q9H1E5 349 aaPredicted RBP23.99■■□□□ 1.43
TOP1MT-216ENST00000522121 MBIPQ9NS73 344 aa23.99■■□□□ 1.43
TOP1MT-216ENST00000522121 IQCA1LA6NCM1 817 aa23.98■■□□□ 1.43
TOP1MT-216ENST00000522121 IARSP41252 1262 aaKnown RBP23.98■■□□□ 1.43
TOP1MT-216ENST00000522121 GNAI1P63096 354 aa23.98■■□□□ 1.43
TOP1MT-216ENST00000522121 DUSP27Q5VZP5 1158 aa23.98■■□□□ 1.43
TOP1MT-216ENST00000522121 NLRP10Q86W26 655 aa23.98■■□□□ 1.43
TOP1MT-216ENST00000522121 IFT57Q9NWB7 429 aa23.98■■□□□ 1.43
TOP1MT-216ENST00000522121 PPEF1O14829 653 aaPredicted RBP23.97■■□□□ 1.43
TOP1MT-216ENST00000522121 C3orf67Q6ZVT6 689 aa23.97■■□□□ 1.43
TOP1MT-216ENST00000522121 PLBD2Q8NHP8 589 aa23.97■■□□□ 1.43
TOP1MT-216ENST00000522121 JDP2Q8WYK2 163 aa23.97■■□□□ 1.43
TOP1MT-216ENST00000522121 HYPKQ9NX55 129 aa23.97■■□□□ 1.43
TOP1MT-216ENST00000522121 TRMT112Q9UI30 125 aaKnown RBP23.97■■□□□ 1.43
TOP1MT-216ENST00000522121 ZNF853P0CG23 659 aa23.96■■□□□ 1.43
TOP1MT-216ENST00000522121 ANKRD13DQ6ZTN6 518 aa23.96■■□□□ 1.43
TOP1MT-216ENST00000522121 TCERG1O14776 1098 aaKnown RBP23.95■■□□□ 1.42
TOP1MT-216ENST00000522121 L3MBTL3Q96JM7 780 aaPredicted RBP23.95■■□□□ 1.42
TOP1MT-216ENST00000522121 SH3TC1Q8TE82 1336 aa23.94■■□□□ 1.42
TOP1MT-216ENST00000522121 HTRA3P83110 453 aa23.94■■□□□ 1.42
TOP1MT-216ENST00000522121 ZNF541Q9H0D2 1346 aa23.93■■□□□ 1.42
TOP1MT-216ENST00000522121 SNED1Q8TER0 1413 aa23.93■■□□□ 1.42
TOP1MT-216ENST00000522121 FZD9O00144 591 aa23.92■■□□□ 1.42
TOP1MT-216ENST00000522121 HCLS1P14317 486 aaPredicted RBP23.92■■□□□ 1.42
TOP1MT-216ENST00000522121 CHADLQ6NUI6 762 aa23.92■■□□□ 1.42
TOP1MT-216ENST00000522121 KLRG1Q96E93 195 aa23.92■■□□□ 1.42
TOP1MT-216ENST00000522121 CHMP4AQ9BY43 222 aa23.91■■□□□ 1.42
TOP1MT-216ENST00000522121 ATP6V0A2Q9Y487 856 aa23.91■■□□□ 1.42
TOP1MT-216ENST00000522121 ABCC4O15439 1325 aa23.9■■□□□ 1.42
TOP1MT-216ENST00000522121 ELL2O00472 640 aaPredicted RBP23.9■■□□□ 1.42
TOP1MT-216ENST00000522121 BBOX1O75936 387 aa23.9■■□□□ 1.42
TOP1MT-216ENST00000522121 EIF6P56537 245 aaKnown RBP23.9■■□□□ 1.42
TOP1MT-216ENST00000522121 DDX46Q7L014 1031 aaKnown RBP23.9■■□□□ 1.42
TOP1MT-216ENST00000522121 GPC2Q8N158 579 aa23.9■■□□□ 1.42
TOP1MT-216ENST00000522121 LARGE2Q8N3Y3 721 aa23.9■■□□□ 1.42
TOP1MT-216ENST00000522121 TAF1DQ9H5J8 278 aaPredicted RBP23.9■■□□□ 1.42
TOP1MT-216ENST00000522121 HACL1Q9UJ83 578 aa23.9■■□□□ 1.42
TOP1MT-216ENST00000522121 ANKRD36CQ5JPF3 1778 aa23.9■■□□□ 1.42
TOP1MT-216ENST00000522121 GOLGA2Q08379 1002 aa23.88■■□□□ 1.41
TOP1MT-216ENST00000522121 CCDC184Q52MB2 194 aa23.88■■□□□ 1.41
TOP1MT-216ENST00000522121 LDHDQ86WU2 507 aa23.88■■□□□ 1.41
TOP1MT-216ENST00000522121 ISCA1Q9BUE6 129 aa23.88■■□□□ 1.41
TOP1MT-216ENST00000522121 ATP5J2-PTCD1G3V325 749 aa23.87■■□□□ 1.41
TOP1MT-216ENST00000522121 POTEIP0CG38 1075 aa23.87■■□□□ 1.41
TOP1MT-216ENST00000522121 POTEJP0CG39 1038 aa23.87■■□□□ 1.41
TOP1MT-216ENST00000522121 RIC3Q7Z5B4 369 aa23.87■■□□□ 1.41
TOP1MT-216ENST00000522121 SUPT20HQ8NEM7 779 aa23.87■■□□□ 1.41
TOP1MT-216ENST00000522121 VPS33BQ9H267 617 aa23.87■■□□□ 1.41
TOP1MT-216ENST00000522121 ZNF316A6NFI3 1004 aaPredicted RBP23.86■■□□□ 1.41
TOP1MT-216ENST00000522121 GRAPQ13588 217 aa23.86■■□□□ 1.41
TOP1MT-216ENST00000522121 EAPPQ56P03 285 aaPredicted RBP23.86■■□□□ 1.41
TOP1MT-216ENST00000522121 SP8Q8IXZ3 490 aa23.86■■□□□ 1.41
TOP1MT-216ENST00000522121 NIM1KQ8IY84 436 aa23.86■■□□□ 1.41
TOP1MT-216ENST00000522121 GRAPLQ8TC17 118 aaPredicted RBP23.86■■□□□ 1.41
TOP1MT-216ENST00000522121 ZNF428Q96B54 188 aa23.86■■□□□ 1.41
TOP1MT-216ENST00000522121 SCN4AP35499 1836 aa23.85■■□□□ 1.41
TOP1MT-216ENST00000522121 PPIP5K2O43314 1243 aa23.85■■□□□ 1.41
TOP1MT-216ENST00000522121 ANP32CO43423 234 aa23.85■■□□□ 1.41
TOP1MT-216ENST00000522121 EPHX2P34913 555 aa23.85■■□□□ 1.41
TOP1MT-216ENST00000522121 TRIM28Q13263 835 aaKnown RBP23.85■■□□□ 1.41
TOP1MT-216ENST00000522121 CCDC30Q5VVM6 783 aa23.85■■□□□ 1.41
TOP1MT-216ENST00000522121 PNMA8AQ86V59 439 aaPredicted RBP23.85■■□□□ 1.41
TOP1MT-216ENST00000522121 C8orf58Q8NAV2 365 aa23.85■■□□□ 1.41
TOP1MT-216ENST00000522121 FAM89AQ96GI7 184 aa23.85■■□□□ 1.41
TOP1MT-216ENST00000522121 GJA3Q9Y6H8 435 aa23.85■■□□□ 1.41
TOP1MT-216ENST00000522121 DPP8Q6V1X1 898 aaPredicted RBP23.84■■□□□ 1.41
TOP1MT-216ENST00000522121 TMC4Q7Z404 712 aa23.84■■□□□ 1.41
TOP1MT-216ENST00000522121 SLC51AQ86UW1 340 aa23.84■■□□□ 1.41
TOP1MT-216ENST00000522121 JMYQ8N9B5 988 aa23.84■■□□□ 1.41
TOP1MT-216ENST00000522121 PHAXQ9H814 394 aaKnown RBP23.84■■□□□ 1.41
TOP1MT-216ENST00000522121 CLEC11AQ9Y240 323 aa23.84■■□□□ 1.41
TOP1MT-216ENST00000522121 CCDC27Q2M243 656 aa23.83■■□□□ 1.41
TOP1MT-216ENST00000522121 MPNDQ8N594 471 aa23.83■■□□□ 1.41
TOP1MT-216ENST00000522121 RTFDC1Q9BY42 306 aaPredicted RBP23.83■■□□□ 1.41
TOP1MT-216ENST00000522121 MRS2Q9HD23 443 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms