RNA–Protein interactions for RNA: ENST00000521738.1

UBLCP1-203, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

TSL 5

Gene UBLCP1, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-203ENST00000521738 USP17L11C9JVI0 530 aa6.86□□□□□ -1.31
UBLCP1-203ENST00000521738 USP17L21D6R901 530 aa6.86□□□□□ -1.31
UBLCP1-203ENST00000521738 USP17L18D6R9N7 530 aa6.86□□□□□ -1.31
UBLCP1-203ENST00000521738 USP17L22D6RA61 530 aa6.86□□□□□ -1.31
UBLCP1-203ENST00000521738 USP17L17D6RBQ6 530 aa6.86□□□□□ -1.31
UBLCP1-203ENST00000521738 USP17L19D6RCP7 530 aa6.86□□□□□ -1.31
UBLCP1-203ENST00000521738 USP17L20D6RJB6 530 aa6.86□□□□□ -1.31
UBLCP1-203ENST00000521738 USP17L24Q0WX57 530 aa6.86□□□□□ -1.31
UBLCP1-203ENST00000521738 TXNRD3Q86VQ6 643 aa6.86□□□□□ -1.31
UBLCP1-203ENST00000521738 TPCN2Q8NHX9 752 aa6.86□□□□□ -1.31
UBLCP1-203ENST00000521738 TNFRSF25Q93038 417 aa6.86□□□□□ -1.31
UBLCP1-203ENST00000521738 IQSEC3Q9UPP2 1182 aaPredicted RBP6.86□□□□□ -1.31
UBLCP1-203ENST00000521738 USP3Q9Y6I4 520 aa6.86□□□□□ -1.31
UBLCP1-203ENST00000521738 ACIN1Q9UKV3 1341 aaKnown RBP6.85□□□□□ -1.31
UBLCP1-203ENST00000521738 TMEM229AB2RXF0 380 aa6.85□□□□□ -1.31
UBLCP1-203ENST00000521738 DKK1O94907 266 aa6.85□□□□□ -1.31
UBLCP1-203ENST00000521738 BICDL1Q6ZP65 573 aa6.85□□□□□ -1.31
UBLCP1-203ENST00000521738 SIX5Q8N196 739 aa6.85□□□□□ -1.31
UBLCP1-203ENST00000521738 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.85□□□□□ -1.31
UBLCP1-203ENST00000521738 TP53INP1Q96A56 240 aa6.85□□□□□ -1.31
UBLCP1-203ENST00000521738 SERTAD1Q9UHV2 236 aa6.85□□□□□ -1.31
UBLCP1-203ENST00000521738 CDK2AP1O14519 115 aa6.84□□□□□ -1.31
UBLCP1-203ENST00000521738 ATG7O95352 703 aa6.84□□□□□ -1.31
UBLCP1-203ENST00000521738 DPYDQ12882 1025 aa6.84□□□□□ -1.31
UBLCP1-203ENST00000521738 TRAPPC3LQ5T215 181 aa6.84□□□□□ -1.31
UBLCP1-203ENST00000521738 C20orf204Q6ZNR8 217 aa6.84□□□□□ -1.31
UBLCP1-203ENST00000521738 ANKMY2Q8IV38 441 aa6.84□□□□□ -1.31
UBLCP1-203ENST00000521738 SLC30A3Q99726 388 aa6.84□□□□□ -1.31
UBLCP1-203ENST00000521738 CABP1Q9NZU7 370 aa6.84□□□□□ -1.31
UBLCP1-203ENST00000521738 RBM19Q9Y4C8 960 aaKnown RBP6.84□□□□□ -1.31
UBLCP1-203ENST00000521738 PARP3Q9Y6F1 533 aa6.84□□□□□ -1.31
UBLCP1-203ENST00000521738 SFI1A8K8P3 1242 aa6.83□□□□□ -1.32
UBLCP1-203ENST00000521738 ELNP15502 786 aa6.83□□□□□ -1.32
UBLCP1-203ENST00000521738 ADH7P40394 386 aa6.83□□□□□ -1.32
UBLCP1-203ENST00000521738 ELOAQ14241 798 aaKnown RBP6.83□□□□□ -1.32
UBLCP1-203ENST00000521738 MTFR1Q15390 333 aa6.83□□□□□ -1.32
UBLCP1-203ENST00000521738 SHISA2Q6UWI4 295 aa6.83□□□□□ -1.32
UBLCP1-203ENST00000521738 LENG1Q96BZ8 264 aaPredicted RBP6.83□□□□□ -1.32
UBLCP1-203ENST00000521738 SLC4A9Q96Q91 983 aa6.83□□□□□ -1.32
UBLCP1-203ENST00000521738 ZNF358Q9NW07 568 aa6.83□□□□□ -1.32
UBLCP1-203ENST00000521738 NOVA2Q9UNW9 492 aaKnown RBP6.83□□□□□ -1.32
UBLCP1-203ENST00000521738 A0A0A0MRY4 1105 aa6.82□□□□□ -1.32
UBLCP1-203ENST00000521738 A6NJY4 79 aa6.82□□□□□ -1.32
UBLCP1-203ENST00000521738 BACH1O14867 736 aa6.82□□□□□ -1.32
UBLCP1-203ENST00000521738 TXLNAP40222 546 aa6.82□□□□□ -1.32
UBLCP1-203ENST00000521738 SEC13P55735 322 aa6.82□□□□□ -1.32
UBLCP1-203ENST00000521738 NRG1Q02297 640 aaPredicted RBP6.82□□□□□ -1.32
UBLCP1-203ENST00000521738 SFSWAPQ12872 951 aaKnown RBP6.82□□□□□ -1.32
UBLCP1-203ENST00000521738 FAM200AQ8TCP9 573 aa6.82□□□□□ -1.32
UBLCP1-203ENST00000521738 ARXQ96QS3 562 aa6.82□□□□□ -1.32
UBLCP1-203ENST00000521738 SSBP4Q9BWG4 385 aaPredicted RBP6.82□□□□□ -1.32
UBLCP1-203ENST00000521738 LRRC69Q6ZNQ3 347 aa6.81□□□□□ -1.32
UBLCP1-203ENST00000521738 KRTAP4-7Q9BYR0 210 aa6.81□□□□□ -1.32
UBLCP1-203ENST00000521738 ZMIZ1Q9ULJ6 1067 aa6.81□□□□□ -1.32
UBLCP1-203ENST00000521738 RNF112Q9ULX5 631 aa6.81□□□□□ -1.32
UBLCP1-203ENST00000521738 COL17A1Q9UMD9 1497 aaPredicted RBP6.8□□□□□ -1.32
UBLCP1-203ENST00000521738 M0R2N6 131 aa6.8□□□□□ -1.32
UBLCP1-203ENST00000521738 PAX4O43316 350 aa6.8□□□□□ -1.32
UBLCP1-203ENST00000521738 LILRB5O75023 590 aa6.8□□□□□ -1.32
UBLCP1-203ENST00000521738 COBLO75128 1261 aa6.8□□□□□ -1.32
UBLCP1-203ENST00000521738 RAB44Q7Z6P3 723 aaPredicted RBP6.8□□□□□ -1.32
UBLCP1-203ENST00000521738 STK32AQ8WU08 396 aa6.8□□□□□ -1.32
UBLCP1-203ENST00000521738 LCE1DQ5T752 114 aa6.79□□□□□ -1.32
UBLCP1-203ENST00000521738 TNS4Q8IZW8 715 aa6.79□□□□□ -1.32
UBLCP1-203ENST00000521738 TSEN2Q8NCE0 465 aaKnown RBP6.79□□□□□ -1.32
UBLCP1-203ENST00000521738 HINFPQ9BQA5 517 aa6.79□□□□□ -1.32
UBLCP1-203ENST00000521738 SPEM2Q0P670 501 aa6.78□□□□□ -1.32
UBLCP1-203ENST00000521738 TMEM164Q5U3C3 297 aa6.78□□□□□ -1.32
UBLCP1-203ENST00000521738 ZDHHC1Q8WTX9 485 aa6.78□□□□□ -1.32
UBLCP1-203ENST00000521738 EML1O00423 815 aa6.77□□□□□ -1.33
UBLCP1-203ENST00000521738 LGR5O75473 907 aa6.77□□□□□ -1.33
UBLCP1-203ENST00000521738 YBX3P16989 372 aaKnown RBP eCLIP6.77□□□□□ -1.33
UBLCP1-203ENST00000521738 TXKP42681 527 aa6.77□□□□□ -1.33
UBLCP1-203ENST00000521738 EPHA4P54764 986 aa6.77□□□□□ -1.33
UBLCP1-203ENST00000521738 RAC1P63000 192 aa6.77□□□□□ -1.33
UBLCP1-203ENST00000521738 NEUROD1Q13562 356 aa6.77□□□□□ -1.33
UBLCP1-203ENST00000521738 C7orf43Q8WVR3 580 aa6.77□□□□□ -1.33
UBLCP1-203ENST00000521738 USP21Q9UK80 565 aa6.77□□□□□ -1.33
UBLCP1-203ENST00000521738 FAM69CQ0P6D2 419 aa6.76□□□□□ -1.33
UBLCP1-203ENST00000521738 L3MBTL2Q969R5 705 aa6.76□□□□□ -1.33
UBLCP1-203ENST00000521738 FMNL2Q96PY5 1086 aa6.76□□□□□ -1.33
UBLCP1-203ENST00000521738 SCHIP1Q9P0W5 487 aaPredicted RBP6.76□□□□□ -1.33
UBLCP1-203ENST00000521738 SWI5Q1ZZU3 235 aa6.75□□□□□ -1.33
UBLCP1-203ENST00000521738 TBCELQ5QJ74 424 aa6.75□□□□□ -1.33
UBLCP1-203ENST00000521738 SLC9A9Q8IVB4 645 aa6.75□□□□□ -1.33
UBLCP1-203ENST00000521738 RETREG2Q8NC44 543 aa6.75□□□□□ -1.33
UBLCP1-203ENST00000521738 TSPAN10Q9H1Z9 355 aaPredicted RBP6.75□□□□□ -1.33
UBLCP1-203ENST00000521738 NEUROD4Q9HD90 331 aa6.75□□□□□ -1.33
UBLCP1-203ENST00000521738 CARNS1A5YM72 827 aa6.74□□□□□ -1.33
UBLCP1-203ENST00000521738 TMEM88BA6NKF7 163 aa6.74□□□□□ -1.33
UBLCP1-203ENST00000521738 FMR1NBQ8N0W7 255 aaPredicted RBP6.74□□□□□ -1.33
UBLCP1-203ENST00000521738 JPH1Q9HDC5 661 aaPredicted RBP6.74□□□□□ -1.33
UBLCP1-203ENST00000521738 PCMTD2Q9NV79 361 aa6.74□□□□□ -1.33
UBLCP1-203ENST00000521738 ATAD2Q6PL18 1390 aa6.73□□□□□ -1.33
UBLCP1-203ENST00000521738 NOS2P35228 1153 aa6.73□□□□□ -1.33
UBLCP1-203ENST00000521738 TEAD4Q15561 434 aa6.73□□□□□ -1.33
UBLCP1-203ENST00000521738 ILDR2Q71H61 639 aa6.73□□□□□ -1.33
UBLCP1-203ENST00000521738 NUDT8Q8WV74 236 aa6.73□□□□□ -1.33
UBLCP1-203ENST00000521738 SCG3Q8WXD2 468 aaKnown RBP6.73□□□□□ -1.33
UBLCP1-203ENST00000521738 BRD7Q9NPI1 651 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms