RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 APLP1P51693 650 aa15.08■□□□□ 0
CSMD1-210ENST00000521646 PPP1R15BQ5SWA1 713 aa15.08■□□□□ 0
CSMD1-210ENST00000521646 CC2D1BQ5T0F9 858 aaKnown RBP15.08■□□□□ 0
CSMD1-210ENST00000521646 CCDC24Q8N4L8 307 aa15.08■□□□□ 0
CSMD1-210ENST00000521646 IL17REQ8NFR9 667 aa15.08■□□□□ 0
CSMD1-210ENST00000521646 CFAP44Q96MT7 982 aa15.08■□□□□ 0
CSMD1-210ENST00000521646 RRAGCQ9HB90 399 aa15.08■□□□□ 0
CSMD1-210ENST00000521646 SCN7AQ01118 1682 aa15.08■□□□□ 0
CSMD1-210ENST00000521646 TNRC6CQ9HCJ0 1690 aaKnown RBP15.08■□□□□ 0
CSMD1-210ENST00000521646 TIAM2Q8IVF5 1701 aa15.08■□□□□ 0
CSMD1-210ENST00000521646 CCDC88AQ3V6T2 1871 aa15.08■□□□□ 0
CSMD1-210ENST00000521646 ZNF316A6NFI3 1004 aaPredicted RBP15.07■□□□□ 0
CSMD1-210ENST00000521646 NFKBIEO00221 500 aa15.07■□□□□ 0
CSMD1-210ENST00000521646 KCNQ3O43525 872 aa15.07■□□□□ 0
CSMD1-210ENST00000521646 TBC1D12O60347 775 aa15.07■□□□□ 0
CSMD1-210ENST00000521646 PAXIP1Q6ZW49 1069 aaPredicted RBP15.07■□□□□ 0
CSMD1-210ENST00000521646 RBM46Q8TBY0 533 aaKnown RBP15.06■□□□□ 0
CSMD1-210ENST00000521646 PTCD2Q8WV60 388 aaKnown RBP15.06■□□□□ 0
CSMD1-210ENST00000521646 ZNF496Q96IT1 587 aaPredicted RBP15.06■□□□□ 0
CSMD1-210ENST00000521646 POTECB2RU33 542 aa15.05■□□□□ -0
CSMD1-210ENST00000521646 SERPINB2P05120 415 aa15.05■□□□□ -0
CSMD1-210ENST00000521646 CANXP27824 592 aaKnown RBP15.05■□□□□ -0
CSMD1-210ENST00000521646 EIF5P55010 431 aaKnown RBP15.05■□□□□ -0
CSMD1-210ENST00000521646 TBC1D9BQ66K14 1250 aa15.05■□□□□ -0
CSMD1-210ENST00000521646 ZPR1O75312 459 aa15.04■□□□□ -0
CSMD1-210ENST00000521646 CNGB1Q14028 1251 aaPredicted RBP15.04■□□□□ -0
CSMD1-210ENST00000521646 BICDL1Q6ZP65 573 aa15.04■□□□□ -0
CSMD1-210ENST00000521646 DDX27Q96GQ7 796 aaKnown RBP15.04■□□□□ -0
CSMD1-210ENST00000521646 PRAMEF22A3QJZ6 481 aa15.03■□□□□ -0
CSMD1-210ENST00000521646 DIAPH1O60610 1272 aaKnown RBP15.03■□□□□ -0
CSMD1-210ENST00000521646 PHACTR3Q96KR7 559 aa15.03■□□□□ -0
CSMD1-210ENST00000521646 FER1L6Q2WGJ9 1857 aa15.02■□□□□ -0
CSMD1-210ENST00000521646 PIP4K2AP48426 406 aaPredicted RBP15.02■□□□□ -0
CSMD1-210ENST00000521646 VSIG10Q8N0Z9 540 aa15.02■□□□□ -0
CSMD1-210ENST00000521646 CCER1Q8TC90 406 aaPredicted RBP15.02■□□□□ -0
CSMD1-210ENST00000521646 LHX6Q9UPM6 363 aa15.02■□□□□ -0
CSMD1-210ENST00000521646 BCORQ6W2J9 1755 aa15.02□□□□□ -0.01
CSMD1-210ENST00000521646 HEG1Q9ULI3 1381 aa15.01□□□□□ -0.01
CSMD1-210ENST00000521646 COL13A1Q5TAT6 717 aaPredicted RBP15.01□□□□□ -0.01
CSMD1-210ENST00000521646 C2CD5Q86YS7 1000 aa15.01□□□□□ -0.01
CSMD1-210ENST00000521646 ZNF687Q8N1G0 1237 aa15.01□□□□□ -0.01
CSMD1-210ENST00000521646 JMYQ8N9B5 988 aa15.01□□□□□ -0.01
CSMD1-210ENST00000521646 KLRG1Q96E93 195 aa15.01□□□□□ -0.01
CSMD1-210ENST00000521646 TBC1D2BQ9UPU7 963 aa15.01□□□□□ -0.01
CSMD1-210ENST00000521646 SLX4Q8IY92 1834 aa15.01□□□□□ -0.01
CSMD1-210ENST00000521646 CEMIPQ8WUJ3 1361 aa15□□□□□ -0.01
CSMD1-210ENST00000521646 CACNA1SQ13698 1873 aa15□□□□□ -0.01
CSMD1-210ENST00000521646 A1BGP04217 495 aa15□□□□□ -0.01
CSMD1-210ENST00000521646 PRR5LQ6MZQ0 368 aa15□□□□□ -0.01
CSMD1-210ENST00000521646 ZNF790Q6PG37 636 aa15□□□□□ -0.01
CSMD1-210ENST00000521646 CAMTA2O94983 1202 aa14.99□□□□□ -0.01
CSMD1-210ENST00000521646 TTLL6Q8N841 843 aa14.99□□□□□ -0.01
CSMD1-210ENST00000521646 KRTAP3-3Q9BYR6 98 aa14.99□□□□□ -0.01
CSMD1-210ENST00000521646 KRTAP3-2Q9BYR7 98 aa14.99□□□□□ -0.01
CSMD1-210ENST00000521646 KDM2BQ8NHM5 1336 aa14.98□□□□□ -0.01
CSMD1-210ENST00000521646 GLTPD2A6NH11 291 aa14.98□□□□□ -0.01
CSMD1-210ENST00000521646 LMNB1P20700 586 aa14.98□□□□□ -0.01
CSMD1-210ENST00000521646 FSTL1Q12841 308 aa14.98□□□□□ -0.01
CSMD1-210ENST00000521646 NPC1L1Q9UHC9 1359 aa14.98□□□□□ -0.01
CSMD1-210ENST00000521646 DICER1Q9UPY3 1922 aaKnown RBP14.98□□□□□ -0.01
CSMD1-210ENST00000521646 U2SURPO15042 1029 aaKnown RBP14.97□□□□□ -0.01
CSMD1-210ENST00000521646 SLC51AQ86UW1 340 aa14.97□□□□□ -0.01
CSMD1-210ENST00000521646 RSPH6AQ9H0K4 717 aa14.97□□□□□ -0.01
CSMD1-210ENST00000521646 USP16Q9Y5T5 823 aa14.97□□□□□ -0.01
CSMD1-210ENST00000521646 C21orf2O43822 256 aa14.96□□□□□ -0.01
CSMD1-210ENST00000521646 ARFGEF2Q9Y6D5 1785 aa14.96□□□□□ -0.02
CSMD1-210ENST00000521646 GNAT3A8MTJ3 354 aa14.95□□□□□ -0.02
CSMD1-210ENST00000521646 OLFM4Q6UX06 510 aa14.95□□□□□ -0.02
CSMD1-210ENST00000521646 C16orf71Q8IYS4 520 aaPredicted RBP14.95□□□□□ -0.02
CSMD1-210ENST00000521646 OXER1Q8TDS5 423 aa14.95□□□□□ -0.02
CSMD1-210ENST00000521646 ZNF330Q9Y3S2 320 aaPredicted RBP14.95□□□□□ -0.02
CSMD1-210ENST00000521646 NBPF26B4DH59 902 aa14.94□□□□□ -0.02
CSMD1-210ENST00000521646 H0YIN7 160 aa14.94□□□□□ -0.02
CSMD1-210ENST00000521646 PRKAR2BP31323 418 aa14.94□□□□□ -0.02
CSMD1-210ENST00000521646 DCTN1Q14203 1278 aa14.94□□□□□ -0.02
CSMD1-210ENST00000521646 MFSD10Q14728 455 aa14.94□□□□□ -0.02
CSMD1-210ENST00000521646 NBPF10Q6P3W6 841 aaKnown RBP14.94□□□□□ -0.02
CSMD1-210ENST00000521646 TTC5Q8N0Z6 440 aa14.94□□□□□ -0.02
CSMD1-210ENST00000521646 NBPF15Q8N660 670 aa14.94□□□□□ -0.02
CSMD1-210ENST00000521646 ZNF622Q969S3 477 aaKnown RBP eCLIP14.94□□□□□ -0.02
CSMD1-210ENST00000521646 ZC3H4Q9UPT8 1303 aaKnown RBP14.93□□□□□ -0.02
CSMD1-210ENST00000521646 STARD3NLO95772 234 aa14.93□□□□□ -0.02
CSMD1-210ENST00000521646 IL6STP40189 918 aaPredicted RBP14.93□□□□□ -0.02
CSMD1-210ENST00000521646 MCM10Q7L590 875 aa14.93□□□□□ -0.02
CSMD1-210ENST00000521646 SPNS2Q8IVW8 549 aa14.93□□□□□ -0.02
CSMD1-210ENST00000521646 SMC1BQ8NDV3 1235 aa14.93□□□□□ -0.02
CSMD1-210ENST00000521646 BRIP1Q9BX63 1249 aa14.93□□□□□ -0.02
CSMD1-210ENST00000521646 SRGNP10124 158 aa14.92□□□□□ -0.02
CSMD1-210ENST00000521646 VEGFAP15692 232 aaPredicted RBP14.92□□□□□ -0.02
CSMD1-210ENST00000521646 TEFQ10587 303 aa14.92□□□□□ -0.02
CSMD1-210ENST00000521646 C7orf43Q8WVR3 580 aa14.92□□□□□ -0.02
CSMD1-210ENST00000521646 COL4A5P29400 1685 aa14.91□□□□□ -0.02
CSMD1-210ENST00000521646 DDNO94850 711 aaPredicted RBP14.91□□□□□ -0.02
CSMD1-210ENST00000521646 PRPF40BQ6NWY9 871 aaKnown RBP14.91□□□□□ -0.02
CSMD1-210ENST00000521646 GAS2L2Q8NHY3 880 aa14.91□□□□□ -0.02
CSMD1-210ENST00000521646 FMNL2Q96PY5 1086 aa14.91□□□□□ -0.02
CSMD1-210ENST00000521646 SNED1Q8TER0 1413 aa14.91□□□□□ -0.02
CSMD1-210ENST00000521646 A0A087WZG4 1122 aa14.9□□□□□ -0.02
CSMD1-210ENST00000521646 BTBD11A6QL63 1104 aa14.9□□□□□ -0.02
CSMD1-210ENST00000521646 DZIP3Q86Y13 1208 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms